RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SLKQ9H2G2 1235 aaPredicted RBP14.3□□□□□ -0.12
TSPAN1-201ENST00000372003 ATG3Q9NT62 314 aa14.3□□□□□ -0.12
TSPAN1-201ENST00000372003 BAG6P46379 1132 aa14.29□□□□□ -0.12
TSPAN1-201ENST00000372003 HDAC1Q13547 482 aaPredicted RBP14.29□□□□□ -0.12
TSPAN1-201ENST00000372003 TAF7Q15545 349 aaPredicted RBP14.29□□□□□ -0.12
TSPAN1-201ENST00000372003 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
TSPAN1-201ENST00000372003 PTMSP20962 102 aa14.28□□□□□ -0.12
TSPAN1-201ENST00000372003 EZH2Q15910 746 aaKnown RBP14.28□□□□□ -0.12
TSPAN1-201ENST00000372003 DOT1LQ8TEK3 1739 aa14.28□□□□□ -0.12
TSPAN1-201ENST00000372003 EIF5BO60841 1220 aaKnown RBP14.27□□□□□ -0.12
TSPAN1-201ENST00000372003 PTCD1O75127 700 aaKnown RBP14.27□□□□□ -0.12
TSPAN1-201ENST00000372003 CLCN1P35523 988 aa14.27□□□□□ -0.12
TSPAN1-201ENST00000372003 MRE11P49959 708 aa14.27□□□□□ -0.12
TSPAN1-201ENST00000372003 KCNQ4P56696 695 aa14.27□□□□□ -0.12
TSPAN1-201ENST00000372003 ZKSCAN2Q63HK3 967 aa14.27□□□□□ -0.12
TSPAN1-201ENST00000372003 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.12
TSPAN1-201ENST00000372003 TOGARAM1Q9Y4F4 1720 aa14.27□□□□□ -0.13
TSPAN1-201ENST00000372003 SOCS7O14512 581 aa14.26□□□□□ -0.13
TSPAN1-201ENST00000372003 PLSCR1O15162 318 aa14.26□□□□□ -0.13
TSPAN1-201ENST00000372003 KCNQ3O43525 872 aa14.26□□□□□ -0.13
TSPAN1-201ENST00000372003 TTC5Q8N0Z6 440 aa14.26□□□□□ -0.13
TSPAN1-201ENST00000372003 SMARCC1Q92922 1105 aaPredicted RBP14.26□□□□□ -0.13
TSPAN1-201ENST00000372003 PALLDQ8WX93 1383 aa14.26□□□□□ -0.13
TSPAN1-201ENST00000372003 CAMKK2Q96RR4 588 aa14.26□□□□□ -0.13
TSPAN1-201ENST00000372003 C22orf23Q9BZE7 217 aa14.26□□□□□ -0.13
TSPAN1-201ENST00000372003 RRAGDQ9NQL2 400 aaPredicted RBP14.26□□□□□ -0.13
TSPAN1-201ENST00000372003 KAT6BQ8WYB5 2073 aa14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 NHSQ6T4R5 1651 aa14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 RLBP1P12271 317 aa14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 XRCC6P12956 609 aaKnown RBP eCLIP14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 TXNRD1Q16881 649 aa14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 ZNF790Q6PG37 636 aa14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 PROM2Q8N271 834 aa14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 SNX21Q969T3 373 aa14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 TSPYL4Q9UJ04 414 aa14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
TSPAN1-201ENST00000372003 CALD1Q05682 793 aaKnown RBP14.24□□□□□ -0.13
TSPAN1-201ENST00000372003 DZIP1LQ8IYY4 767 aaKnown RBP14.24□□□□□ -0.13
TSPAN1-201ENST00000372003 CCNL1Q9UK58 526 aaPredicted RBP14.24□□□□□ -0.13
TSPAN1-201ENST00000372003 LOC102724428A0A0B4J2F2 783 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 ATP6V1AP38606 617 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 SIK1P57059 783 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 DDX19BQ9UMR2 479 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 IL16Q14005 1332 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 SBF2Q86WG5 1849 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 MRC1P22897 1456 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 SCN11AQ9UI33 1791 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 TRAK2O60296 914 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 SMC5Q8IY18 1101 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 ZNF496Q96IT1 587 aaPredicted RBP14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 CFAP44Q96MT7 982 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 LRRC4BQ9NT99 713 aa14.23□□□□□ -0.13
TSPAN1-201ENST00000372003 ADAMTS7Q9UKP4 1686 aa14.22□□□□□ -0.13
TSPAN1-201ENST00000372003 CHL1O00533 1208 aa14.22□□□□□ -0.13
TSPAN1-201ENST00000372003 RBM25P49756 843 aaKnown RBP14.22□□□□□ -0.13
TSPAN1-201ENST00000372003 HSCBQ8IWL3 235 aa14.22□□□□□ -0.13
TSPAN1-201ENST00000372003 SLC4A9Q96Q91 983 aa14.22□□□□□ -0.13
TSPAN1-201ENST00000372003 DLG5Q8TDM6 1919 aa14.21□□□□□ -0.13
TSPAN1-201ENST00000372003 DDIT3P35638 169 aa14.21□□□□□ -0.13
TSPAN1-201ENST00000372003 GNAI1P63096 354 aa14.21□□□□□ -0.13
TSPAN1-201ENST00000372003 SKOR2Q2VWA4 1001 aaPredicted RBP14.21□□□□□ -0.13
TSPAN1-201ENST00000372003 FMNL2Q96PY5 1086 aa14.21□□□□□ -0.13
TSPAN1-201ENST00000372003 MBIPQ9NS73 344 aa14.21□□□□□ -0.13
TSPAN1-201ENST00000372003 IFT57Q9NWB7 429 aa14.21□□□□□ -0.13
TSPAN1-201ENST00000372003 BTAF1O14981 1849 aa14.21□□□□□ -0.13
TSPAN1-201ENST00000372003 ITGB4P16144 1822 aa14.2□□□□□ -0.14
TSPAN1-201ENST00000372003 KIF16BQ96L93 1317 aa14.2□□□□□ -0.14
TSPAN1-201ENST00000372003 GLIPR1L2Q4G1C9 344 aa14.2□□□□□ -0.14
TSPAN1-201ENST00000372003 SLC27A3Q5K4L6 730 aa14.2□□□□□ -0.14
TSPAN1-201ENST00000372003 FTSJ3Q8IY81 847 aaKnown RBP14.2□□□□□ -0.14
TSPAN1-201ENST00000372003 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
TSPAN1-201ENST00000372003 TNS1Q9HBL0 1735 aaKnown RBP14.2□□□□□ -0.14
TSPAN1-201ENST00000372003 ZNF853P0CG23 659 aa14.19□□□□□ -0.14
TSPAN1-201ENST00000372003 EIF4A1P60842 406 aaKnown RBP14.19□□□□□ -0.14
TSPAN1-201ENST00000372003 ITPK1Q13572 414 aa14.19□□□□□ -0.14
TSPAN1-201ENST00000372003 BABAM1Q9NWV8 329 aa14.19□□□□□ -0.14
TSPAN1-201ENST00000372003 PRAMEF22A3QJZ6 481 aa14.19□□□□□ -0.14
TSPAN1-201ENST00000372003 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
TSPAN1-201ENST00000372003 KRT24Q2M2I5 525 aa14.18□□□□□ -0.14
TSPAN1-201ENST00000372003 CHMP4BQ9H444 224 aaKnown RBP14.18□□□□□ -0.14
TSPAN1-201ENST00000372003 HEG1Q9ULI3 1381 aa14.17□□□□□ -0.14
TSPAN1-201ENST00000372003 ELL2O00472 640 aaPredicted RBP14.17□□□□□ -0.14
TSPAN1-201ENST00000372003 LINC00116Q8NCU8 138 aa14.17□□□□□ -0.14
TSPAN1-201ENST00000372003 ZNF428Q96B54 188 aa14.17□□□□□ -0.14
TSPAN1-201ENST00000372003 GBP4Q96PP9 640 aa14.17□□□□□ -0.14
TSPAN1-201ENST00000372003 GRPEL1Q9HAV7 217 aa14.17□□□□□ -0.14
TSPAN1-201ENST00000372003 IPO8O15397 1037 aaKnown RBP14.16□□□□□ -0.14
TSPAN1-201ENST00000372003 SNRPA1P09661 255 aaKnown RBP14.16□□□□□ -0.14
TSPAN1-201ENST00000372003 ATF7IPQ6VMQ6 1270 aa14.16□□□□□ -0.14
TSPAN1-201ENST00000372003 VSIG10Q8N0Z9 540 aa14.16□□□□□ -0.14
TSPAN1-201ENST00000372003 USP16Q9Y5T5 823 aa14.16□□□□□ -0.14
TSPAN1-201ENST00000372003 KCPQ6ZWJ8 1503 aa14.16□□□□□ -0.14
TSPAN1-201ENST00000372003 GIGYF1O75420 1035 aaPredicted RBP14.15□□□□□ -0.14
TSPAN1-201ENST00000372003 MFAP1P55081 439 aaKnown RBP14.15□□□□□ -0.14
TSPAN1-201ENST00000372003 BRPF1P55201 1214 aaPredicted RBP14.15□□□□□ -0.14
TSPAN1-201ENST00000372003 TNNQ9UQP3 1299 aa14.15□□□□□ -0.14
TSPAN1-201ENST00000372003 RRP9O43818 475 aaKnown RBP14.15□□□□□ -0.14
TSPAN1-201ENST00000372003 EIF2S2P20042 333 aaKnown RBP14.15□□□□□ -0.14
TSPAN1-201ENST00000372003 ALDH1L2Q3SY69 923 aa14.15□□□□□ -0.14
TSPAN1-201ENST00000372003 NBPF14Q5TI25 921 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms