RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ITGB4P16144 1822 aa22.02■■□□□ 1.12
SSBP3-203ENST00000371319 SPATA31A1Q5TZJ5 1347 aa22.01■■□□□ 1.11
SSBP3-203ENST00000371319 NUCB1Q02818 461 aa22.01■■□□□ 1.11
SSBP3-203ENST00000371319 RPAP2Q8IXW5 612 aaPredicted RBP22.01■■□□□ 1.11
SSBP3-203ENST00000371319 GCC1Q96CN9 775 aa22.01■■□□□ 1.11
SSBP3-203ENST00000371319 JCADQ9P266 1359 aa22.01■■□□□ 1.11
SSBP3-203ENST00000371319 CERKQ8TCT0 537 aa22■■□□□ 1.11
SSBP3-203ENST00000371319 DNAAF4Q8WXU2 420 aa22■■□□□ 1.11
SSBP3-203ENST00000371319 PI4KAP2A4QPH2 592 aa21.99■■□□□ 1.11
SSBP3-203ENST00000371319 PI4KAP1Q8N8J0 262 aa21.99■■□□□ 1.11
SSBP3-203ENST00000371319 BEND3Q5T5X7 828 aa21.99■■□□□ 1.11
SSBP3-203ENST00000371319 THRAP3Q9Y2W1 955 aaKnown RBP21.99■■□□□ 1.11
SSBP3-203ENST00000371319 USP16Q9Y5T5 823 aa21.99■■□□□ 1.11
SSBP3-203ENST00000371319 GNAI3P08754 354 aa21.98■■□□□ 1.11
SSBP3-203ENST00000371319 FAM161AQ3B820 660 aa21.98■■□□□ 1.11
SSBP3-203ENST00000371319 C8orf34Q49A92 452 aa21.98■■□□□ 1.11
SSBP3-203ENST00000371319 SPATA31A5Q5VU36 1347 aa21.97■■□□□ 1.11
SSBP3-203ENST00000371319 SPATA31A7Q8IWB4 1347 aa21.97■■□□□ 1.11
SSBP3-203ENST00000371319 GNAI2P04899 355 aa21.97■■□□□ 1.11
SSBP3-203ENST00000371319 KSR2Q6VAB6 950 aa21.97■■□□□ 1.11
SSBP3-203ENST00000371319 LRP10Q7Z4F1 713 aa21.97■■□□□ 1.11
SSBP3-203ENST00000371319 SRCIN1Q9C0H9 1055 aa21.97■■□□□ 1.11
SSBP3-203ENST00000371319 USP44Q9H0E7 712 aa21.97■■□□□ 1.11
SSBP3-203ENST00000371319 DCTPP1Q9H773 170 aa21.97■■□□□ 1.11
SSBP3-203ENST00000371319 EXOC5O00471 708 aa21.96■■□□□ 1.11
SSBP3-203ENST00000371319 CDCA7Q9BWT1 371 aaPredicted RBP21.96■■□□□ 1.11
SSBP3-203ENST00000371319 CHD1LQ86WJ1 897 aa21.95■■□□□ 1.11
SSBP3-203ENST00000371319 TMOD3Q9NYL9 352 aa21.95■■□□□ 1.11
SSBP3-203ENST00000371319 MAP3K2Q9Y2U5 619 aa21.95■■□□□ 1.11
SSBP3-203ENST00000371319 DOT1LQ8TEK3 1739 aa21.94■■□□□ 1.1
SSBP3-203ENST00000371319 MYL6BP14649 208 aa21.93■■□□□ 1.1
SSBP3-203ENST00000371319 PIGBQ92521 554 aa21.93■■□□□ 1.1
SSBP3-203ENST00000371319 DDX58O95786 925 aaKnown RBP21.92■■□□□ 1.1
SSBP3-203ENST00000371319 ANKRD45Q5TZF3 282 aa21.92■■□□□ 1.1
SSBP3-203ENST00000371319 XAGE3Q8WTP9 111 aa21.92■■□□□ 1.1
SSBP3-203ENST00000371319 LNPKQ9C0E8 428 aa21.92■■□□□ 1.1
SSBP3-203ENST00000371319 ALDH1L1O75891 902 aa21.91■■□□□ 1.1
SSBP3-203ENST00000371319 AIMP1Q12904 312 aaKnown RBP21.91■■□□□ 1.1
SSBP3-203ENST00000371319 BARGINQ6ZT62 677 aa21.91■■□□□ 1.1
SSBP3-203ENST00000371319 LRRFIP2Q9Y608 721 aaKnown RBP21.91■■□□□ 1.1
SSBP3-203ENST00000371319 ERBB4Q15303 1308 aa21.91■■□□□ 1.1
SSBP3-203ENST00000371319 BCL9O00512 1426 aa21.91■■□□□ 1.1
SSBP3-203ENST00000371319 BCL9LQ86UU0 1499 aa21.91■■□□□ 1.1
SSBP3-203ENST00000371319 UBTFL1P0CB47 393 aaPredicted RBP21.91■■□□□ 1.1
SSBP3-203ENST00000371319 UNC5CLQ8IV45 518 aa21.91■■□□□ 1.1
SSBP3-203ENST00000371319 ARFGEF2Q9Y6D5 1785 aa21.9■■□□□ 1.1
SSBP3-203ENST00000371319 HMMRO75330 724 aa21.9■■□□□ 1.1
SSBP3-203ENST00000371319 PIP4K2AP48426 406 aaPredicted RBP21.9■■□□□ 1.1
SSBP3-203ENST00000371319 ATP8B2P98198 1209 aa21.9■■□□□ 1.1
SSBP3-203ENST00000371319 COPS6Q7L5N1 327 aa21.9■■□□□ 1.1
SSBP3-203ENST00000371319 ATG3Q9NT62 314 aa21.9■■□□□ 1.1
SSBP3-203ENST00000371319 SPATA31A6Q5VVP1 1343 aa21.9■■□□□ 1.1
SSBP3-203ENST00000371319 PTCD1O75127 700 aaKnown RBP21.89■■□□□ 1.09
SSBP3-203ENST00000371319 ASAP1Q9ULH1 1129 aa21.89■■□□□ 1.09
SSBP3-203ENST00000371319 NBPF26B4DH59 902 aa21.88■■□□□ 1.09
SSBP3-203ENST00000371319 DDB1Q16531 1140 aa21.88■■□□□ 1.09
SSBP3-203ENST00000371319 NBPF14Q5TI25 921 aa21.88■■□□□ 1.09
SSBP3-203ENST00000371319 NBPF10Q6P3W6 841 aaKnown RBP21.88■■□□□ 1.09
SSBP3-203ENST00000371319 NBPF15Q8N660 670 aa21.88■■□□□ 1.09
SSBP3-203ENST00000371319 C8orf37Q96NL8 207 aa21.88■■□□□ 1.09
SSBP3-203ENST00000371319 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.88■■□□□ 1.09
SSBP3-203ENST00000371319 IBTKQ9P2D0 1353 aaPredicted RBP21.87■■□□□ 1.09
SSBP3-203ENST00000371319 NBPF7P0C2Y1 421 aaPredicted RBP21.87■■□□□ 1.09
SSBP3-203ENST00000371319 PNMA6EA0A0J9YXQ4 647 aa21.87■■□□□ 1.09
SSBP3-203ENST00000371319 VPS72Q15906 364 aa21.87■■□□□ 1.09
SSBP3-203ENST00000371319 RIC3Q7Z5B4 369 aa21.87■■□□□ 1.09
SSBP3-203ENST00000371319 LINS1Q8NG48 757 aa21.87■■□□□ 1.09
SSBP3-203ENST00000371319 CCDC9Q9Y3X0 531 aaKnown RBP21.87■■□□□ 1.09
SSBP3-203ENST00000371319 NUP188Q5SRE5 1749 aa21.86■■□□□ 1.09
SSBP3-203ENST00000371319 CWF19L2Q2TBE0 894 aaKnown RBP21.86■■□□□ 1.09
SSBP3-203ENST00000371319 FNBP4Q8N3X1 1017 aaPredicted RBP21.86■■□□□ 1.09
SSBP3-203ENST00000371319 NGLY1Q96IV0 654 aa21.86■■□□□ 1.09
SSBP3-203ENST00000371319 IGKV5-2P06315 115 aa21.85■■□□□ 1.09
SSBP3-203ENST00000371319 VSIG10Q8N0Z9 540 aa21.85■■□□□ 1.09
SSBP3-203ENST00000371319 MARCH10Q8NA82 808 aaPredicted RBP21.85■■□□□ 1.09
SSBP3-203ENST00000371319 METTL22Q9BUU2 404 aaPredicted RBP21.85■■□□□ 1.09
SSBP3-203ENST00000371319 UTYO14607 1347 aa21.84■■□□□ 1.09
SSBP3-203ENST00000371319 AFDNP55196 1824 aaKnown RBP21.84■■□□□ 1.09
SSBP3-203ENST00000371319 A1BGP04217 495 aa21.84■■□□□ 1.09
SSBP3-203ENST00000371319 ANKRD13DQ6ZTN6 518 aa21.84■■□□□ 1.09
SSBP3-203ENST00000371319 HSPA1LP34931 641 aa21.82■■□□□ 1.08
SSBP3-203ENST00000371319 SSH3Q8TE77 659 aa21.82■■□□□ 1.08
SSBP3-203ENST00000371319 TJP1Q07157 1748 aa21.82■■□□□ 1.08
SSBP3-203ENST00000371319 PRIM1P49642 420 aaKnown RBP21.82■■□□□ 1.08
SSBP3-203ENST00000371319 POLA2Q14181 598 aa21.82■■□□□ 1.08
SSBP3-203ENST00000371319 MYD88Q99836 296 aa21.82■■□□□ 1.08
SSBP3-203ENST00000371319 NEURL1BA8MQ27 555 aa21.81■■□□□ 1.08
SSBP3-203ENST00000371319 DNAJC10Q8IXB1 793 aa21.81■■□□□ 1.08
SSBP3-203ENST00000371319 PLBD2Q8NHP8 589 aa21.81■■□□□ 1.08
SSBP3-203ENST00000371319 TEX13AQ9BXU3 409 aaPredicted RBP21.81■■□□□ 1.08
SSBP3-203ENST00000371319 C9orf78Q9NZ63 289 aaPredicted RBP21.81■■□□□ 1.08
SSBP3-203ENST00000371319 GRM8O00222 908 aa21.8■■□□□ 1.08
SSBP3-203ENST00000371319 SMARCA5O60264 1052 aaPredicted RBP21.8■■□□□ 1.08
SSBP3-203ENST00000371319 NEXNQ0ZGT2 675 aa21.8■■□□□ 1.08
SSBP3-203ENST00000371319 PPP1R42Q7Z4L9 355 aa21.8■■□□□ 1.08
SSBP3-203ENST00000371319 PLEKHM2Q8IWE5 1019 aa21.79■■□□□ 1.08
SSBP3-203ENST00000371319 SLC4A9Q96Q91 983 aa21.79■■□□□ 1.08
SSBP3-203ENST00000371319 RBM42Q9BTD8 480 aaKnown RBP21.79■■□□□ 1.08
SSBP3-203ENST00000371319 EXOC6BQ9Y2D4 811 aa21.79■■□□□ 1.08
SSBP3-203ENST00000371319 FAM98CQ17RN3 349 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms