RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 TMEM87AQ8NBN3 555 aa13.16□□□□□ -0.3
LCN2-202ENST00000372998 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
LCN2-202ENST00000372998 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
LCN2-202ENST00000372998 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
LCN2-202ENST00000372998 RGPD8O14715 1765 aaPredicted RBP13.16□□□□□ -0.3
LCN2-202ENST00000372998 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
LCN2-202ENST00000372998 LMO7Q8WWI1 1683 aa13.15□□□□□ -0.3
LCN2-202ENST00000372998 NLRP6P59044 892 aa13.15□□□□□ -0.3
LCN2-202ENST00000372998 POLA2Q14181 598 aa13.15□□□□□ -0.3
LCN2-202ENST00000372998 HSP90AA2PQ14568 343 aaPredicted RBP13.15□□□□□ -0.3
LCN2-202ENST00000372998 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
LCN2-202ENST00000372998 KCNH5Q8NCM2 988 aa13.15□□□□□ -0.3
LCN2-202ENST00000372998 EXOC6BQ9Y2D4 811 aa13.15□□□□□ -0.3
LCN2-202ENST00000372998 MARF1Q9Y4F3 1742 aaKnown RBP13.15□□□□□ -0.3
LCN2-202ENST00000372998 CRYBG1Q9Y4K1 1723 aa13.15□□□□□ -0.3
LCN2-202ENST00000372998 CHD2O14647 1828 aaKnown RBP13.15□□□□□ -0.3
LCN2-202ENST00000372998 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
LCN2-202ENST00000372998 F6X3S4 739 aa13.14□□□□□ -0.31
LCN2-202ENST00000372998 ALDH1L1O75891 902 aa13.14□□□□□ -0.31
LCN2-202ENST00000372998 GLRX3O76003 335 aaKnown RBP13.14□□□□□ -0.31
LCN2-202ENST00000372998 TPM3P06753 285 aa13.14□□□□□ -0.31
LCN2-202ENST00000372998 ZGPATQ8N5A5 531 aaKnown RBP13.14□□□□□ -0.31
LCN2-202ENST00000372998 SH2B1Q9NRF2 756 aaPredicted RBP13.14□□□□□ -0.31
LCN2-202ENST00000372998 NWD1Q149M9 1564 aa13.14□□□□□ -0.31
LCN2-202ENST00000372998 LTN1O94822 1766 aa13.14□□□□□ -0.31
LCN2-202ENST00000372998 RAD50Q92878 1312 aa13.13□□□□□ -0.31
LCN2-202ENST00000372998 CEMIPQ8WUJ3 1361 aa13.13□□□□□ -0.31
LCN2-202ENST00000372998 LTKP29376 864 aa13.13□□□□□ -0.31
LCN2-202ENST00000372998 AMOTQ4VCS5 1084 aa13.13□□□□□ -0.31
LCN2-202ENST00000372998 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
LCN2-202ENST00000372998 USP44Q9H0E7 712 aa13.13□□□□□ -0.31
LCN2-202ENST00000372998 ZKSCAN5Q9Y2L8 839 aa13.13□□□□□ -0.31
LCN2-202ENST00000372998 ZDHHC9Q9Y397 364 aa13.13□□□□□ -0.31
LCN2-202ENST00000372998 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
LCN2-202ENST00000372998 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
LCN2-202ENST00000372998 PRIM1P49642 420 aaKnown RBP13.12□□□□□ -0.31
LCN2-202ENST00000372998 MTX1Q13505 466 aa13.12□□□□□ -0.31
LCN2-202ENST00000372998 RHPN1Q8TCX5 695 aa13.12□□□□□ -0.31
LCN2-202ENST00000372998 GPT2Q8TD30 523 aa13.12□□□□□ -0.31
LCN2-202ENST00000372998 RBSNQ9H1K0 784 aa13.12□□□□□ -0.31
LCN2-202ENST00000372998 LIMCH1Q9UPQ0 1083 aa13.12□□□□□ -0.31
LCN2-202ENST00000372998 PNMA6EA0A0J9YXQ4 647 aa13.11□□□□□ -0.31
LCN2-202ENST00000372998 SGSM2O43147 1006 aa13.11□□□□□ -0.31
LCN2-202ENST00000372998 FOXO3O43524 673 aa13.11□□□□□ -0.31
LCN2-202ENST00000372998 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
LCN2-202ENST00000372998 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
LCN2-202ENST00000372998 CCDC183Q5T5S1 534 aa13.11□□□□□ -0.31
LCN2-202ENST00000372998 CLASRPQ8N2M8 674 aaKnown RBP13.11□□□□□ -0.31
LCN2-202ENST00000372998 IP6K1Q92551 441 aa13.11□□□□□ -0.31
LCN2-202ENST00000372998 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
LCN2-202ENST00000372998 ERBB4Q15303 1308 aa13.11□□□□□ -0.31
LCN2-202ENST00000372998 PLEKHG2Q9H7P9 1386 aa13.1□□□□□ -0.31
LCN2-202ENST00000372998 UBE2HP62256 183 aa13.1□□□□□ -0.31
LCN2-202ENST00000372998 AKAP4Q5JQC9 854 aa13.1□□□□□ -0.31
LCN2-202ENST00000372998 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
LCN2-202ENST00000372998 DNAAF4Q8WXU2 420 aa13.1□□□□□ -0.31
LCN2-202ENST00000372998 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
LCN2-202ENST00000372998 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
LCN2-202ENST00000372998 PSMA5P28066 241 aa13.09□□□□□ -0.31
LCN2-202ENST00000372998 ANKRD1Q15327 319 aa13.09□□□□□ -0.31
LCN2-202ENST00000372998 VPS53Q5VIR6 699 aa13.09□□□□□ -0.31
LCN2-202ENST00000372998 PPP1R42Q7Z4L9 355 aa13.09□□□□□ -0.31
LCN2-202ENST00000372998 TICAM2Q86XR7 235 aa13.09□□□□□ -0.31
LCN2-202ENST00000372998 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
LCN2-202ENST00000372998 DIAPH3Q9NSV4 1193 aa13.09□□□□□ -0.31
LCN2-202ENST00000372998 TMEM63CQ9P1W3 806 aa13.09□□□□□ -0.31
LCN2-202ENST00000372998 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
LCN2-202ENST00000372998 SMC3Q9UQE7 1217 aa13.09□□□□□ -0.31
LCN2-202ENST00000372998 SYCE3A1L190 88 aa13.08□□□□□ -0.32
LCN2-202ENST00000372998 SRGAP3O43295 1099 aa13.08□□□□□ -0.32
LCN2-202ENST00000372998 PTMAP06454 111 aaKnown RBP13.08□□□□□ -0.32
LCN2-202ENST00000372998 ZSCAN22P10073 491 aaPredicted RBP13.08□□□□□ -0.32
LCN2-202ENST00000372998 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
LCN2-202ENST00000372998 ZKSCAN1P17029 563 aaPredicted RBP13.08□□□□□ -0.32
LCN2-202ENST00000372998 PDCP20941 246 aa13.08□□□□□ -0.32
LCN2-202ENST00000372998 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
LCN2-202ENST00000372998 TEFQ10587 303 aa13.08□□□□□ -0.32
LCN2-202ENST00000372998 PI4K2BQ8TCG2 481 aa13.08□□□□□ -0.32
LCN2-202ENST00000372998 KCNB2Q92953 911 aa13.08□□□□□ -0.32
LCN2-202ENST00000372998 CHMP4CQ96CF2 233 aa13.08□□□□□ -0.32
LCN2-202ENST00000372998 SLC26A8Q96RN1 970 aa13.08□□□□□ -0.32
LCN2-202ENST00000372998 SOX12O15370 315 aa13.07□□□□□ -0.32
LCN2-202ENST00000372998 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
LCN2-202ENST00000372998 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
LCN2-202ENST00000372998 PKP1Q13835 747 aa13.07□□□□□ -0.32
LCN2-202ENST00000372998 RNF20Q5VTR2 975 aa13.07□□□□□ -0.32
LCN2-202ENST00000372998 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
LCN2-202ENST00000372998 ECHDC1Q9NTX5 307 aa13.07□□□□□ -0.32
LCN2-202ENST00000372998 HYPKQ9NX55 129 aa13.07□□□□□ -0.32
LCN2-202ENST00000372998 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
LCN2-202ENST00000372998 DYNC1I1O14576 645 aa13.06□□□□□ -0.32
LCN2-202ENST00000372998 STX6O43752 255 aa13.06□□□□□ -0.32
LCN2-202ENST00000372998 HMGN5P82970 282 aaKnown RBP13.06□□□□□ -0.32
LCN2-202ENST00000372998 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
LCN2-202ENST00000372998 BEND3Q5T5X7 828 aa13.06□□□□□ -0.32
LCN2-202ENST00000372998 TTC14Q96N46 770 aa13.06□□□□□ -0.32
LCN2-202ENST00000372998 LSG1Q9H089 658 aaKnown RBP13.06□□□□□ -0.32
LCN2-202ENST00000372998 ALDH8A1Q9H2A2 487 aaPredicted RBP13.06□□□□□ -0.32
LCN2-202ENST00000372998 SNX14Q9Y5W7 946 aa13.06□□□□□ -0.32
LCN2-202ENST00000372998 CYP46A1Q9Y6A2 500 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms