RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 USP16Q9Y5T5 823 aa23.09■■□□□ 1.29
CCDC17-201ENST00000372044 AAMPQ13685 434 aa23.08■■□□□ 1.29
CCDC17-201ENST00000372044 MARCH10Q8NA82 808 aaPredicted RBP23.08■■□□□ 1.29
CCDC17-201ENST00000372044 PDIA6Q15084 440 aa23.07■■□□□ 1.28
CCDC17-201ENST00000372044 SLC4A10Q6U841 1118 aa23.07■■□□□ 1.28
CCDC17-201ENST00000372044 FBXO41Q8TF61 875 aa23.07■■□□□ 1.28
CCDC17-201ENST00000372044 DBF4Q9UBU7 674 aaPredicted RBP23.07■■□□□ 1.28
CCDC17-201ENST00000372044 AFF2P51816 1311 aa23.07■■□□□ 1.28
CCDC17-201ENST00000372044 BCL9O00512 1426 aa23.06■■□□□ 1.28
CCDC17-201ENST00000372044 SNRPA1P09661 255 aaKnown RBP23.06■■□□□ 1.28
CCDC17-201ENST00000372044 C1orf115Q9H7X2 142 aa23.06■■□□□ 1.28
CCDC17-201ENST00000372044 ASAP1Q9ULH1 1129 aa23.06■■□□□ 1.28
CCDC17-201ENST00000372044 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
CCDC17-201ENST00000372044 CENPQQ7L2Z9 268 aaPredicted RBP23.05■■□□□ 1.28
CCDC17-201ENST00000372044 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
CCDC17-201ENST00000372044 ADCY9O60503 1353 aa23.03■■□□□ 1.28
CCDC17-201ENST00000372044 ATG3Q9NT62 314 aa23.02■■□□□ 1.28
CCDC17-201ENST00000372044 PXDNLA1KZ92 1463 aa23.02■■□□□ 1.28
CCDC17-201ENST00000372044 PRIM1P49642 420 aaKnown RBP23.02■■□□□ 1.28
CCDC17-201ENST00000372044 SYTL4Q96C24 671 aaPredicted RBP23.02■■□□□ 1.28
CCDC17-201ENST00000372044 DDX21Q9NR30 783 aaKnown RBP eCLIP23.02■■□□□ 1.28
CCDC17-201ENST00000372044 ARFGEF2Q9Y6D5 1785 aa23.02■■□□□ 1.28
CCDC17-201ENST00000372044 MEIS3Q99687 375 aa23.01■■□□□ 1.27
CCDC17-201ENST00000372044 CHMP4AQ9BY43 222 aa23.01■■□□□ 1.27
CCDC17-201ENST00000372044 TJP1Q07157 1748 aa23.01■■□□□ 1.27
CCDC17-201ENST00000372044 MYL6BP14649 208 aa23■■□□□ 1.27
CCDC17-201ENST00000372044 LRP10Q7Z4F1 713 aa23■■□□□ 1.27
CCDC17-201ENST00000372044 PELP1Q8IZL8 1130 aaKnown RBP23■■□□□ 1.27
CCDC17-201ENST00000372044 ACSBG1Q96GR2 724 aa23■■□□□ 1.27
CCDC17-201ENST00000372044 ATRNO75882 1429 aa23■■□□□ 1.27
CCDC17-201ENST00000372044 PI4KAP2A4QPH2 592 aa23■■□□□ 1.27
CCDC17-201ENST00000372044 PI4KAP1Q8N8J0 262 aa23■■□□□ 1.27
CCDC17-201ENST00000372044 AFDNP55196 1824 aaKnown RBP22.99■■□□□ 1.27
CCDC17-201ENST00000372044 SBF2Q86WG5 1849 aa22.99■■□□□ 1.27
CCDC17-201ENST00000372044 CCT4P50991 539 aaKnown RBP22.98■■□□□ 1.27
CCDC17-201ENST00000372044 HYPKQ9NX55 129 aa22.98■■□□□ 1.27
CCDC17-201ENST00000372044 GJD4Q96KN9 370 aaPredicted RBP22.98■■□□□ 1.27
CCDC17-201ENST00000372044 BRWD3Q6RI45 1802 aa22.97■■□□□ 1.27
CCDC17-201ENST00000372044 NUP188Q5SRE5 1749 aa22.97■■□□□ 1.27
CCDC17-201ENST00000372044 A0A0G2JS52 829 aa22.97■■□□□ 1.27
CCDC17-201ENST00000372044 MYT1Q01538 1121 aa22.97■■□□□ 1.27
CCDC17-201ENST00000372044 AIMP1Q12904 312 aaKnown RBP22.97■■□□□ 1.27
CCDC17-201ENST00000372044 SLC4A9Q96Q91 983 aa22.96■■□□□ 1.27
CCDC17-201ENST00000372044 ATP10DQ9P241 1426 aa22.96■■□□□ 1.27
CCDC17-201ENST00000372044 NBPF26B4DH59 902 aa22.96■■□□□ 1.27
CCDC17-201ENST00000372044 NBPF14Q5TI25 921 aa22.96■■□□□ 1.27
CCDC17-201ENST00000372044 NBPF10Q6P3W6 841 aaKnown RBP22.96■■□□□ 1.27
CCDC17-201ENST00000372044 SIRT2Q8IXJ6 389 aa22.96■■□□□ 1.27
CCDC17-201ENST00000372044 NBPF15Q8N660 670 aa22.96■■□□□ 1.27
CCDC17-201ENST00000372044 DNAAF4Q8WXU2 420 aa22.96■■□□□ 1.27
CCDC17-201ENST00000372044 HDAC1Q13547 482 aaPredicted RBP22.95■■□□□ 1.26
CCDC17-201ENST00000372044 RWDD1Q9H446 243 aaPredicted RBP22.95■■□□□ 1.26
CCDC17-201ENST00000372044 KCNQ2O43526 872 aa22.94■■□□□ 1.26
CCDC17-201ENST00000372044 A1BGP04217 495 aa22.94■■□□□ 1.26
CCDC17-201ENST00000372044 XAGE3Q8WTP9 111 aa22.94■■□□□ 1.26
CCDC17-201ENST00000372044 RBM42Q9BTD8 480 aaKnown RBP22.94■■□□□ 1.26
CCDC17-201ENST00000372044 CHMP4BQ9H444 224 aaKnown RBP22.94■■□□□ 1.26
CCDC17-201ENST00000372044 MAP3K2Q9Y2U5 619 aa22.94■■□□□ 1.26
CCDC17-201ENST00000372044 BTAF1O14981 1849 aa22.94■■□□□ 1.26
CCDC17-201ENST00000372044 BEND3Q5T5X7 828 aa22.93■■□□□ 1.26
CCDC17-201ENST00000372044 KSR2Q6VAB6 950 aa22.93■■□□□ 1.26
CCDC17-201ENST00000372044 COPS6Q7L5N1 327 aa22.93■■□□□ 1.26
CCDC17-201ENST00000372044 DNAJC10Q8IXB1 793 aa22.93■■□□□ 1.26
CCDC17-201ENST00000372044 FAM182BQ5T319 152 aa22.92■■□□□ 1.26
CCDC17-201ENST00000372044 TRPC5Q9UL62 973 aaPredicted RBP22.92■■□□□ 1.26
CCDC17-201ENST00000372044 MYH14Q7Z406 1995 aaKnown RBP22.92■■□□□ 1.26
CCDC17-201ENST00000372044 NHSQ6T4R5 1651 aa22.91■■□□□ 1.26
CCDC17-201ENST00000372044 USP44Q9H0E7 712 aa22.91■■□□□ 1.26
CCDC17-201ENST00000372044 EP400Q96L91 3159 aa22.9■■□□□ 1.26
CCDC17-201ENST00000372044 SRCIN1Q9C0H9 1055 aa22.9■■□□□ 1.26
CCDC17-201ENST00000372044 PTF1AQ7RTS3 328 aa22.9■■□□□ 1.26
CCDC17-201ENST00000372044 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
CCDC17-201ENST00000372044 QTRT2Q9H974 415 aaKnown RBP22.9■■□□□ 1.26
CCDC17-201ENST00000372044 COL5A3P25940 1745 aaPredicted RBP22.88■■□□□ 1.25
CCDC17-201ENST00000372044 CICQ96RK0 1608 aaPredicted RBP22.88■■□□□ 1.25
CCDC17-201ENST00000372044 ERBB4Q15303 1308 aa22.88■■□□□ 1.25
CCDC17-201ENST00000372044 CEP85Q6P2H3 762 aa22.88■■□□□ 1.25
CCDC17-201ENST00000372044 CWF19L2Q2TBE0 894 aaKnown RBP22.88■■□□□ 1.25
CCDC17-201ENST00000372044 PDZRN3Q9UPQ7 1066 aa22.88■■□□□ 1.25
CCDC17-201ENST00000372044 ONECUT3O60422 494 aaPredicted RBP22.87■■□□□ 1.25
CCDC17-201ENST00000372044 DDX58O95786 925 aaKnown RBP22.87■■□□□ 1.25
CCDC17-201ENST00000372044 ILDR1Q86SU0 546 aaPredicted RBP22.87■■□□□ 1.25
CCDC17-201ENST00000372044 SMC5Q8IY18 1101 aa22.87■■□□□ 1.25
CCDC17-201ENST00000372044 TSHZ2Q9NRE2 1034 aa22.87■■□□□ 1.25
CCDC17-201ENST00000372044 TTLL7Q6ZT98 887 aa22.86■■□□□ 1.25
CCDC17-201ENST00000372044 RIC3Q7Z5B4 369 aa22.86■■□□□ 1.25
CCDC17-201ENST00000372044 ANKRD44Q8N8A2 993 aa22.86■■□□□ 1.25
CCDC17-201ENST00000372044 NBPF7P0C2Y1 421 aaPredicted RBP22.85■■□□□ 1.25
CCDC17-201ENST00000372044 RGS3P49796 1198 aa22.85■■□□□ 1.25
CCDC17-201ENST00000372044 ANKRD13DQ6ZTN6 518 aa22.85■■□□□ 1.25
CCDC17-201ENST00000372044 IGKV5-2P06315 115 aa22.85■■□□□ 1.25
CCDC17-201ENST00000372044 SEPT12Q8IYM1 358 aa22.85■■□□□ 1.25
CCDC17-201ENST00000372044 RREB1Q92766 1687 aa22.84■■□□□ 1.25
CCDC17-201ENST00000372044 GNAI3P08754 354 aa22.84■■□□□ 1.25
CCDC17-201ENST00000372044 CYP19A1P11511 503 aaPredicted RBP22.84■■□□□ 1.25
CCDC17-201ENST00000372044 LRRFIP2Q9Y608 721 aaKnown RBP22.84■■□□□ 1.25
CCDC17-201ENST00000372044 ZNF831Q5JPB2 1677 aa22.84■■□□□ 1.25
CCDC17-201ENST00000372044 NUP98P52948 1817 aa22.84■■□□□ 1.25
CCDC17-201ENST00000372044 GNAI2P04899 355 aa22.83■■□□□ 1.25
CCDC17-201ENST00000372044 TEX13AQ9BXU3 409 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms