RNA–Protein interactions for RNA: ENST00000371520.5

ECHDC2-202, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 1,606 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-202ENST00000371520 N4BP2Q86UW6 1770 aaPredicted RBP25.42■■□□□ 1.66
ECHDC2-202ENST00000371520 G2E3Q7L622 706 aa25.42■■□□□ 1.66
ECHDC2-202ENST00000371520 SEPT12Q8IYM1 358 aa25.42■■□□□ 1.66
ECHDC2-202ENST00000371520 CHPF2Q9P2E5 772 aa25.42■■□□□ 1.66
ECHDC2-202ENST00000371520 DBF4Q9UBU7 674 aaPredicted RBP25.41■■□□□ 1.66
ECHDC2-202ENST00000371520 MVPQ14764 893 aaKnown RBP25.41■■□□□ 1.66
ECHDC2-202ENST00000371520 ACSBG1Q96GR2 724 aa25.41■■□□□ 1.66
ECHDC2-202ENST00000371520 FLIIQ13045 1269 aa25.4■■□□□ 1.66
ECHDC2-202ENST00000371520 PTCD1O75127 700 aaKnown RBP25.39■■□□□ 1.66
ECHDC2-202ENST00000371520 CICQ96RK0 1608 aaPredicted RBP25.39■■□□□ 1.65
ECHDC2-202ENST00000371520 TJP1Q07157 1748 aa25.38■■□□□ 1.65
ECHDC2-202ENST00000371520 TMEM57Q8N5G2 664 aa25.38■■□□□ 1.65
ECHDC2-202ENST00000371520 USP16Q9Y5T5 823 aa25.38■■□□□ 1.65
ECHDC2-202ENST00000371520 RBM6P78332 1123 aaKnown RBP25.37■■□□□ 1.65
ECHDC2-202ENST00000371520 VSIG10Q8N0Z9 540 aa25.37■■□□□ 1.65
ECHDC2-202ENST00000371520 BTAF1O14981 1849 aa25.37■■□□□ 1.65
ECHDC2-202ENST00000371520 DDX21Q9NR30 783 aaKnown RBP eCLIP25.37■■□□□ 1.65
ECHDC2-202ENST00000371520 PDIA6Q15084 440 aa25.35■■□□□ 1.65
ECHDC2-202ENST00000371520 PHAXQ9H814 394 aaKnown RBP25.35■■□□□ 1.65
ECHDC2-202ENST00000371520 ZNF831Q5JPB2 1677 aa25.35■■□□□ 1.65
ECHDC2-202ENST00000371520 ERBB4Q15303 1308 aa25.35■■□□□ 1.65
ECHDC2-202ENST00000371520 PXDNLA1KZ92 1463 aa25.35■■□□□ 1.65
ECHDC2-202ENST00000371520 KCNQ2O43526 872 aa25.34■■□□□ 1.65
ECHDC2-202ENST00000371520 ANXA1P04083 346 aa25.34■■□□□ 1.65
ECHDC2-202ENST00000371520 FKBP5Q13451 457 aaPredicted RBP25.34■■□□□ 1.65
ECHDC2-202ENST00000371520 PROSER3Q2NL68 480 aa25.34■■□□□ 1.65
ECHDC2-202ENST00000371520 ITPRIPQ8IWB1 547 aa25.34■■□□□ 1.65
ECHDC2-202ENST00000371520 HYPKQ9NX55 129 aa25.34■■□□□ 1.65
ECHDC2-202ENST00000371520 DDX19BQ9UMR2 479 aa25.34■■□□□ 1.65
ECHDC2-202ENST00000371520 AAMPQ13685 434 aa25.34■■□□□ 1.65
ECHDC2-202ENST00000371520 FAM182BQ5T319 152 aa25.31■■□□□ 1.64
ECHDC2-202ENST00000371520 INTS3Q68E01 1043 aaKnown RBP25.31■■□□□ 1.64
ECHDC2-202ENST00000371520 B4GALNT3Q6L9W6 998 aa25.31■■□□□ 1.64
ECHDC2-202ENST00000371520 RBM42Q9BTD8 480 aaKnown RBP25.31■■□□□ 1.64
ECHDC2-202ENST00000371520 TEX13AQ9BXU3 409 aaPredicted RBP25.31■■□□□ 1.64
ECHDC2-202ENST00000371520 LRP10Q7Z4F1 713 aa25.3■■□□□ 1.64
ECHDC2-202ENST00000371520 CCDC136Q96JN2 1154 aa25.3■■□□□ 1.64
ECHDC2-202ENST00000371520 SLC4A9Q96Q91 983 aa25.3■■□□□ 1.64
ECHDC2-202ENST00000371520 PALLDQ8WX93 1383 aa25.3■■□□□ 1.64
ECHDC2-202ENST00000371520 F6X3S4 739 aa25.29■■□□□ 1.64
ECHDC2-202ENST00000371520 DNAJC10Q8IXB1 793 aa25.29■■□□□ 1.64
ECHDC2-202ENST00000371520 SMARCC1Q92922 1105 aaPredicted RBP25.29■■□□□ 1.64
ECHDC2-202ENST00000371520 RGS17Q9UGC6 210 aaPredicted RBP25.29■■□□□ 1.64
ECHDC2-202ENST00000371520 KRT27Q7Z3Y8 459 aa25.28■■□□□ 1.64
ECHDC2-202ENST00000371520 COL5A3P25940 1745 aaPredicted RBP25.28■■□□□ 1.64
ECHDC2-202ENST00000371520 ADCY9O60503 1353 aa25.27■■□□□ 1.64
ECHDC2-202ENST00000371520 LY75O60449 1722 aa25.27■■□□□ 1.64
ECHDC2-202ENST00000371520 MYL6BP14649 208 aa25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 RXRBP28702 533 aa25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 RREB1Q92766 1687 aa25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 ARFGEF2Q9Y6D5 1785 aa25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 NBPF26B4DH59 902 aa25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 STARD3NLO95772 234 aa25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 CCT4P50991 539 aaKnown RBP25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 NBPF14Q5TI25 921 aa25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 NBPF10Q6P3W6 841 aaKnown RBP25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 NBPF15Q8N660 670 aa25.26■■□□□ 1.63
ECHDC2-202ENST00000371520 PTF1AQ7RTS3 328 aa25.25■■□□□ 1.63
ECHDC2-202ENST00000371520 CHMP4BQ9H444 224 aaKnown RBP25.25■■□□□ 1.63
ECHDC2-202ENST00000371520 EP400Q96L91 3159 aa25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 LOC102724428A0A0B4J2F2 783 aa25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 PI4KAP2A4QPH2 592 aa25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 ZBTB7BO15156 539 aaPredicted RBP25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 A1BGP04217 495 aa25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 PIP4K2AP48426 406 aaPredicted RBP25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 SIK1P57059 783 aa25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 SLC4A10Q6U841 1118 aa25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 PI4KAP1Q8N8J0 262 aa25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 ZBTB40Q9NUA8 1239 aa25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 NUP188Q5SRE5 1749 aa25.24■■□□□ 1.63
ECHDC2-202ENST00000371520 ATP10DQ9P241 1426 aa25.23■■□□□ 1.63
ECHDC2-202ENST00000371520 DDX58O95786 925 aaKnown RBP25.23■■□□□ 1.63
ECHDC2-202ENST00000371520 CYP19A1P11511 503 aaPredicted RBP25.23■■□□□ 1.63
ECHDC2-202ENST00000371520 KSR2Q6VAB6 950 aa25.23■■□□□ 1.63
ECHDC2-202ENST00000371520 FAM196AQ6ZSG2 479 aa25.23■■□□□ 1.63
ECHDC2-202ENST00000371520 XAGE3Q8WTP9 111 aa25.23■■□□□ 1.63
ECHDC2-202ENST00000371520 DNAAF4Q8WXU2 420 aa25.23■■□□□ 1.63
ECHDC2-202ENST00000371520 COPS6Q7L5N1 327 aa25.22■■□□□ 1.63
ECHDC2-202ENST00000371520 AIMP1Q12904 312 aaKnown RBP25.21■■□□□ 1.63
ECHDC2-202ENST00000371520 POTEAQ6S8J7 498 aa25.21■■□□□ 1.63
ECHDC2-202ENST00000371520 MYH14Q7Z406 1995 aaKnown RBP25.19■■□□□ 1.62
ECHDC2-202ENST00000371520 ATP6V1AP38606 617 aa25.19■■□□□ 1.62
ECHDC2-202ENST00000371520 BCL11BQ9C0K0 894 aaPredicted RBP25.19■■□□□ 1.62
ECHDC2-202ENST00000371520 MAP3K2Q9Y2U5 619 aa25.19■■□□□ 1.62
ECHDC2-202ENST00000371520 TAF1LQ8IZX4 1826 aa25.18■■□□□ 1.62
ECHDC2-202ENST00000371520 ITPK1Q13572 414 aa25.18■■□□□ 1.62
ECHDC2-202ENST00000371520 PCDHB15Q9Y5E8 787 aa25.18■■□□□ 1.62
ECHDC2-202ENST00000371520 BEND3Q5T5X7 828 aa25.17■■□□□ 1.62
ECHDC2-202ENST00000371520 AFDNP55196 1824 aaKnown RBP25.17■■□□□ 1.62
ECHDC2-202ENST00000371520 ANKRD13DQ6ZTN6 518 aa25.16■■□□□ 1.62
ECHDC2-202ENST00000371520 SRCIN1Q9C0H9 1055 aa25.16■■□□□ 1.62
ECHDC2-202ENST00000371520 RIC3Q7Z5B4 369 aa25.15■■□□□ 1.62
ECHDC2-202ENST00000371520 ZBTB1Q9Y2K1 713 aa25.15■■□□□ 1.62
ECHDC2-202ENST00000371520 KDM2BQ8NHM5 1336 aa25.15■■□□□ 1.62
ECHDC2-202ENST00000371520 PLBD2Q8NHP8 589 aa25.15■■□□□ 1.62
ECHDC2-202ENST00000371520 MEIS3Q99687 375 aa25.15■■□□□ 1.62
ECHDC2-202ENST00000371520 IBTKQ9P2D0 1353 aaPredicted RBP25.14■■□□□ 1.61
ECHDC2-202ENST00000371520 TTLL7Q6ZT98 887 aa25.13■■□□□ 1.61
ECHDC2-202ENST00000371520 CCDC87Q9NVE4 849 aa25.13■■□□□ 1.61
ECHDC2-202ENST00000371520 CRKLP46109 303 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms