RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 PLPPR3Q6T4P5 718 aa14.36□□□□□ -0.11
SNX21-205ENST00000372547 FERMT3Q86UX7 667 aa14.36□□□□□ -0.11
SNX21-205ENST00000372547 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
SNX21-205ENST00000372547 KIAA1524Q8TCG1 905 aa14.36□□□□□ -0.11
SNX21-205ENST00000372547 SPTLC3Q9NUV7 552 aa14.36□□□□□ -0.11
SNX21-205ENST00000372547 LARGE1O95461 756 aa14.35□□□□□ -0.11
SNX21-205ENST00000372547 CASTP20810 708 aaKnown RBP14.35□□□□□ -0.11
SNX21-205ENST00000372547 C16orf45Q96MC5 204 aaPredicted RBP14.35□□□□□ -0.11
SNX21-205ENST00000372547 SNX14Q9Y5W7 946 aa14.35□□□□□ -0.11
SNX21-205ENST00000372547 PIK3C2BO00750 1634 aa14.35□□□□□ -0.11
SNX21-205ENST00000372547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.35□□□□□ -0.11
SNX21-205ENST00000372547 HSPA4P34932 840 aa14.35□□□□□ -0.11
SNX21-205ENST00000372547 RUFY3Q7L099 469 aa14.35□□□□□ -0.11
SNX21-205ENST00000372547 NUDT16Q96DE0 195 aaKnown RBP14.35□□□□□ -0.11
SNX21-205ENST00000372547 TSPOAP1O95153 1857 aa14.35□□□□□ -0.11
SNX21-205ENST00000372547 MYO5BQ9ULV0 1848 aa14.35□□□□□ -0.11
SNX21-205ENST00000372547 SURF6O75683 361 aaKnown RBP14.34□□□□□ -0.11
SNX21-205ENST00000372547 GJB2P29033 226 aa14.34□□□□□ -0.11
SNX21-205ENST00000372547 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
SNX21-205ENST00000372547 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.34□□□□□ -0.11
SNX21-205ENST00000372547 SALL3Q9BXA9 1300 aa14.34□□□□□ -0.11
SNX21-205ENST00000372547 LUZP1Q86V48 1076 aa14.34□□□□□ -0.11
SNX21-205ENST00000372547 CKAP2LQ8IYA6 745 aa14.34□□□□□ -0.11
SNX21-205ENST00000372547 LIMCH1Q9UPQ0 1083 aa14.34□□□□□ -0.11
SNX21-205ENST00000372547 GOLGA6L6A8MZA4 724 aa14.34□□□□□ -0.11
SNX21-205ENST00000372547 LRMPQ12912 555 aa14.34□□□□□ -0.11
SNX21-205ENST00000372547 CPSF1Q10570 1443 aaKnown RBP14.33□□□□□ -0.11
SNX21-205ENST00000372547 CDK12Q9NYV4 1490 aaPredicted RBP14.33□□□□□ -0.11
SNX21-205ENST00000372547 WASLO00401 505 aaPredicted RBP14.33□□□□□ -0.12
SNX21-205ENST00000372547 GNAI3P08754 354 aa14.33□□□□□ -0.12
SNX21-205ENST00000372547 ATP8B2P98198 1209 aa14.33□□□□□ -0.12
SNX21-205ENST00000372547 FLIIQ13045 1269 aa14.33□□□□□ -0.12
SNX21-205ENST00000372547 NECAB1Q8N987 351 aa14.33□□□□□ -0.12
SNX21-205ENST00000372547 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
SNX21-205ENST00000372547 ATP6V1DQ9Y5K8 247 aa14.33□□□□□ -0.12
SNX21-205ENST00000372547 NAA30Q147X3 362 aaPredicted RBP14.33□□□□□ -0.12
SNX21-205ENST00000372547 ZNF771Q7L3S4 317 aaPredicted RBP14.33□□□□□ -0.12
SNX21-205ENST00000372547 CCDC192P0DO97 292 aa14.32□□□□□ -0.12
SNX21-205ENST00000372547 CCDC186Q7Z3E2 898 aa14.32□□□□□ -0.12
SNX21-205ENST00000372547 TMEM87AQ8NBN3 555 aa14.32□□□□□ -0.12
SNX21-205ENST00000372547 GTPBP4Q9BZE4 634 aaKnown RBP14.32□□□□□ -0.12
SNX21-205ENST00000372547 NRBP1Q9UHY1 535 aa14.32□□□□□ -0.12
SNX21-205ENST00000372547 EDC4Q6P2E9 1401 aaKnown RBP14.31□□□□□ -0.12
SNX21-205ENST00000372547 UBTFL1P0CB47 393 aaPredicted RBP14.31□□□□□ -0.12
SNX21-205ENST00000372547 JAKMIP1Q96N16 626 aaKnown RBP14.31□□□□□ -0.12
SNX21-205ENST00000372547 KIAA0232Q92628 1395 aa14.31□□□□□ -0.12
SNX21-205ENST00000372547 RICTORQ6R327 1708 aa14.31□□□□□ -0.12
SNX21-205ENST00000372547 MTHFSDQ2M296 383 aaKnown RBP14.31□□□□□ -0.12
SNX21-205ENST00000372547 FUCA2Q9BTY2 467 aa14.3□□□□□ -0.12
SNX21-205ENST00000372547 TRIM5Q9C035 493 aa14.3□□□□□ -0.12
SNX21-205ENST00000372547 GOLGA6L4A6NEF3 574 aa14.3□□□□□ -0.12
SNX21-205ENST00000372547 SGSM2O43147 1006 aa14.3□□□□□ -0.12
SNX21-205ENST00000372547 OS9Q13438 667 aaPredicted RBP14.3□□□□□ -0.12
SNX21-205ENST00000372547 PRPF40BQ6NWY9 871 aaKnown RBP14.3□□□□□ -0.12
SNX21-205ENST00000372547 ATP7BP35670 1465 aa14.3□□□□□ -0.12
SNX21-205ENST00000372547 CPS1P31327 1500 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 ADCK5Q3MIX3 580 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 RAD50Q92878 1312 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
SNX21-205ENST00000372547 MTMR6Q9Y217 621 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 CCDC61Q9Y6R9 512 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 ALKQ9UM73 1620 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 LIG1P18858 919 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 KCNJ4P48050 445 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 PPP1R42Q7Z4L9 355 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 TTC14Q96N46 770 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 PDRG1Q9NUG6 133 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 STAP2Q9UGK3 403 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 SSH2Q76I76 1423 aa14.29□□□□□ -0.12
SNX21-205ENST00000372547 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
SNX21-205ENST00000372547 NUP62CLQ9H1M0 184 aa14.28□□□□□ -0.12
SNX21-205ENST00000372547 CLTCQ00610 1675 aaKnown RBP14.28□□□□□ -0.12
SNX21-205ENST00000372547 AATKQ6ZMQ8 1374 aa14.28□□□□□ -0.12
SNX21-205ENST00000372547 SRGAP3O43295 1099 aa14.28□□□□□ -0.12
SNX21-205ENST00000372547 TNNT1P13805 278 aa14.28□□□□□ -0.12
SNX21-205ENST00000372547 MAP3K11Q16584 847 aa14.28□□□□□ -0.12
SNX21-205ENST00000372547 CNTROBQ8N137 903 aa14.28□□□□□ -0.12
SNX21-205ENST00000372547 LSG1Q9H089 658 aaKnown RBP14.28□□□□□ -0.12
SNX21-205ENST00000372547 TYRO3Q06418 890 aa14.28□□□□□ -0.12
SNX21-205ENST00000372547 NCBP1Q09161 790 aaKnown RBP14.28□□□□□ -0.12
SNX21-205ENST00000372547 ANO6Q4KMQ2 910 aa14.28□□□□□ -0.12
SNX21-205ENST00000372547 LARP1BQ659C4 914 aaKnown RBP14.28□□□□□ -0.12
SNX21-205ENST00000372547 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNX21-205ENST00000372547 V9GYY5 206 aaPredicted RBP14.28□□□□□ -0.12
SNX21-205ENST00000372547 TPM3P06753 285 aa14.27□□□□□ -0.12
SNX21-205ENST00000372547 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.12
SNX21-205ENST00000372547 FAM200AQ8TCP9 573 aa14.27□□□□□ -0.12
SNX21-205ENST00000372547 RHPN1Q8TCX5 695 aa14.27□□□□□ -0.12
SNX21-205ENST00000372547 ANKRD7Q92527 254 aa14.27□□□□□ -0.12
SNX21-205ENST00000372547 USP44Q9H0E7 712 aa14.27□□□□□ -0.12
SNX21-205ENST00000372547 TNMDQ9H2S6 317 aa14.27□□□□□ -0.12
SNX21-205ENST00000372547 KIF20AO95235 890 aa14.27□□□□□ -0.13
SNX21-205ENST00000372547 PTH1RQ03431 593 aa14.27□□□□□ -0.13
SNX21-205ENST00000372547 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.13
SNX21-205ENST00000372547 TTC6Q86TZ1 520 aa14.27□□□□□ -0.13
SNX21-205ENST00000372547 HYPKQ9NX55 129 aa14.27□□□□□ -0.13
SNX21-205ENST00000372547 DACT1Q9NYF0 836 aa14.27□□□□□ -0.13
SNX21-205ENST00000372547 CGNQ9P2M7 1197 aaKnown RBP14.27□□□□□ -0.13
SNX21-205ENST00000372547 MAP3K19Q56UN5 1328 aa14.26□□□□□ -0.13
SNX21-205ENST00000372547 EIF2S2P20042 333 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms