RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
PRPF4-202ENST00000374199 ANP32EQ9BTT0 268 aa15.73■□□□□ 0.11
PRPF4-202ENST00000374199 ERVV-2B6SEH9 535 aa15.73■□□□□ 0.11
PRPF4-202ENST00000374199 SSH3Q8TE77 659 aa15.73■□□□□ 0.11
PRPF4-202ENST00000374199 DDX21Q9NR30 783 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRPF4-202ENST00000374199 ZBTB7CA1YPR0 619 aa15.72■□□□□ 0.11
PRPF4-202ENST00000374199 FKBP5Q13451 457 aaPredicted RBP15.72■□□□□ 0.11
PRPF4-202ENST00000374199 HYPKQ9NX55 129 aa15.72■□□□□ 0.11
PRPF4-202ENST00000374199 ERBB4Q15303 1308 aa15.72■□□□□ 0.11
PRPF4-202ENST00000374199 ALDH1L1O75891 902 aa15.71■□□□□ 0.11
PRPF4-202ENST00000374199 LNPKQ9C0E8 428 aa15.71■□□□□ 0.11
PRPF4-202ENST00000374199 DNAAF4Q8WXU2 420 aa15.71■□□□□ 0.11
PRPF4-202ENST00000374199 PRDM11Q9NQV5 511 aa15.7■□□□□ 0.1
PRPF4-202ENST00000374199 GSPT1P15170 499 aaKnown RBP15.7■□□□□ 0.1
PRPF4-202ENST00000374199 RBM25P49756 843 aaKnown RBP15.7■□□□□ 0.1
PRPF4-202ENST00000374199 PROSER3Q2NL68 480 aa15.7■□□□□ 0.1
PRPF4-202ENST00000374199 KSR2Q6VAB6 950 aa15.7■□□□□ 0.1
PRPF4-202ENST00000374199 PRAMEF22A3QJZ6 481 aa15.7■□□□□ 0.1
PRPF4-202ENST00000374199 ANKRD45Q5TZF3 282 aa15.7■□□□□ 0.1
PRPF4-202ENST00000374199 DOT1LQ8TEK3 1739 aa15.69■□□□□ 0.1
PRPF4-202ENST00000374199 HMMRO75330 724 aa15.69■□□□□ 0.1
PRPF4-202ENST00000374199 NFATC2IPQ8NCF5 419 aa15.69■□□□□ 0.1
PRPF4-202ENST00000374199 IL2RBP14784 551 aa15.68■□□□□ 0.1
PRPF4-202ENST00000374199 ANKRD36CQ5JPF3 1778 aa15.68■□□□□ 0.1
PRPF4-202ENST00000374199 AOX1Q06278 1338 aa15.68■□□□□ 0.1
PRPF4-202ENST00000374199 TTC22Q5TAA0 569 aa15.68■□□□□ 0.1
PRPF4-202ENST00000374199 ZCRB1Q8TBF4 217 aaKnown RBP15.68■□□□□ 0.1
PRPF4-202ENST00000374199 SRCIN1Q9C0H9 1055 aa15.68■□□□□ 0.1
PRPF4-202ENST00000374199 SLIT2O94813 1529 aa15.68■□□□□ 0.1
PRPF4-202ENST00000374199 STAP2Q9UGK3 403 aa15.68■□□□□ 0.1
PRPF4-202ENST00000374199 PNMA6EA0A0J9YXQ4 647 aa15.67■□□□□ 0.1
PRPF4-202ENST00000374199 ZNF496Q96IT1 587 aaPredicted RBP15.67■□□□□ 0.1
PRPF4-202ENST00000374199 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
PRPF4-202ENST00000374199 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
PRPF4-202ENST00000374199 USP42Q9H9J4 1324 aaKnown RBP15.67■□□□□ 0.1
PRPF4-202ENST00000374199 LARP1Q6PKG0 1096 aaKnown RBP15.66■□□□□ 0.1
PRPF4-202ENST00000374199 SNRPA1P09661 255 aaKnown RBP15.66■□□□□ 0.1
PRPF4-202ENST00000374199 CSB-PGBD3P0DP91 1061 aa15.65■□□□□ 0.1
PRPF4-202ENST00000374199 SLC4A10Q6U841 1118 aa15.65■□□□□ 0.1
PRPF4-202ENST00000374199 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
PRPF4-202ENST00000374199 AK9Q5TCS8 1911 aa15.65■□□□□ 0.1
PRPF4-202ENST00000374199 LRRFIP2Q9Y608 721 aaKnown RBP15.65■□□□□ 0.1
PRPF4-202ENST00000374199 LINS1Q8NG48 757 aa15.64■□□□□ 0.09
PRPF4-202ENST00000374199 NECTIN2Q92692 538 aa15.64■□□□□ 0.09
PRPF4-202ENST00000374199 FMNL2Q96PY5 1086 aa15.64■□□□□ 0.09
PRPF4-202ENST00000374199 IL17RAQ96F46 866 aa15.64■□□□□ 0.09
PRPF4-202ENST00000374199 KAZALD1Q96I82 304 aa15.64■□□□□ 0.09
PRPF4-202ENST00000374199 COL5A3P25940 1745 aaPredicted RBP15.63■□□□□ 0.09
PRPF4-202ENST00000374199 NBPF7P0C2Y1 421 aaPredicted RBP15.63■□□□□ 0.09
PRPF4-202ENST00000374199 BCL9O00512 1426 aa15.63■□□□□ 0.09
PRPF4-202ENST00000374199 RAB11FIP3O75154 756 aa15.63■□□□□ 0.09
PRPF4-202ENST00000374199 UBTFL1P0CB47 393 aaPredicted RBP15.63■□□□□ 0.09
PRPF4-202ENST00000374199 EIF2S2P20042 333 aaKnown RBP15.63■□□□□ 0.09
PRPF4-202ENST00000374199 TOM1L2Q6ZVM7 507 aa15.63■□□□□ 0.09
PRPF4-202ENST00000374199 MAP3K2Q9Y2U5 619 aa15.63■□□□□ 0.09
PRPF4-202ENST00000374199 IGKV5-2P06315 115 aa15.62■□□□□ 0.09
PRPF4-202ENST00000374199 SLC39A6Q13433 755 aa15.62■□□□□ 0.09
PRPF4-202ENST00000374199 TBC1D9Q6ZT07 1266 aa15.62■□□□□ 0.09
PRPF4-202ENST00000374199 KIF2CQ99661 725 aa15.62■□□□□ 0.09
PRPF4-202ENST00000374199 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
PRPF4-202ENST00000374199 OTUD7AQ8TE49 926 aaPredicted RBP15.61■□□□□ 0.09
PRPF4-202ENST00000374199 THSD7AQ9UPZ6 1657 aa15.61■□□□□ 0.09
PRPF4-202ENST00000374199 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
PRPF4-202ENST00000374199 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
PRPF4-202ENST00000374199 METTL22Q9BUU2 404 aaPredicted RBP15.6■□□□□ 0.09
PRPF4-202ENST00000374199 PDE1AP54750 535 aa15.6■□□□□ 0.09
PRPF4-202ENST00000374199 CASP7P55210 303 aa15.6■□□□□ 0.09
PRPF4-202ENST00000374199 CABP4P57796 275 aa15.6■□□□□ 0.09
PRPF4-202ENST00000374199 NPM2Q86SE8 214 aaKnown RBP15.6■□□□□ 0.09
PRPF4-202ENST00000374199 CDC45O75419 566 aa15.6■□□□□ 0.09
PRPF4-202ENST00000374199 LRRCC1Q9C099 1032 aa15.6■□□□□ 0.09
PRPF4-202ENST00000374199 USP16Q9Y5T5 823 aa15.6■□□□□ 0.09
PRPF4-202ENST00000374199 DDX58O95786 925 aaKnown RBP15.59■□□□□ 0.09
PRPF4-202ENST00000374199 ANXA1P04083 346 aa15.59■□□□□ 0.09
PRPF4-202ENST00000374199 C22orf23Q9BZE7 217 aa15.59■□□□□ 0.09
PRPF4-202ENST00000374199 THRAP3Q9Y2W1 955 aaKnown RBP15.59■□□□□ 0.09
PRPF4-202ENST00000374199 NEURL1BA8MQ27 555 aa15.58■□□□□ 0.09
PRPF4-202ENST00000374199 PPP1R42Q7Z4L9 355 aa15.58■□□□□ 0.09
PRPF4-202ENST00000374199 NBPF26B4DH59 902 aa15.58■□□□□ 0.08
PRPF4-202ENST00000374199 NBPF14Q5TI25 921 aa15.58■□□□□ 0.08
PRPF4-202ENST00000374199 NBPF10Q6P3W6 841 aaKnown RBP15.58■□□□□ 0.08
PRPF4-202ENST00000374199 NBPF15Q8N660 670 aa15.58■□□□□ 0.08
PRPF4-202ENST00000374199 RABL6Q3YEC7 729 aaPredicted RBP15.58■□□□□ 0.08
PRPF4-202ENST00000374199 SNX21Q969T3 373 aa15.58■□□□□ 0.08
PRPF4-202ENST00000374199 HDAC5Q9UQL6 1122 aa15.58■□□□□ 0.08
PRPF4-202ENST00000374199 LAMB2P55268 1798 aa15.58■□□□□ 0.08
PRPF4-202ENST00000374199 BCORQ6W2J9 1755 aa15.58■□□□□ 0.08
PRPF4-202ENST00000374199 GRM8O00222 908 aa15.57■□□□□ 0.08
PRPF4-202ENST00000374199 ANTXR1Q9H6X2 564 aa15.57■□□□□ 0.08
PRPF4-202ENST00000374199 BTG4Q9NY30 223 aa15.57■□□□□ 0.08
PRPF4-202ENST00000374199 SMARCA5O60264 1052 aaPredicted RBP15.57■□□□□ 0.08
PRPF4-202ENST00000374199 UPF2Q9HAU5 1272 aaKnown RBP15.57■□□□□ 0.08
PRPF4-202ENST00000374199 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
PRPF4-202ENST00000374199 SDSP20132 328 aa15.56■□□□□ 0.08
PRPF4-202ENST00000374199 GCKRQ14397 625 aa15.56■□□□□ 0.08
PRPF4-202ENST00000374199 TTC5Q8N0Z6 440 aa15.56■□□□□ 0.08
PRPF4-202ENST00000374199 PLBD2Q8NHP8 589 aa15.56■□□□□ 0.08
PRPF4-202ENST00000374199 SPATA31A1Q5TZJ5 1347 aa15.56■□□□□ 0.08
PRPF4-202ENST00000374199 EPB41L2O43491 1005 aaKnown RBP15.56■□□□□ 0.08
PRPF4-202ENST00000374199 XAGE3Q8WTP9 111 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms