RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 USP8P40818 1118 aa12.54□□□□□ -0.4
TRERF1-203ENST00000372917 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
TRERF1-203ENST00000372917 GIMAP6Q6P9H5 292 aa12.54□□□□□ -0.4
TRERF1-203ENST00000372917 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
TRERF1-203ENST00000372917 CCT2P78371 535 aaKnown RBP12.53□□□□□ -0.4
TRERF1-203ENST00000372917 NUTM2DQ5VT03 806 aaPredicted RBP12.53□□□□□ -0.4
TRERF1-203ENST00000372917 JAKMIP3Q5VZ66 844 aa12.53□□□□□ -0.4
TRERF1-203ENST00000372917 ARMCX6Q7L4S7 300 aa12.53□□□□□ -0.4
TRERF1-203ENST00000372917 PBRM1Q86U86 1689 aa12.53□□□□□ -0.4
TRERF1-203ENST00000372917 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
TRERF1-203ENST00000372917 TRIM5Q9C035 493 aa12.53□□□□□ -0.4
TRERF1-203ENST00000372917 PLEKHA4Q9H4M7 779 aa12.53□□□□□ -0.4
TRERF1-203ENST00000372917 H2AFXP16104 143 aaPredicted RBP12.53□□□□□ -0.4
TRERF1-203ENST00000372917 DHX8Q14562 1220 aaKnown RBP12.53□□□□□ -0.4
TRERF1-203ENST00000372917 KDM5DQ9BY66 1539 aa12.53□□□□□ -0.4
TRERF1-203ENST00000372917 DISP1Q96F81 1524 aa12.52□□□□□ -0.4
TRERF1-203ENST00000372917 ST18O60284 1047 aa12.52□□□□□ -0.4
TRERF1-203ENST00000372917 CORO7P57737 925 aa12.52□□□□□ -0.4
TRERF1-203ENST00000372917 C11orf91Q3C1V1 193 aa12.52□□□□□ -0.4
TRERF1-203ENST00000372917 NOL8Q76FK4 1167 aaKnown RBP12.52□□□□□ -0.4
TRERF1-203ENST00000372917 FILIP1Q7Z7B0 1213 aa12.52□□□□□ -0.4
TRERF1-203ENST00000372917 MIEF2Q96C03 454 aa12.52□□□□□ -0.4
TRERF1-203ENST00000372917 PLB1Q6P1J6 1458 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.41
TRERF1-203ENST00000372917 EIF2AK4Q9P2K8 1649 aaKnown RBP12.52□□□□□ -0.41
TRERF1-203ENST00000372917 PSMD2Q13200 908 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 TBC1D9Q6ZT07 1266 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 UBXN4Q92575 508 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 NUP160Q12769 1436 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 FAM135AQ9P2D6 1515 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 ANKRD45Q5TZF3 282 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 TADA2BQ86TJ2 420 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 EXOC4Q96A65 974 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 PIK3C2GO75747 1445 aa12.52□□□□□ -0.41
TRERF1-203ENST00000372917 ARMC3Q5W041 872 aa12.51□□□□□ -0.41
TRERF1-203ENST00000372917 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
TRERF1-203ENST00000372917 USP48Q86UV5 1035 aa12.51□□□□□ -0.41
TRERF1-203ENST00000372917 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
TRERF1-203ENST00000372917 THOC1Q96FV9 657 aaKnown RBP12.51□□□□□ -0.41
TRERF1-203ENST00000372917 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
TRERF1-203ENST00000372917 APBB1O00213 710 aa12.51□□□□□ -0.41
TRERF1-203ENST00000372917 IRX1P78414 480 aaPredicted RBP12.51□□□□□ -0.41
TRERF1-203ENST00000372917 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
TRERF1-203ENST00000372917 CROCC2H7BZ55 1655 aa12.51□□□□□ -0.41
TRERF1-203ENST00000372917 RDXP35241 583 aaKnown RBP12.51□□□□□ -0.41
TRERF1-203ENST00000372917 FMNL3Q8IVF7 1028 aa12.51□□□□□ -0.41
TRERF1-203ENST00000372917 EFCAB13Q8IY85 973 aa12.51□□□□□ -0.41
TRERF1-203ENST00000372917 TRMT2AQ8IZ69 625 aaKnown RBP12.51□□□□□ -0.41
TRERF1-203ENST00000372917 N4BP2L2Q92802 583 aaPredicted RBP12.51□□□□□ -0.41
TRERF1-203ENST00000372917 ZSCAN16Q9H4T2 348 aaPredicted RBP12.51□□□□□ -0.41
TRERF1-203ENST00000372917 TRPM1Q7Z4N2 1603 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 USP27XA6NNY8 438 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 CTAGE5O15320 804 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 SYTL4Q96C24 671 aaPredicted RBP12.5□□□□□ -0.41
TRERF1-203ENST00000372917 PTPRGP23470 1445 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRERF1-203ENST00000372917 PDE6BP35913 854 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 LIG3P49916 1009 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 VEZTQ9HBM0 779 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 VPS18Q9P253 973 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 RPS6KL1Q9Y6S9 549 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 ERLIN2O94905 339 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 NF2P35240 595 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 ZNF428Q96B54 188 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 A2MP01023 1474 aa12.5□□□□□ -0.41
TRERF1-203ENST00000372917 TARBP1Q13395 1621 aaKnown RBP12.49□□□□□ -0.41
TRERF1-203ENST00000372917 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
TRERF1-203ENST00000372917 INHBEP58166 350 aa12.49□□□□□ -0.41
TRERF1-203ENST00000372917 GNL3LQ9NVN8 582 aaKnown RBP12.49□□□□□ -0.41
TRERF1-203ENST00000372917 ETAA1Q9NY74 926 aa12.49□□□□□ -0.41
TRERF1-203ENST00000372917 ASXL1Q8IXJ9 1541 aa12.49□□□□□ -0.41
TRERF1-203ENST00000372917 KIF3BO15066 747 aa12.49□□□□□ -0.41
TRERF1-203ENST00000372917 FAXDC2Q96IV6 333 aa12.49□□□□□ -0.41
TRERF1-203ENST00000372917 CFAP65Q6ZU64 1925 aaKnown RBP12.49□□□□□ -0.41
TRERF1-203ENST00000372917 CCDC141Q6ZP82 1450 aa12.49□□□□□ -0.41
TRERF1-203ENST00000372917 MX1P20591 662 aa12.49□□□□□ -0.41
TRERF1-203ENST00000372917 ELF1P32519 619 aa12.49□□□□□ -0.41
TRERF1-203ENST00000372917 GNL2Q13823 731 aaKnown RBP12.49□□□□□ -0.41
TRERF1-203ENST00000372917 PLEKHO1Q53GL0 409 aaPredicted RBP12.49□□□□□ -0.41
TRERF1-203ENST00000372917 FAM210AQ96ND0 272 aa12.49□□□□□ -0.41
TRERF1-203ENST00000372917 FRMD3A2A2Y4 597 aa12.48□□□□□ -0.41
TRERF1-203ENST00000372917 LRRN4CLQ8ND94 238 aa12.48□□□□□ -0.41
TRERF1-203ENST00000372917 TRIM6Q9C030 488 aaPredicted RBP12.48□□□□□ -0.41
TRERF1-203ENST00000372917 CCDC171Q6TFL3 1326 aa12.48□□□□□ -0.41
TRERF1-203ENST00000372917 MAGI1Q96QZ7 1491 aaPredicted RBP12.48□□□□□ -0.41
TRERF1-203ENST00000372917 HNRNPH1P31943 449 aaKnown RBP12.48□□□□□ -0.41
TRERF1-203ENST00000372917 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
TRERF1-203ENST00000372917 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
TRERF1-203ENST00000372917 PRDM15P57071 1507 aaPredicted RBP12.48□□□□□ -0.41
TRERF1-203ENST00000372917 FBXW10Q5XX13 1052 aa12.48□□□□□ -0.41
TRERF1-203ENST00000372917 CPLX2Q6PUV4 134 aaKnown RBP12.48□□□□□ -0.41
TRERF1-203ENST00000372917 IQUBQ8NA54 791 aa12.48□□□□□ -0.41
TRERF1-203ENST00000372917 A0A087WUV0 522 aaPredicted RBP12.47□□□□□ -0.41
TRERF1-203ENST00000372917 MVPQ14764 893 aaKnown RBP12.47□□□□□ -0.41
TRERF1-203ENST00000372917 GGT6Q6P531 493 aa12.47□□□□□ -0.41
TRERF1-203ENST00000372917 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
TRERF1-203ENST00000372917 AP1G2O75843 785 aa12.47□□□□□ -0.41
TRERF1-203ENST00000372917 RARSP54136 660 aaKnown RBP12.47□□□□□ -0.41
TRERF1-203ENST00000372917 ZKSCAN2Q63HK3 967 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms