RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 UQCRHLA0A096LP55 91 aa15.13■□□□□ 0.01
SLC44A1-202ENST00000374723 SHTN1A0MZ66 631 aa15.13■□□□□ 0.01
SLC44A1-202ENST00000374723 UQCRHP07919 91 aa15.13■□□□□ 0.01
SLC44A1-202ENST00000374723 SPTY2D1Q68D10 685 aaPredicted RBP15.13■□□□□ 0.01
SLC44A1-202ENST00000374723 WDR63Q8IWG1 891 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 MIS18AQ9NYP9 233 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 GRM1Q13255 1194 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 ERICH4A6NGS2 130 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 ZNF354CQ86Y25 554 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 UBXN4Q92575 508 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 C8orf76Q96K31 380 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 CCDC194A0A1B0GVG4 234 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 KIF20AO95235 890 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 GBP3Q9H0R5 595 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 PUS7Q96PZ0 661 aaKnown RBP15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 MCM3P25205 808 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 PRKCSHP14314 528 aaPredicted RBP15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 SMC1AQ14683 1233 aaKnown RBP15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 BOLA2Q9H3K6 86 aa15.12■□□□□ 0.01
SLC44A1-202ENST00000374723 KIF1BPQ96EK5 621 aa15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 MYO1BO43795 1136 aa15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 BICD1Q96G01 975 aa15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 NGLY1Q96IV0 654 aa15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 TTC21AQ8NDW8 1320 aa15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 ZNF213O14771 459 aa15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 USO1O60763 962 aaKnown RBP15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 RAB11FIP3O75154 756 aa15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 CALML4Q96GE6 196 aa15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 ZSCAN12O43309 604 aa15.11■□□□□ 0.01
SLC44A1-202ENST00000374723 ERBINQ96RT1 1412 aa15.1■□□□□ 0.01
SLC44A1-202ENST00000374723 SFPQP23246 707 aaKnown RBP eCLIP15.1■□□□□ 0.013e-6■■□□□ 13
SLC44A1-202ENST00000374723 CCDC83Q8IWF9 413 aa15.1■□□□□ 0.01
SLC44A1-202ENST00000374723 TCERG1LQ5VWI1 586 aa15.1■□□□□ 0.01
SLC44A1-202ENST00000374723 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
SLC44A1-202ENST00000374723 RNF41Q9H4P4 317 aaPredicted RBP15.1■□□□□ 0.01
SLC44A1-202ENST00000374723 STXBP4Q6ZWJ1 553 aa15.1■□□□□ 0.01
SLC44A1-202ENST00000374723 GRPEL1Q9HAV7 217 aa15.1■□□□□ 0.01
SLC44A1-202ENST00000374723 EXOC6BQ9Y2D4 811 aa15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 TOP1P11387 765 aaKnown RBP15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 PRPF4BQ13523 1007 aaKnown RBP15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 GUCY1B3Q02153 619 aa15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 SLC4A8Q2Y0W8 1093 aa15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 VAT1LQ9HCJ6 419 aa15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 SUPT6HQ7KZ85 1726 aaKnown RBP15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 PRC1O43663 620 aa15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 PAFAH1B1P43034 410 aa15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 ZNF622Q969S3 477 aaKnown RBP eCLIP15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 SYNCQ9H7C4 482 aa15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 IFIT3O14879 490 aaKnown RBP15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 CCDC12Q8WUD4 166 aaPredicted RBP15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 CABP5Q9NP86 173 aa15.09■□□□□ 0.01
SLC44A1-202ENST00000374723 ARL1P40616 181 aaPredicted RBP15.08■□□□□ 0.01
SLC44A1-202ENST00000374723 KIF4BQ2VIQ3 1234 aa15.08■□□□□ 0.01
SLC44A1-202ENST00000374723 GLRX3O76003 335 aaKnown RBP15.08■□□□□ 0
SLC44A1-202ENST00000374723 HLA-DOAP06340 250 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 SPECC1Q5M775 1068 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 ANO10Q9NW15 660 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 TMCO5BA8MYB1 307 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 MTIF2P46199 727 aaKnown RBP15.08■□□□□ 0
SLC44A1-202ENST00000374723 CKAP2LQ8IYA6 745 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 LRRC45Q96CN5 670 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 ANKRD30BQ9BXX2 1392 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 FSD2A1L4K1 749 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 AMPD3Q01432 767 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 SLC52A1Q9NWF4 448 aa15.08■□□□□ 0
SLC44A1-202ENST00000374723 PRPF40BQ6NWY9 871 aaKnown RBP15.08■□□□□ 0
SLC44A1-202ENST00000374723 CNNM3Q8NE01 707 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 UTP14AQ9BVJ6 771 aaKnown RBP15.07■□□□□ 0
SLC44A1-202ENST00000374723 NCOA2Q15596 1464 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 HMGB1P09429 215 aaKnown RBP15.07■□□□□ 0
SLC44A1-202ENST00000374723 DUSP27Q5VZP5 1158 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 LRSAM1Q6UWE0 723 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 TCP11L1Q9NUJ3 509 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 HLTFQ14527 1009 aaKnown RBP eCLIP15.07■□□□□ 0
SLC44A1-202ENST00000374723 NOP2P46087 812 aaKnown RBP15.07■□□□□ 0
SLC44A1-202ENST00000374723 PTPN14Q15678 1187 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 IKBKGQ9Y6K9 419 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 KIF5BP33176 963 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 C16orf71Q8IYS4 520 aaPredicted RBP15.07■□□□□ 0
SLC44A1-202ENST00000374723 ALS2CR12Q96Q35 445 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 SYCE3A1L190 88 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 GOLGA8BA8MQT2 603 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 CCDC40Q4G0X9 1142 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 FERMT3Q86UX7 667 aa15.07■□□□□ 0
SLC44A1-202ENST00000374723 BAG3O95817 575 aa15.06■□□□□ 0
SLC44A1-202ENST00000374723 ACTN2P35609 894 aa15.06■□□□□ 0
SLC44A1-202ENST00000374723 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
SLC44A1-202ENST00000374723 CCDC174Q6PII3 467 aa15.06■□□□□ 0
SLC44A1-202ENST00000374723 PPP1R14CQ8TAE6 165 aa15.06■□□□□ 0
SLC44A1-202ENST00000374723 YEATS4O95619 227 aa15.06■□□□□ 0
SLC44A1-202ENST00000374723 ST5P78524 1137 aa15.06■□□□□ 0
SLC44A1-202ENST00000374723 AQRO60306 1485 aaKnown RBP eCLIP15.06■□□□□ 0
SLC44A1-202ENST00000374723 MMRN2Q9H8L6 949 aa15.06■□□□□ 0
SLC44A1-202ENST00000374723 ATAD2Q6PL18 1390 aa15.06■□□□□ 0
SLC44A1-202ENST00000374723 DDX46Q7L014 1031 aaKnown RBP15.06■□□□□ 0
SLC44A1-202ENST00000374723 TMX1Q9H3N1 280 aa15.05■□□□□ 0
SLC44A1-202ENST00000374723 C9orf84Q5VXU9 1444 aa15.05■□□□□ 0
SLC44A1-202ENST00000374723 GOLGA8AA7E2F4 631 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms