RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 USP21Q9UK80 565 aa19.9■□□□□ 0.78
NIPAL3-204ENST00000374399 BCL9O00512 1426 aa19.89■□□□□ 0.78
NIPAL3-204ENST00000374399 LRP10Q7Z4F1 713 aa19.89■□□□□ 0.77
NIPAL3-204ENST00000374399 CHMP4AQ9BY43 222 aa19.89■□□□□ 0.77
NIPAL3-204ENST00000374399 THSD7AQ9UPZ6 1657 aa19.88■□□□□ 0.77
NIPAL3-204ENST00000374399 SKAP1Q86WV1 359 aa19.88■□□□□ 0.77
NIPAL3-204ENST00000374399 TMOD3Q9NYL9 352 aa19.88■□□□□ 0.77
NIPAL3-204ENST00000374399 PXDNLA1KZ92 1463 aa19.88■□□□□ 0.77
NIPAL3-204ENST00000374399 FAM98CQ17RN3 349 aaKnown RBP19.88■□□□□ 0.77
NIPAL3-204ENST00000374399 DDX21Q9NR30 783 aaKnown RBP eCLIP19.88■□□□□ 0.77
NIPAL3-204ENST00000374399 ATG3Q9NT62 314 aa19.87■□□□□ 0.77
NIPAL3-204ENST00000374399 ASAP1Q9ULH1 1129 aa19.87■□□□□ 0.77
NIPAL3-204ENST00000374399 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
NIPAL3-204ENST00000374399 ADCY9O60503 1353 aa19.86■□□□□ 0.77
NIPAL3-204ENST00000374399 C1orf115Q9H7X2 142 aa19.85■□□□□ 0.77
NIPAL3-204ENST00000374399 AFF2P51816 1311 aa19.85■□□□□ 0.77
NIPAL3-204ENST00000374399 CCT4P50991 539 aaKnown RBP19.85■□□□□ 0.77
NIPAL3-204ENST00000374399 HDAC1Q13547 482 aaPredicted RBP19.85■□□□□ 0.77
NIPAL3-204ENST00000374399 SLC4A10Q6U841 1118 aa19.85■□□□□ 0.77
NIPAL3-204ENST00000374399 PELP1Q8IZL8 1130 aaKnown RBP19.85■□□□□ 0.77
NIPAL3-204ENST00000374399 MEIS3Q99687 375 aa19.84■□□□□ 0.77
NIPAL3-204ENST00000374399 HYPKQ9NX55 129 aa19.84■□□□□ 0.77
NIPAL3-204ENST00000374399 ATRNO75882 1429 aa19.83■□□□□ 0.77
NIPAL3-204ENST00000374399 PI4KAP2A4QPH2 592 aa19.83■□□□□ 0.77
NIPAL3-204ENST00000374399 PTCD1O75127 700 aaKnown RBP19.83■□□□□ 0.77
NIPAL3-204ENST00000374399 PRIM1P49642 420 aaKnown RBP19.83■□□□□ 0.77
NIPAL3-204ENST00000374399 MEX3CQ5U5Q3 659 aaKnown RBP19.83■□□□□ 0.77
NIPAL3-204ENST00000374399 SIRT2Q8IXJ6 389 aa19.83■□□□□ 0.77
NIPAL3-204ENST00000374399 PI4KAP1Q8N8J0 262 aa19.83■□□□□ 0.77
NIPAL3-204ENST00000374399 ATP10DQ9P241 1426 aa19.83■□□□□ 0.76
NIPAL3-204ENST00000374399 CHMP4BQ9H444 224 aaKnown RBP19.82■□□□□ 0.76
NIPAL3-204ENST00000374399 NBPF26B4DH59 902 aa19.82■□□□□ 0.76
NIPAL3-204ENST00000374399 PIP4K2AP48426 406 aaPredicted RBP19.82■□□□□ 0.76
NIPAL3-204ENST00000374399 NBPF14Q5TI25 921 aa19.82■□□□□ 0.76
NIPAL3-204ENST00000374399 NBPF10Q6P3W6 841 aaKnown RBP19.82■□□□□ 0.76
NIPAL3-204ENST00000374399 NBPF15Q8N660 670 aa19.82■□□□□ 0.76
NIPAL3-204ENST00000374399 SLC4A9Q96Q91 983 aa19.82■□□□□ 0.76
NIPAL3-204ENST00000374399 RWDD1Q9H446 243 aaPredicted RBP19.82■□□□□ 0.76
NIPAL3-204ENST00000374399 BEND3Q5T5X7 828 aa19.8■□□□□ 0.76
NIPAL3-204ENST00000374399 DNAAF4Q8WXU2 420 aa19.8■□□□□ 0.76
NIPAL3-204ENST00000374399 GJD4Q96KN9 370 aaPredicted RBP19.8■□□□□ 0.76
NIPAL3-204ENST00000374399 MYL6BP14649 208 aa19.79■□□□□ 0.76
NIPAL3-204ENST00000374399 KSR2Q6VAB6 950 aa19.79■□□□□ 0.76
NIPAL3-204ENST00000374399 TJP1Q07157 1748 aa19.79■□□□□ 0.76
NIPAL3-204ENST00000374399 ERBB4Q15303 1308 aa19.78■□□□□ 0.76
NIPAL3-204ENST00000374399 ONECUT3O60422 494 aaPredicted RBP19.78■□□□□ 0.76
NIPAL3-204ENST00000374399 VSIG10Q8N0Z9 540 aa19.78■□□□□ 0.76
NIPAL3-204ENST00000374399 XAGE3Q8WTP9 111 aa19.78■□□□□ 0.76
NIPAL3-204ENST00000374399 SYTL4Q96C24 671 aaPredicted RBP19.78■□□□□ 0.76
NIPAL3-204ENST00000374399 ACSBG1Q96GR2 724 aa19.78■□□□□ 0.76
NIPAL3-204ENST00000374399 USP44Q9H0E7 712 aa19.78■□□□□ 0.76
NIPAL3-204ENST00000374399 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
NIPAL3-204ENST00000374399 COPS6Q7L5N1 327 aa19.77■□□□□ 0.76
NIPAL3-204ENST00000374399 SMC5Q8IY18 1101 aa19.77■□□□□ 0.76
NIPAL3-204ENST00000374399 A1BGP04217 495 aa19.76■□□□□ 0.75
NIPAL3-204ENST00000374399 AIMP1Q12904 312 aaKnown RBP19.76■□□□□ 0.75
NIPAL3-204ENST00000374399 DNAJC10Q8IXB1 793 aa19.76■□□□□ 0.75
NIPAL3-204ENST00000374399 TSHZ2Q9NRE2 1034 aa19.76■□□□□ 0.75
NIPAL3-204ENST00000374399 KCNQ2O43526 872 aa19.76■□□□□ 0.75
NIPAL3-204ENST00000374399 CEP85Q6P2H3 762 aa19.76■□□□□ 0.75
NIPAL3-204ENST00000374399 ARFGEF2Q9Y6D5 1785 aa19.76■□□□□ 0.75
NIPAL3-204ENST00000374399 SRCIN1Q9C0H9 1055 aa19.75■□□□□ 0.75
NIPAL3-204ENST00000374399 TRPC5Q9UL62 973 aaPredicted RBP19.75■□□□□ 0.75
NIPAL3-204ENST00000374399 NUP188Q5SRE5 1749 aa19.74■□□□□ 0.75
NIPAL3-204ENST00000374399 ANKRD44Q8N8A2 993 aa19.74■□□□□ 0.75
NIPAL3-204ENST00000374399 PDZRN3Q9UPQ7 1066 aa19.74■□□□□ 0.75
NIPAL3-204ENST00000374399 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
NIPAL3-204ENST00000374399 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
NIPAL3-204ENST00000374399 DDX58O95786 925 aaKnown RBP19.72■□□□□ 0.75
NIPAL3-204ENST00000374399 PTF1AQ7RTS3 328 aa19.72■□□□□ 0.75
NIPAL3-204ENST00000374399 RPAP2Q8IXW5 612 aaPredicted RBP19.72■□□□□ 0.75
NIPAL3-204ENST00000374399 IGKV5-2P06315 115 aa19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 GNAI3P08754 354 aa19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 NBPF7P0C2Y1 421 aaPredicted RBP19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 CWF19L2Q2TBE0 894 aaKnown RBP19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 ANKRD13DQ6ZTN6 518 aa19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 TEX13AQ9BXU3 409 aaPredicted RBP19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 QTRT2Q9H974 415 aaKnown RBP19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 ALDH1L1O75891 902 aa19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 GNAI2P04899 355 aa19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 CYP19A1P11511 503 aaPredicted RBP19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 TTLL7Q6ZT98 887 aa19.71■□□□□ 0.75
NIPAL3-204ENST00000374399 SBF2Q86WG5 1849 aa19.71■□□□□ 0.74
NIPAL3-204ENST00000374399 NHSQ6T4R5 1651 aa19.7■□□□□ 0.74
NIPAL3-204ENST00000374399 A0A0G2JS52 829 aa19.7■□□□□ 0.74
NIPAL3-204ENST00000374399 MYT1Q01538 1121 aa19.7■□□□□ 0.74
NIPAL3-204ENST00000374399 RIC3Q7Z5B4 369 aa19.7■□□□□ 0.74
NIPAL3-204ENST00000374399 LINS1Q8NG48 757 aa19.7■□□□□ 0.74
NIPAL3-204ENST00000374399 METTL22Q9BUU2 404 aaPredicted RBP19.7■□□□□ 0.74
NIPAL3-204ENST00000374399 IBTKQ9P2D0 1353 aaPredicted RBP19.7■□□□□ 0.74
NIPAL3-204ENST00000374399 FAM182BQ5T319 152 aa19.69■□□□□ 0.74
NIPAL3-204ENST00000374399 LRRFIP2Q9Y608 721 aaKnown RBP19.69■□□□□ 0.74
NIPAL3-204ENST00000374399 SEPT12Q8IYM1 358 aa19.68■□□□□ 0.74
NIPAL3-204ENST00000374399 PLBD2Q8NHP8 589 aa19.68■□□□□ 0.74
NIPAL3-204ENST00000374399 DCTPP1Q9H773 170 aa19.68■□□□□ 0.74
NIPAL3-204ENST00000374399 RREB1Q92766 1687 aa19.68■□□□□ 0.74
NIPAL3-204ENST00000374399 BTAF1O14981 1849 aa19.68■□□□□ 0.74
NIPAL3-204ENST00000374399 PDE4AP27815 886 aa19.68■□□□□ 0.74
NIPAL3-204ENST00000374399 RGS3P49796 1198 aa19.68■□□□□ 0.74
NIPAL3-204ENST00000374399 NUCB1Q02818 461 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms