RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 NFATC2IPQ8NCF5 419 aa20.34■□□□□ 0.85
CDKN1A-202ENST00000373711 HSPA1AP0DMV8 641 aaKnown RBP20.33■□□□□ 0.85
CDKN1A-202ENST00000373711 HSPA1BP0DMV9 641 aaKnown RBP20.33■□□□□ 0.85
CDKN1A-202ENST00000373711 DICER1Q9UPY3 1922 aaKnown RBP20.32■□□□□ 0.84
CDKN1A-202ENST00000373711 RASSF7Q02833 373 aa20.32■□□□□ 0.84
CDKN1A-202ENST00000373711 USPL1Q5W0Q7 1092 aa20.32■□□□□ 0.84
CDKN1A-202ENST00000373711 INTS5Q6P9B9 1019 aaKnown RBP20.31■□□□□ 0.84
CDKN1A-202ENST00000373711 TTLL6Q8N841 843 aa20.31■□□□□ 0.84
CDKN1A-202ENST00000373711 POLR3GLQ9BT43 218 aa20.31■□□□□ 0.84
CDKN1A-202ENST00000373711 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
CDKN1A-202ENST00000373711 DPY19L2Q6NUT2 758 aa20.3■□□□□ 0.84
CDKN1A-202ENST00000373711 NARFQ9UHQ1 456 aa20.29■□□□□ 0.84
CDKN1A-202ENST00000373711 COL15A1P39059 1388 aa20.29■□□□□ 0.84
CDKN1A-202ENST00000373711 H0YIN7 160 aa20.27■□□□□ 0.84
CDKN1A-202ENST00000373711 NFIXQ14938 502 aa20.27■□□□□ 0.84
CDKN1A-202ENST00000373711 AKAP4Q5JQC9 854 aa20.27■□□□□ 0.84
CDKN1A-202ENST00000373711 DNAJC10Q8IXB1 793 aa20.27■□□□□ 0.84
CDKN1A-202ENST00000373711 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
CDKN1A-202ENST00000373711 MRC1P22897 1456 aa20.26■□□□□ 0.83
CDKN1A-202ENST00000373711 SERPINB2P05120 415 aa20.26■□□□□ 0.83
CDKN1A-202ENST00000373711 SULT6B1Q6IMI4 303 aa20.26■□□□□ 0.83
CDKN1A-202ENST00000373711 AEBP1Q8IUX7 1158 aa20.26■□□□□ 0.83
CDKN1A-202ENST00000373711 SLC52A2Q9HAB3 445 aa20.26■□□□□ 0.83
CDKN1A-202ENST00000373711 C2CD5Q86YS7 1000 aa20.25■□□□□ 0.83
CDKN1A-202ENST00000373711 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
CDKN1A-202ENST00000373711 CYP19A1P11511 503 aaPredicted RBP20.24■□□□□ 0.83
CDKN1A-202ENST00000373711 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
CDKN1A-202ENST00000373711 MORC1Q86VD1 984 aa20.23■□□□□ 0.83
CDKN1A-202ENST00000373711 UBR2Q8IWV8 1755 aa20.22■□□□□ 0.83
CDKN1A-202ENST00000373711 VSIG10Q8N0Z9 540 aa20.22■□□□□ 0.83
CDKN1A-202ENST00000373711 CREBZFQ9NS37 354 aa20.22■□□□□ 0.83
CDKN1A-202ENST00000373711 A0A087WZG4 1122 aa20.21■□□□□ 0.83
CDKN1A-202ENST00000373711 NFKBIEO00221 500 aa20.21■□□□□ 0.83
CDKN1A-202ENST00000373711 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
CDKN1A-202ENST00000373711 ANKRD31Q8N7Z5 1873 aa20.21■□□□□ 0.83
CDKN1A-202ENST00000373711 SCN7AQ01118 1682 aa20.2■□□□□ 0.82
CDKN1A-202ENST00000373711 PDE6BP35913 854 aa20.2■□□□□ 0.82
CDKN1A-202ENST00000373711 ERFEQ4G0M1 354 aa20.2■□□□□ 0.82
CDKN1A-202ENST00000373711 PANK3Q9H999 370 aa20.2■□□□□ 0.82
CDKN1A-202ENST00000373711 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
CDKN1A-202ENST00000373711 CHADLQ6NUI6 762 aa20.19■□□□□ 0.82
CDKN1A-202ENST00000373711 ARFGEF2Q9Y6D5 1785 aa20.18■□□□□ 0.82
CDKN1A-202ENST00000373711 RNMTO43148 476 aaKnown RBP20.18■□□□□ 0.82
CDKN1A-202ENST00000373711 STARD3NLO95772 234 aa20.18■□□□□ 0.82
CDKN1A-202ENST00000373711 ZNF622Q969S3 477 aaKnown RBP eCLIP20.18■□□□□ 0.82
CDKN1A-202ENST00000373711 COL11A2P13942 1736 aaPredicted RBP20.18■□□□□ 0.82
CDKN1A-202ENST00000373711 CARMIL3Q8ND23 1372 aa20.18■□□□□ 0.82
CDKN1A-202ENST00000373711 SCN4AP35499 1836 aa20.18■□□□□ 0.82
CDKN1A-202ENST00000373711 IL13P35225 146 aa20.17■□□□□ 0.82
CDKN1A-202ENST00000373711 SLC39A6Q13433 755 aa20.17■□□□□ 0.82
CDKN1A-202ENST00000373711 TTC5Q8N0Z6 440 aa20.17■□□□□ 0.82
CDKN1A-202ENST00000373711 BCL2L12Q9HB09 334 aa20.17■□□□□ 0.82
CDKN1A-202ENST00000373711 LTBP3Q9NS15 1303 aa20.17■□□□□ 0.82
CDKN1A-202ENST00000373711 POTECB2RU33 542 aa20.16■□□□□ 0.82
CDKN1A-202ENST00000373711 SOGA3Q5TF21 947 aa20.16■□□□□ 0.82
CDKN1A-202ENST00000373711 BICDL1Q6ZP65 573 aa20.16■□□□□ 0.82
CDKN1A-202ENST00000373711 BRIP1Q9BX63 1249 aa20.16■□□□□ 0.82
CDKN1A-202ENST00000373711 TAOK3Q9H2K8 898 aa20.16■□□□□ 0.82
CDKN1A-202ENST00000373711 IQCA1LA6NCM1 817 aa20.15■□□□□ 0.82
CDKN1A-202ENST00000373711 NPHP1O15259 732 aa20.15■□□□□ 0.82
CDKN1A-202ENST00000373711 CANXP27824 592 aaKnown RBP20.15■□□□□ 0.82
CDKN1A-202ENST00000373711 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
CDKN1A-202ENST00000373711 AIDAQ96BJ3 306 aa20.15■□□□□ 0.82
CDKN1A-202ENST00000373711 LGR6Q9HBX8 967 aa20.15■□□□□ 0.82
CDKN1A-202ENST00000373711 MKRN1Q9UHC7 482 aaKnown RBP20.15■□□□□ 0.82
CDKN1A-202ENST00000373711 C21orf2O43822 256 aa20.14■□□□□ 0.81
CDKN1A-202ENST00000373711 CCER1Q8TC90 406 aaPredicted RBP20.14■□□□□ 0.81
CDKN1A-202ENST00000373711 KNSTRNQ9Y448 316 aa20.14■□□□□ 0.81
CDKN1A-202ENST00000373711 EIF4G2P78344 907 aaKnown RBP eCLIP20.13■□□□□ 0.811e-7■■■□□ 17.9
CDKN1A-202ENST00000373711 CNKSR1Q969H4 720 aa20.13■□□□□ 0.81
CDKN1A-202ENST00000373711 TEX13AQ9BXU3 409 aaPredicted RBP20.13■□□□□ 0.81
CDKN1A-202ENST00000373711 PRDM10Q9NQV6 1147 aa20.13■□□□□ 0.81
CDKN1A-202ENST00000373711 CNTNAP1P78357 1384 aa20.12■□□□□ 0.81
CDKN1A-202ENST00000373711 EIF5P55010 431 aaKnown RBP20.12■□□□□ 0.81
CDKN1A-202ENST00000373711 ST5P78524 1137 aa20.11■□□□□ 0.81
CDKN1A-202ENST00000373711 LDHDQ86WU2 507 aa20.11■□□□□ 0.81
CDKN1A-202ENST00000373711 ZNF219Q9P2Y4 722 aaPredicted RBP20.11■□□□□ 0.81
CDKN1A-202ENST00000373711 SLX4Q8IY92 1834 aa20.11■□□□□ 0.81
CDKN1A-202ENST00000373711 CTCFP49711 727 aaPredicted RBP20.1■□□□□ 0.81
CDKN1A-202ENST00000373711 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
CDKN1A-202ENST00000373711 PRR5LQ6MZQ0 368 aa20.1■□□□□ 0.81
CDKN1A-202ENST00000373711 CNBD1Q8NA66 436 aa20.1■□□□□ 0.81
CDKN1A-202ENST00000373711 BCORQ6W2J9 1755 aa20.09■□□□□ 0.81
CDKN1A-202ENST00000373711 STYK1Q6J9G0 422 aa20.09■□□□□ 0.81
CDKN1A-202ENST00000373711 FOXN1O15353 648 aa20.08■□□□□ 0.81
CDKN1A-202ENST00000373711 DDNO94850 711 aaPredicted RBP20.08■□□□□ 0.81
CDKN1A-202ENST00000373711 HMOX1P09601 288 aa20.08■□□□□ 0.81
CDKN1A-202ENST00000373711 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.81
CDKN1A-202ENST00000373711 SETDB2Q96T68 719 aa20.08■□□□□ 0.81
CDKN1A-202ENST00000373711 ZNF330Q9Y3S2 320 aaPredicted RBP20.08■□□□□ 0.81
CDKN1A-202ENST00000373711 MTHFSDQ2M296 383 aaKnown RBP20.07■□□□□ 0.8
CDKN1A-202ENST00000373711 MASTLQ96GX5 879 aa20.07■□□□□ 0.8
CDKN1A-202ENST00000373711 SIPA1L3O60292 1781 aaPredicted RBP20.07■□□□□ 0.8
CDKN1A-202ENST00000373711 HEG1Q9ULI3 1381 aa20.07■□□□□ 0.8
CDKN1A-202ENST00000373711 PASKQ96RG2 1323 aa20.06■□□□□ 0.8
CDKN1A-202ENST00000373711 CLSPNQ9HAW4 1339 aa20.06■□□□□ 0.8
CDKN1A-202ENST00000373711 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
CDKN1A-202ENST00000373711 TEFQ10587 303 aa20.06■□□□□ 0.8
CDKN1A-202ENST00000373711 PRPF40BQ6NWY9 871 aaKnown RBP20.06■□□□□ 0.8
CDKN1A-202ENST00000373711 L3MBTL3Q96JM7 780 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms