RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 AATKQ6ZMQ8 1374 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 ANO2Q9NQ90 1003 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 ATP7BP35670 1465 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 F6X3S4 739 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 FIBPO43427 364 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 GABPB1Q06547 395 aaPredicted RBP14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 PRAM1Q96QH2 718 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 MON2Q7Z3U7 1717 aa14.03□□□□□ -0.16
SMARCA1-201ENST00000371121 C3P01024 1663 aa14.02□□□□□ -0.16
SMARCA1-201ENST00000371121 TULP2O00295 520 aa14.02□□□□□ -0.16
SMARCA1-201ENST00000371121 AK2P54819 239 aa14.02□□□□□ -0.16
SMARCA1-201ENST00000371121 DIAPH3Q9NSV4 1193 aa14.02□□□□□ -0.16
SMARCA1-201ENST00000371121 MTMR6Q9Y217 621 aa14.02□□□□□ -0.16
SMARCA1-201ENST00000371121 SNX14Q9Y5W7 946 aa14.02□□□□□ -0.16
SMARCA1-201ENST00000371121 CRB1P82279 1406 aa14.02□□□□□ -0.16
SMARCA1-201ENST00000371121 CHD2O14647 1828 aaKnown RBP14.02□□□□□ -0.17
SMARCA1-201ENST00000371121 STX6O43752 255 aa14.02□□□□□ -0.17
SMARCA1-201ENST00000371121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.02□□□□□ -0.179e-8■■■□□ 14.8
SMARCA1-201ENST00000371121 CHL1O00533 1208 aa14.02□□□□□ -0.17
SMARCA1-201ENST00000371121 ARID5BQ14865 1188 aa14.02□□□□□ -0.17
SMARCA1-201ENST00000371121 ZSCAN25Q6NSZ9 544 aa14.02□□□□□ -0.17
SMARCA1-201ENST00000371121 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.17
SMARCA1-201ENST00000371121 CCDC186Q7Z3E2 898 aa14.01□□□□□ -0.17
SMARCA1-201ENST00000371121 AEBP1Q8IUX7 1158 aa14.01□□□□□ -0.17
SMARCA1-201ENST00000371121 CACTINQ8WUQ7 758 aaKnown RBP14.01□□□□□ -0.17
SMARCA1-201ENST00000371121 STAP2Q9UGK3 403 aa14.01□□□□□ -0.17
SMARCA1-201ENST00000371121 SMTNL1A8MU46 457 aa14.01□□□□□ -0.17
SMARCA1-201ENST00000371121 LIG1P18858 919 aa14.01□□□□□ -0.17
SMARCA1-201ENST00000371121 IDI1Q13907 227 aa14.01□□□□□ -0.17
SMARCA1-201ENST00000371121 PLCB2Q00722 1185 aa14□□□□□ -0.17
SMARCA1-201ENST00000371121 ALKQ9UM73 1620 aa14□□□□□ -0.17
SMARCA1-201ENST00000371121 ZNF771Q7L3S4 317 aaPredicted RBP14□□□□□ -0.17
SMARCA1-201ENST00000371121 LRRN4CLQ8ND94 238 aa14□□□□□ -0.17
SMARCA1-201ENST00000371121 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
SMARCA1-201ENST00000371121 TTC6Q86TZ1 520 aa13.99□□□□□ -0.17
SMARCA1-201ENST00000371121 CDK19Q9BWU1 502 aa13.99□□□□□ -0.17
SMARCA1-201ENST00000371121 LSG1Q9H089 658 aaKnown RBP13.99□□□□□ -0.17
SMARCA1-201ENST00000371121 FBXO38Q6PIJ6 1188 aa13.99□□□□□ -0.17
SMARCA1-201ENST00000371121 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMARCA1-201ENST00000371121 MCM10Q7L590 875 aa13.99□□□□□ -0.17
SMARCA1-201ENST00000371121 HYPKQ9NX55 129 aa13.99□□□□□ -0.17
SMARCA1-201ENST00000371121 MYH15Q9Y2K3 1946 aa13.99□□□□□ -0.17
SMARCA1-201ENST00000371121 AKAP12Q02952 1782 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 NYAP1Q6ZVC0 841 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 PTPRCP08575 1304 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 FAM173BQ6P4H8 233 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 RBM43Q6ZSC3 357 aaKnown RBP13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 PI4K2BQ8TCG2 481 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 CBX8Q9HC52 389 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.98□□□□□ -0.179e-7■□□□□ 10
SMARCA1-201ENST00000371121 V9GYY5 206 aaPredicted RBP13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 ADCY9O60503 1353 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 RAD50Q92878 1312 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 ADCK5Q3MIX3 580 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 NME9Q86XW9 330 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 ITSN1Q15811 1721 aa13.98□□□□□ -0.17
SMARCA1-201ENST00000371121 RRS1Q15050 365 aaKnown RBP13.97□□□□□ -0.17
SMARCA1-201ENST00000371121 RILPL2Q969X0 211 aa13.97□□□□□ -0.17
SMARCA1-201ENST00000371121 CAMK4Q16566 473 aa13.97□□□□□ -0.17
SMARCA1-201ENST00000371121 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
SMARCA1-201ENST00000371121 ZNF215Q9UL58 517 aaPredicted RBP13.97□□□□□ -0.17
SMARCA1-201ENST00000371121 TNNT1P13805 278 aa13.97□□□□□ -0.17
SMARCA1-201ENST00000371121 FAM200AQ8TCP9 573 aa13.97□□□□□ -0.17
SMARCA1-201ENST00000371121 IPO4Q8TEX9 1081 aaKnown RBP13.97□□□□□ -0.17
SMARCA1-201ENST00000371121 TTC21AQ8NDW8 1320 aa13.96□□□□□ -0.17
SMARCA1-201ENST00000371121 MAP4K4O95819 1239 aaPredicted RBP13.96□□□□□ -0.17
SMARCA1-201ENST00000371121 TYRO3Q06418 890 aa13.96□□□□□ -0.17
SMARCA1-201ENST00000371121 TAF3Q5VWG9 929 aa13.96□□□□□ -0.17
SMARCA1-201ENST00000371121 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
SMARCA1-201ENST00000371121 KCNJ4P48050 445 aa13.96□□□□□ -0.17
SMARCA1-201ENST00000371121 ZNF75DP51815 510 aa13.96□□□□□ -0.17
SMARCA1-201ENST00000371121 KIF1BPQ96EK5 621 aa13.96□□□□□ -0.17
SMARCA1-201ENST00000371121 LRRC37A3O60309 1634 aa13.95□□□□□ -0.18
SMARCA1-201ENST00000371121 VGFO15240 615 aaPredicted RBP13.95□□□□□ -0.18
SMARCA1-201ENST00000371121 SGSM2O43147 1006 aa13.95□□□□□ -0.18
SMARCA1-201ENST00000371121 GJB2P29033 226 aa13.95□□□□□ -0.18
SMARCA1-201ENST00000371121 KLHL34Q8N239 644 aa13.95□□□□□ -0.18
SMARCA1-201ENST00000371121 LRRCC1Q9C099 1032 aa13.95□□□□□ -0.18
SMARCA1-201ENST00000371121 NCKAP5LQ9HCH0 1330 aa13.95□□□□□ -0.18
SMARCA1-201ENST00000371121 SLC20A2Q08357 652 aa13.94□□□□□ -0.18
SMARCA1-201ENST00000371121 ANO6Q4KMQ2 910 aa13.94□□□□□ -0.18
SMARCA1-201ENST00000371121 CKAP2LQ8IYA6 745 aa13.94□□□□□ -0.18
SMARCA1-201ENST00000371121 CDC37L1Q7L3B6 337 aa13.94□□□□□ -0.18
SMARCA1-201ENST00000371121 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
SMARCA1-201ENST00000371121 DLC1Q96QB1 1528 aa13.94□□□□□ -0.18
SMARCA1-201ENST00000371121 GGT6Q6P531 493 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 PLCD3Q8N3E9 789 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 FHOD1Q9Y613 1164 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 TRIM6-TRIM34B2RNG4 842 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 FANCGO15287 622 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 ME3Q16798 604 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 LIMCH1Q9UPQ0 1083 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 TPM3P06753 285 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 CHAF1AQ13111 956 aaPredicted RBP13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 CCDC83Q8IWF9 413 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 TDRD7Q8NHU6 1098 aaKnown RBP13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 NALCNQ8IZF0 1738 aa13.93□□□□□ -0.18
SMARCA1-201ENST00000371121 CCDC192P0DO97 292 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms