RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 NFAT5O94916 1531 aa21.79■■□□□ 1.08
PHF1-201ENST00000374512 RBSNQ9H1K0 784 aa21.79■■□□□ 1.08
PHF1-201ENST00000374512 UBTFL1P0CB47 393 aaPredicted RBP21.78■■□□□ 1.08
PHF1-201ENST00000374512 PRIM1P49642 420 aaKnown RBP21.78■■□□□ 1.08
PHF1-201ENST00000374512 RILPL2Q969X0 211 aa21.78■■□□□ 1.08
PHF1-201ENST00000374512 USP44Q9H0E7 712 aa21.78■■□□□ 1.08
PHF1-201ENST00000374512 LRRFIP2Q9Y608 721 aaKnown RBP21.78■■□□□ 1.08
PHF1-201ENST00000374512 USHBP1Q8N6Y0 703 aa21.78■■□□□ 1.08
PHF1-201ENST00000374512 CEMIPQ8WUJ3 1361 aa21.76■■□□□ 1.07
PHF1-201ENST00000374512 RRP9O43818 475 aaKnown RBP21.76■■□□□ 1.07
PHF1-201ENST00000374512 TERF1P54274 439 aa21.76■■□□□ 1.07
PHF1-201ENST00000374512 HDGFL1Q5TGJ6 251 aa21.76■■□□□ 1.07
PHF1-201ENST00000374512 KCNH5Q8NCM2 988 aa21.76■■□□□ 1.07
PHF1-201ENST00000374512 SYAP1Q96A49 352 aaPredicted RBP21.76■■□□□ 1.07
PHF1-201ENST00000374512 PALD1Q9ULE6 856 aa21.76■■□□□ 1.07
PHF1-201ENST00000374512 PHRF1Q9P1Y6 1649 aaKnown RBP21.76■■□□□ 1.07
PHF1-201ENST00000374512 OFD1O75665 1012 aa21.75■■□□□ 1.07
PHF1-201ENST00000374512 TMEM63CQ9P1W3 806 aa21.75■■□□□ 1.07
PHF1-201ENST00000374512 NOL7Q9UMY1 257 aaKnown RBP21.75■■□□□ 1.07
PHF1-201ENST00000374512 MCM5P33992 734 aa21.75■■□□□ 1.07
PHF1-201ENST00000374512 TSHZ3Q63HK5 1081 aa21.75■■□□□ 1.07
PHF1-201ENST00000374512 HOXB7P09629 217 aa21.74■■□□□ 1.07
PHF1-201ENST00000374512 HSPA4P34932 840 aa21.74■■□□□ 1.07
PHF1-201ENST00000374512 POLA2Q14181 598 aa21.74■■□□□ 1.07
PHF1-201ENST00000374512 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.74■■□□□ 1.07
PHF1-201ENST00000374512 PLEKHG5O94827 1062 aa21.74■■□□□ 1.07
PHF1-201ENST00000374512 MED1Q15648 1581 aaPredicted RBP21.73■■□□□ 1.07
PHF1-201ENST00000374512 WDR33Q9C0J8 1336 aaKnown RBP21.73■■□□□ 1.07
PHF1-201ENST00000374512 NBPF6Q5VWK0 638 aa21.72■■□□□ 1.07
PHF1-201ENST00000374512 NBPF4Q96M43 638 aa21.72■■□□□ 1.07
PHF1-201ENST00000374512 RBM27Q9P2N5 1060 aaKnown RBP21.72■■□□□ 1.07
PHF1-201ENST00000374512 ZNF500O60304 480 aaPredicted RBP21.72■■□□□ 1.07
PHF1-201ENST00000374512 PHF14O94880 888 aa21.72■■□□□ 1.07
PHF1-201ENST00000374512 HSP90AB4PQ58FF6 505 aa21.72■■□□□ 1.07
PHF1-201ENST00000374512 KDM3BQ7LBC6 1761 aa21.71■■□□□ 1.07
PHF1-201ENST00000374512 KIF1BPQ96EK5 621 aa21.71■■□□□ 1.07
PHF1-201ENST00000374512 KLHL34Q8N239 644 aa21.71■■□□□ 1.07
PHF1-201ENST00000374512 SYCE3A1L190 88 aa21.7■■□□□ 1.06
PHF1-201ENST00000374512 PHAXQ9H814 394 aaKnown RBP21.7■■□□□ 1.06
PHF1-201ENST00000374512 LMO7Q8WWI1 1683 aa21.7■■□□□ 1.06
PHF1-201ENST00000374512 EIF4A1P60842 406 aaKnown RBP21.7■■□□□ 1.06
PHF1-201ENST00000374512 UNC5CLQ8IV45 518 aa21.7■■□□□ 1.06
PHF1-201ENST00000374512 ORAI2Q96SN7 254 aa21.7■■□□□ 1.06
PHF1-201ENST00000374512 HSP90AA2PQ14568 343 aaPredicted RBP21.69■■□□□ 1.06
PHF1-201ENST00000374512 PPP1R42Q7Z4L9 355 aa21.69■■□□□ 1.06
PHF1-201ENST00000374512 RHPN1Q8TCX5 695 aa21.69■■□□□ 1.06
PHF1-201ENST00000374512 RGPD2P0DJD1 1756 aa21.69■■□□□ 1.06
PHF1-201ENST00000374512 RAD50Q92878 1312 aa21.69■■□□□ 1.06
PHF1-201ENST00000374512 SGSM2O43147 1006 aa21.68■■□□□ 1.06
PHF1-201ENST00000374512 SURF6O75683 361 aaKnown RBP21.68■■□□□ 1.06
PHF1-201ENST00000374512 CCDC39Q9UFE4 941 aa21.68■■□□□ 1.06
PHF1-201ENST00000374512 SLIT3O75094 1523 aa21.68■■□□□ 1.06
PHF1-201ENST00000374512 GLIPR1L2Q4G1C9 344 aa21.68■■□□□ 1.06
PHF1-201ENST00000374512 CNTROBQ8N137 903 aa21.68■■□□□ 1.06
PHF1-201ENST00000374512 PI4K2BQ8TCG2 481 aa21.68■■□□□ 1.06
PHF1-201ENST00000374512 USP42Q9H9J4 1324 aaKnown RBP21.68■■□□□ 1.06
PHF1-201ENST00000374512 EIF2S2P20042 333 aaKnown RBP21.67■■□□□ 1.06
PHF1-201ENST00000374512 AKAP4Q5JQC9 854 aa21.67■■□□□ 1.06
PHF1-201ENST00000374512 TMEM87AQ8NBN3 555 aa21.67■■□□□ 1.06
PHF1-201ENST00000374512 LGR6Q9HBX8 967 aa21.67■■□□□ 1.06
PHF1-201ENST00000374512 NSFL1CQ9UNZ2 370 aaKnown RBP21.67■■□□□ 1.06
PHF1-201ENST00000374512 KIAA1211Q6ZU35 1233 aa21.67■■□□□ 1.06
PHF1-201ENST00000374512 PROSER2Q86WR7 435 aaPredicted RBP21.66■■□□□ 1.06
PHF1-201ENST00000374512 TSPY26PQ9H489 355 aa21.66■■□□□ 1.06
PHF1-201ENST00000374512 IL1RAPL2Q9NP60 686 aa21.66■■□□□ 1.06
PHF1-201ENST00000374512 ZKSCAN5Q9Y2L8 839 aa21.66■■□□□ 1.06
PHF1-201ENST00000374512 KIF1AQ12756 1690 aa21.66■■□□□ 1.06
PHF1-201ENST00000374512 CRYBG1Q9Y4K1 1723 aa21.66■■□□□ 1.06
PHF1-201ENST00000374512 ZBTB7CA1YPR0 619 aa21.65■■□□□ 1.06
PHF1-201ENST00000374512 TEFQ10587 303 aa21.65■■□□□ 1.06
PHF1-201ENST00000374512 PLEKHO1Q53GL0 409 aaPredicted RBP21.65■■□□□ 1.06
PHF1-201ENST00000374512 UPF3BQ9BZI7 483 aaKnown RBP21.65■■□□□ 1.06
PHF1-201ENST00000374512 TTC41PQ6P2S7 1318 aa21.65■■□□□ 1.06
PHF1-201ENST00000374512 TRPM3Q9HCF6 1732 aaPredicted RBP21.65■■□□□ 1.06
PHF1-201ENST00000374512 GCP02774 474 aa21.65■■□□□ 1.06
PHF1-201ENST00000374512 CSPP1Q1MSJ5 1256 aa21.65■■□□□ 1.06
PHF1-201ENST00000374512 FOXD4L5Q5VV16 416 aaPredicted RBP21.65■■□□□ 1.06
PHF1-201ENST00000374512 FAM184AQ8NB25 1140 aa21.65■■□□□ 1.06
PHF1-201ENST00000374512 FOXD4L4Q8WXT5 416 aaPredicted RBP21.65■■□□□ 1.06
PHF1-201ENST00000374512 SRGAP3O43295 1099 aa21.64■■□□□ 1.06
PHF1-201ENST00000374512 ZNF530Q6P9A1 599 aaPredicted RBP21.64■■□□□ 1.06
PHF1-201ENST00000374512 ARHGEF25Q86VW2 580 aa21.64■■□□□ 1.06
PHF1-201ENST00000374512 NUTM1Q86Y26 1132 aa21.64■■□□□ 1.06
PHF1-201ENST00000374512 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.05
PHF1-201ENST00000374512 CHPF2Q9P2E5 772 aa21.64■■□□□ 1.05
PHF1-201ENST00000374512 HDAC5Q9UQL6 1122 aa21.64■■□□□ 1.05
PHF1-201ENST00000374512 BEND3Q5T5X7 828 aa21.63■■□□□ 1.05
PHF1-201ENST00000374512 DNAAF4Q8WXU2 420 aa21.63■■□□□ 1.05
PHF1-201ENST00000374512 TTC14Q96N46 770 aa21.63■■□□□ 1.05
PHF1-201ENST00000374512 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.63■■□□□ 1.05
PHF1-201ENST00000374512 BTBD11A6QL63 1104 aa21.63■■□□□ 1.05
PHF1-201ENST00000374512 LETM1O95202 739 aaPredicted RBP21.63■■□□□ 1.05
PHF1-201ENST00000374512 NCAPD2Q15021 1401 aa21.63■■□□□ 1.05
PHF1-201ENST00000374512 UVSSAQ2YD98 709 aa21.63■■□□□ 1.05
PHF1-201ENST00000374512 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
PHF1-201ENST00000374512 CHAMP1Q96JM3 812 aa21.63■■□□□ 1.05
PHF1-201ENST00000374512 LSG1Q9H089 658 aaKnown RBP21.63■■□□□ 1.05
PHF1-201ENST00000374512 SNX14Q9Y5W7 946 aa21.63■■□□□ 1.05
PHF1-201ENST00000374512 C1orf167Q5SNV9 1468 aa21.62■■□□□ 1.05
PHF1-201ENST00000374512 XPCQ01831 940 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms