RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 FOXD4L3Q6VB84 417 aaPredicted RBP16.51■□□□□ 0.23
RAB40A-202ENST00000372633 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
RAB40A-202ENST00000372633 KDM4AO75164 1064 aa16.51■□□□□ 0.23
RAB40A-202ENST00000372633 RTF1Q92541 710 aaKnown RBP16.51■□□□□ 0.23
RAB40A-202ENST00000372633 CRYBG1Q9Y4K1 1723 aa16.51■□□□□ 0.23
RAB40A-202ENST00000372633 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
RAB40A-202ENST00000372633 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
RAB40A-202ENST00000372633 SGSM2O43147 1006 aa16.5■□□□□ 0.23
RAB40A-202ENST00000372633 HCLS1P14317 486 aaPredicted RBP16.5■□□□□ 0.23
RAB40A-202ENST00000372633 SSH3Q8TE77 659 aa16.5■□□□□ 0.23
RAB40A-202ENST00000372633 ZNF830Q96NB3 372 aaPredicted RBP16.5■□□□□ 0.23
RAB40A-202ENST00000372633 SNX14Q9Y5W7 946 aa16.5■□□□□ 0.23
RAB40A-202ENST00000372633 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
RAB40A-202ENST00000372633 DNTTIP2Q5QJE6 756 aaKnown RBP16.5■□□□□ 0.23
RAB40A-202ENST00000372633 CCDC30Q5VVM6 783 aa16.5■□□□□ 0.23
RAB40A-202ENST00000372633 TTC12Q9H892 705 aaPredicted RBP16.5■□□□□ 0.23
RAB40A-202ENST00000372633 LRRFIP2Q9Y608 721 aaKnown RBP16.5■□□□□ 0.23
RAB40A-202ENST00000372633 USP6P35125 1406 aa16.49■□□□□ 0.23
RAB40A-202ENST00000372633 STX6O43752 255 aa16.49■□□□□ 0.23
RAB40A-202ENST00000372633 SYT1P21579 422 aa16.49■□□□□ 0.23
RAB40A-202ENST00000372633 HTATSF1O43719 755 aaKnown RBP16.49■□□□□ 0.23
RAB40A-202ENST00000372633 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
RAB40A-202ENST00000372633 PI4K2BQ8TCG2 481 aa16.49■□□□□ 0.23
RAB40A-202ENST00000372633 USP44Q9H0E7 712 aa16.49■□□□□ 0.23
RAB40A-202ENST00000372633 LSG1Q9H089 658 aaKnown RBP16.48■□□□□ 0.23
RAB40A-202ENST00000372633 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
RAB40A-202ENST00000372633 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
RAB40A-202ENST00000372633 F13A1P00488 732 aa16.48■□□□□ 0.23
RAB40A-202ENST00000372633 ATP6V1DQ9Y5K8 247 aa16.48■□□□□ 0.23
RAB40A-202ENST00000372633 ACEP12821 1306 aa16.48■□□□□ 0.23
RAB40A-202ENST00000372633 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
RAB40A-202ENST00000372633 AK2P54819 239 aa16.47■□□□□ 0.23
RAB40A-202ENST00000372633 POLA2Q14181 598 aa16.47■□□□□ 0.23
RAB40A-202ENST00000372633 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.47■□□□□ 0.23
RAB40A-202ENST00000372633 UTP14CQ5TAP6 766 aaKnown RBP16.46■□□□□ 0.23
RAB40A-202ENST00000372633 KIAA1524Q8TCG1 905 aa16.46■□□□□ 0.23
RAB40A-202ENST00000372633 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
RAB40A-202ENST00000372633 MPNDQ8N594 471 aa16.45■□□□□ 0.22
RAB40A-202ENST00000372633 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
RAB40A-202ENST00000372633 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
RAB40A-202ENST00000372633 CEP170BQ9Y4F5 1589 aaPredicted RBP16.45■□□□□ 0.22
RAB40A-202ENST00000372633 TPM3P06753 285 aa16.45■□□□□ 0.22
RAB40A-202ENST00000372633 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
RAB40A-202ENST00000372633 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
RAB40A-202ENST00000372633 SBNO1A3KN83 1393 aa16.45■□□□□ 0.22
RAB40A-202ENST00000372633 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
RAB40A-202ENST00000372633 UBTFL1P0CB47 393 aaPredicted RBP16.44■□□□□ 0.22
RAB40A-202ENST00000372633 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
RAB40A-202ENST00000372633 OSCARQ8IYS5 282 aa16.44■□□□□ 0.22
RAB40A-202ENST00000372633 C17orf53Q8N3J3 647 aaPredicted RBP16.44■□□□□ 0.22
RAB40A-202ENST00000372633 FLT4P35916 1363 aa16.44■□□□□ 0.22
RAB40A-202ENST00000372633 AP5Z1O43299 807 aa16.44■□□□□ 0.22
RAB40A-202ENST00000372633 BABAM1Q9NWV8 329 aa16.44■□□□□ 0.22
RAB40A-202ENST00000372633 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
RAB40A-202ENST00000372633 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
RAB40A-202ENST00000372633 USP42Q9H9J4 1324 aaKnown RBP16.43■□□□□ 0.22
RAB40A-202ENST00000372633 RHPN1Q8TCX5 695 aa16.43■□□□□ 0.22
RAB40A-202ENST00000372633 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
RAB40A-202ENST00000372633 ZSCAN20P17040 1043 aaPredicted RBP16.43■□□□□ 0.22
RAB40A-202ENST00000372633 KCNF1Q9H3M0 494 aa16.43■□□□□ 0.22
RAB40A-202ENST00000372633 MTMR6Q9Y217 621 aa16.43■□□□□ 0.22
RAB40A-202ENST00000372633 DMTNQ08495 405 aa16.43■□□□□ 0.22
RAB40A-202ENST00000372633 CNTROBQ8N137 903 aa16.43■□□□□ 0.22
RAB40A-202ENST00000372633 TSC1Q92574 1164 aa16.43■□□□□ 0.22
RAB40A-202ENST00000372633 GIMAP6Q6P9H5 292 aa16.42■□□□□ 0.22
RAB40A-202ENST00000372633 KCNB2Q92953 911 aa16.42■□□□□ 0.22
RAB40A-202ENST00000372633 EYA1Q99502 592 aa16.42■□□□□ 0.22
RAB40A-202ENST00000372633 FIBPO43427 364 aa16.42■□□□□ 0.22
RAB40A-202ENST00000372633 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
RAB40A-202ENST00000372633 KIF1BPQ96EK5 621 aa16.42■□□□□ 0.22
RAB40A-202ENST00000372633 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
RAB40A-202ENST00000372633 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
RAB40A-202ENST00000372633 SURF6O75683 361 aaKnown RBP16.41■□□□□ 0.22
RAB40A-202ENST00000372633 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
RAB40A-202ENST00000372633 ARID3AQ99856 593 aa16.41■□□□□ 0.22
RAB40A-202ENST00000372633 TM6SF1Q9BZW5 370 aa16.41■□□□□ 0.22
RAB40A-202ENST00000372633 LARGE1O95461 756 aa16.41■□□□□ 0.22
RAB40A-202ENST00000372633 MAP4K4O95819 1239 aaPredicted RBP16.41■□□□□ 0.22
RAB40A-202ENST00000372633 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
RAB40A-202ENST00000372633 HDGFP51858 240 aaKnown RBP16.4■□□□□ 0.22
RAB40A-202ENST00000372633 DNM1Q05193 864 aaKnown RBP16.4■□□□□ 0.22
RAB40A-202ENST00000372633 ZSCAN31Q96LW9 406 aaPredicted RBP16.4■□□□□ 0.22
RAB40A-202ENST00000372633 SH2B1Q9NRF2 756 aaPredicted RBP16.4■□□□□ 0.22
RAB40A-202ENST00000372633 DIAPH3Q9NSV4 1193 aa16.4■□□□□ 0.22
RAB40A-202ENST00000372633 GNAT3A8MTJ3 354 aa16.4■□□□□ 0.22
RAB40A-202ENST00000372633 PYCARDQ9ULZ3 195 aa16.4■□□□□ 0.22
RAB40A-202ENST00000372633 PTPRUQ92729 1446 aa16.39■□□□□ 0.22
RAB40A-202ENST00000372633 GJB2P29033 226 aa16.39■□□□□ 0.21
RAB40A-202ENST00000372633 ZBTB7CA1YPR0 619 aa16.39■□□□□ 0.21
RAB40A-202ENST00000372633 CTIFO43310 598 aaKnown RBP16.39■□□□□ 0.21
RAB40A-202ENST00000372633 CASTP20810 708 aaKnown RBP16.39■□□□□ 0.21
RAB40A-202ENST00000372633 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
RAB40A-202ENST00000372633 TTC41PQ6P2S7 1318 aa16.39■□□□□ 0.21
RAB40A-202ENST00000372633 CCDC192P0DO97 292 aa16.39■□□□□ 0.21
RAB40A-202ENST00000372633 ANKRD7Q92527 254 aa16.39■□□□□ 0.21
RAB40A-202ENST00000372633 LARP6Q9BRS8 491 aaKnown RBP16.39■□□□□ 0.21
RAB40A-202ENST00000372633 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
RAB40A-202ENST00000372633 NECTIN2Q92692 538 aa16.38■□□□□ 0.21
RAB40A-202ENST00000372633 GOLGA6L6A8MZA4 724 aa16.38■□□□□ 0.21
RAB40A-202ENST00000372633 ST3GAL1Q11201 340 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms