RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 CARD10Q9BWT7 1032 aa16.57■□□□□ 0.24
CSTF2-201ENST00000372972 SCN11AQ9UI33 1791 aa16.56■□□□□ 0.24
CSTF2-201ENST00000372972 LRRCC1Q9C099 1032 aa16.56■□□□□ 0.24
CSTF2-201ENST00000372972 OSBPL3Q9H4L5 887 aa16.56■□□□□ 0.24
CSTF2-201ENST00000372972 EXOC6BQ9Y2D4 811 aa16.56■□□□□ 0.24
CSTF2-201ENST00000372972 COL22A1Q8NFW1 1626 aaPredicted RBP16.56■□□□□ 0.24
CSTF2-201ENST00000372972 PARP4Q9UKK3 1724 aaKnown RBP16.55■□□□□ 0.24
CSTF2-201ENST00000372972 ANXA1P04083 346 aa16.55■□□□□ 0.24
CSTF2-201ENST00000372972 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
CSTF2-201ENST00000372972 PHLPP1O60346 1717 aa16.54■□□□□ 0.24
CSTF2-201ENST00000372972 IBTKQ9P2D0 1353 aaPredicted RBP16.54■□□□□ 0.24
CSTF2-201ENST00000372972 SDSP20132 328 aa16.54■□□□□ 0.24
CSTF2-201ENST00000372972 DEKP35659 375 aaKnown RBP16.54■□□□□ 0.24
CSTF2-201ENST00000372972 SLKQ9H2G2 1235 aaPredicted RBP16.54■□□□□ 0.24
CSTF2-201ENST00000372972 ANTXR1Q9H6X2 564 aa16.54■□□□□ 0.24
CSTF2-201ENST00000372972 BTG4Q9NY30 223 aa16.54■□□□□ 0.24
CSTF2-201ENST00000372972 ADCY9O60503 1353 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 TOM1O60784 492 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 PDE1AP54750 535 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 ZNF790Q6PG37 636 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 SSH3Q8TE77 659 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 HYPKQ9NX55 129 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 CASC1Q6TDU7 716 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 ZCRB1Q8TBF4 217 aaKnown RBP16.53■□□□□ 0.24
CSTF2-201ENST00000372972 SNX21Q969T3 373 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 DCAF5Q96JK2 942 aa16.53■□□□□ 0.24
CSTF2-201ENST00000372972 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.24
CSTF2-201ENST00000372972 COL14A1Q05707 1796 aaKnown RBP16.52■□□□□ 0.24
CSTF2-201ENST00000372972 IL2RBP14784 551 aa16.52■□□□□ 0.24
CSTF2-201ENST00000372972 KSR2Q6VAB6 950 aa16.52■□□□□ 0.24
CSTF2-201ENST00000372972 NFATC2IPQ8NCF5 419 aa16.52■□□□□ 0.24
CSTF2-201ENST00000372972 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
CSTF2-201ENST00000372972 HSP90AB1P08238 724 aaKnown RBP16.51■□□□□ 0.23
CSTF2-201ENST00000372972 NBPF7P0C2Y1 421 aaPredicted RBP16.51■□□□□ 0.23
CSTF2-201ENST00000372972 POLA2Q14181 598 aa16.51■□□□□ 0.23
CSTF2-201ENST00000372972 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
CSTF2-201ENST00000372972 KIF2CQ99661 725 aa16.51■□□□□ 0.23
CSTF2-201ENST00000372972 RAB11FIP3O75154 756 aa16.51■□□□□ 0.23
CSTF2-201ENST00000372972 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
CSTF2-201ENST00000372972 PPP1R42Q7Z4L9 355 aa16.51■□□□□ 0.23
CSTF2-201ENST00000372972 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
CSTF2-201ENST00000372972 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
CSTF2-201ENST00000372972 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
CSTF2-201ENST00000372972 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
CSTF2-201ENST00000372972 PCDH11XQ9BZA7 1347 aa16.5■□□□□ 0.23
CSTF2-201ENST00000372972 PCDH11YQ9BZA8 1340 aa16.5■□□□□ 0.23
CSTF2-201ENST00000372972 FRAT2O75474 233 aaPredicted RBP16.49■□□□□ 0.23
CSTF2-201ENST00000372972 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
CSTF2-201ENST00000372972 MRC1P22897 1456 aa16.49■□□□□ 0.23
CSTF2-201ENST00000372972 STAP2Q9UGK3 403 aa16.49■□□□□ 0.23
CSTF2-201ENST00000372972 HDAC5Q9UQL6 1122 aa16.49■□□□□ 0.23
CSTF2-201ENST00000372972 SRGAP3O43295 1099 aa16.48■□□□□ 0.23
CSTF2-201ENST00000372972 MX1P20591 662 aa16.48■□□□□ 0.23
CSTF2-201ENST00000372972 PDIA6Q15084 440 aa16.48■□□□□ 0.23
CSTF2-201ENST00000372972 UBAP1LF5GYI3 381 aa16.47■□□□□ 0.23
CSTF2-201ENST00000372972 SURF6O75683 361 aaKnown RBP16.47■□□□□ 0.23
CSTF2-201ENST00000372972 SPRYD3Q8NCJ5 442 aa16.47■□□□□ 0.23
CSTF2-201ENST00000372972 USP26Q9BXU7 913 aa16.47■□□□□ 0.23
CSTF2-201ENST00000372972 C9orf78Q9NZ63 289 aaPredicted RBP16.47■□□□□ 0.23
CSTF2-201ENST00000372972 CABP4P57796 275 aa16.47■□□□□ 0.23
CSTF2-201ENST00000372972 SHANK3Q9BYB0 1731 aa16.47■□□□□ 0.23
CSTF2-201ENST00000372972 ADAMTS2O95450 1211 aa16.46■□□□□ 0.23
CSTF2-201ENST00000372972 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
CSTF2-201ENST00000372972 LINS1Q8NG48 757 aa16.46■□□□□ 0.23
CSTF2-201ENST00000372972 DDX54Q8TDD1 881 aaKnown RBP16.46■□□□□ 0.23
CSTF2-201ENST00000372972 REC8O95072 547 aa16.46■□□□□ 0.22
CSTF2-201ENST00000372972 MTX1Q13505 466 aa16.46■□□□□ 0.22
CSTF2-201ENST00000372972 NKX1-1Q15270 411 aaPredicted RBP16.46■□□□□ 0.22
CSTF2-201ENST00000372972 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.22
CSTF2-201ENST00000372972 ZNF496Q96IT1 587 aaPredicted RBP16.46■□□□□ 0.22
CSTF2-201ENST00000372972 AOX1Q06278 1338 aa16.45■□□□□ 0.22
CSTF2-201ENST00000372972 SNRPA1P09661 255 aaKnown RBP16.45■□□□□ 0.22
CSTF2-201ENST00000372972 AIMP1Q12904 312 aaKnown RBP16.45■□□□□ 0.22
CSTF2-201ENST00000372972 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
CSTF2-201ENST00000372972 CHMP5Q9NZZ3 219 aa16.45■□□□□ 0.22
CSTF2-201ENST00000372972 ERC2O15083 957 aa16.44■□□□□ 0.22
CSTF2-201ENST00000372972 RHPN1Q8TCX5 695 aa16.44■□□□□ 0.22
CSTF2-201ENST00000372972 NUTM2BA6NNL0 878 aaPredicted RBP16.44■□□□□ 0.22
CSTF2-201ENST00000372972 NUTM2EB1AL46 878 aaPredicted RBP16.44■□□□□ 0.22
CSTF2-201ENST00000372972 CWF19L2Q2TBE0 894 aaKnown RBP16.44■□□□□ 0.22
CSTF2-201ENST00000372972 TSHZ3Q63HK5 1081 aa16.44■□□□□ 0.22
CSTF2-201ENST00000372972 NUTM2AQ8IVF1 878 aaPredicted RBP16.44■□□□□ 0.22
CSTF2-201ENST00000372972 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
CSTF2-201ENST00000372972 IL1RAPL2Q9NP60 686 aa16.44■□□□□ 0.22
CSTF2-201ENST00000372972 RABEP1Q15276 862 aa16.43■□□□□ 0.22
CSTF2-201ENST00000372972 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
CSTF2-201ENST00000372972 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
CSTF2-201ENST00000372972 UTYO14607 1347 aa16.42■□□□□ 0.22
CSTF2-201ENST00000372972 ERVV-2B6SEH9 535 aa16.42■□□□□ 0.22
CSTF2-201ENST00000372972 GRM8O00222 908 aa16.42■□□□□ 0.22
CSTF2-201ENST00000372972 MYL6BP14649 208 aa16.42■□□□□ 0.22
CSTF2-201ENST00000372972 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
CSTF2-201ENST00000372972 C5P01031 1676 aa16.42■□□□□ 0.22
CSTF2-201ENST00000372972 USP16Q9Y5T5 823 aa16.42■□□□□ 0.22
CSTF2-201ENST00000372972 DISP2A7MBM2 1401 aa16.42■□□□□ 0.22
CSTF2-201ENST00000372972 TRIM6-TRIM34B2RNG4 842 aa16.41■□□□□ 0.22
CSTF2-201ENST00000372972 K7ELQ4 463 aaPredicted RBP16.41■□□□□ 0.22
CSTF2-201ENST00000372972 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms