RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 USPL1Q5W0Q7 1092 aa14.7□□□□□ -0.06
EXOSC1-202ENST00000370885 VSIG10Q8N0Z9 540 aa14.7□□□□□ -0.06
EXOSC1-202ENST00000370885 PLEKHF1Q96S99 279 aa14.7□□□□□ -0.06
EXOSC1-202ENST00000370885 A0A0G2JLW4 131 aa14.69□□□□□ -0.06
EXOSC1-202ENST00000370885 PRAMEF22A3QJZ6 481 aa14.69□□□□□ -0.06
EXOSC1-202ENST00000370885 KCNA3P22001 575 aa14.69□□□□□ -0.06
EXOSC1-202ENST00000370885 HEG1Q9ULI3 1381 aa14.69□□□□□ -0.06
EXOSC1-202ENST00000370885 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
EXOSC1-202ENST00000370885 CANXP27824 592 aaKnown RBP14.68□□□□□ -0.06
EXOSC1-202ENST00000370885 COL15A1P39059 1388 aa14.68□□□□□ -0.06
EXOSC1-202ENST00000370885 BRCA1P38398 1863 aaKnown RBP14.67□□□□□ -0.06
EXOSC1-202ENST00000370885 POLRMTO00411 1230 aaKnown RBP14.67□□□□□ -0.06
EXOSC1-202ENST00000370885 GRIN3BO60391 1043 aa14.67□□□□□ -0.06
EXOSC1-202ENST00000370885 DPEP1P16444 411 aa14.67□□□□□ -0.06
EXOSC1-202ENST00000370885 EIF5P55010 431 aaKnown RBP14.67□□□□□ -0.06
EXOSC1-202ENST00000370885 TTC5Q8N0Z6 440 aa14.67□□□□□ -0.06
EXOSC1-202ENST00000370885 NARFQ9UHQ1 456 aa14.67□□□□□ -0.06
EXOSC1-202ENST00000370885 BTBD11A6QL63 1104 aa14.66□□□□□ -0.06
EXOSC1-202ENST00000370885 A1BGP04217 495 aa14.66□□□□□ -0.06
EXOSC1-202ENST00000370885 MIS18AQ9NYP9 233 aa14.66□□□□□ -0.06
EXOSC1-202ENST00000370885 USP16Q9Y5T5 823 aa14.66□□□□□ -0.06
EXOSC1-202ENST00000370885 PARP3Q9Y6F1 533 aa14.66□□□□□ -0.06
EXOSC1-202ENST00000370885 AFDNP55196 1824 aaKnown RBP14.66□□□□□ -0.06
EXOSC1-202ENST00000370885 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
EXOSC1-202ENST00000370885 TGFB2P61812 414 aa14.65□□□□□ -0.06
EXOSC1-202ENST00000370885 NFIXQ14938 502 aa14.65□□□□□ -0.06
EXOSC1-202ENST00000370885 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
EXOSC1-202ENST00000370885 ZPR1O75312 459 aa14.64□□□□□ -0.07
EXOSC1-202ENST00000370885 FMNL2Q96PY5 1086 aa14.64□□□□□ -0.07
EXOSC1-202ENST00000370885 THUMPD2Q9BTF0 503 aaKnown RBP14.64□□□□□ -0.07
EXOSC1-202ENST00000370885 NRXN2Q9P2S2 1712 aa14.63□□□□□ -0.07
EXOSC1-202ENST00000370885 STARD3NLO95772 234 aa14.63□□□□□ -0.07
EXOSC1-202ENST00000370885 CHRNA5P30532 468 aa14.63□□□□□ -0.07
EXOSC1-202ENST00000370885 TBC1D2BQ9UPU7 963 aa14.63□□□□□ -0.07
EXOSC1-202ENST00000370885 ADCY9O60503 1353 aa14.62□□□□□ -0.07
EXOSC1-202ENST00000370885 HTATSF1O43719 755 aaKnown RBP14.62□□□□□ -0.07
EXOSC1-202ENST00000370885 CARMIL3Q8ND23 1372 aa14.61□□□□□ -0.07
EXOSC1-202ENST00000370885 NBPF26B4DH59 902 aa14.61□□□□□ -0.07
EXOSC1-202ENST00000370885 RALBP1Q15311 655 aa14.61□□□□□ -0.07
EXOSC1-202ENST00000370885 TBC1D9BQ66K14 1250 aa14.61□□□□□ -0.07
EXOSC1-202ENST00000370885 NBPF10Q6P3W6 841 aaKnown RBP14.61□□□□□ -0.07
EXOSC1-202ENST00000370885 NBPF15Q8N660 670 aa14.61□□□□□ -0.07
EXOSC1-202ENST00000370885 RTF1Q92541 710 aaKnown RBP14.61□□□□□ -0.07
EXOSC1-202ENST00000370885 BCS1LQ9Y276 419 aa14.61□□□□□ -0.07
EXOSC1-202ENST00000370885 SCN7AQ01118 1682 aa14.61□□□□□ -0.07
EXOSC1-202ENST00000370885 ATP10DQ9P241 1426 aa14.6□□□□□ -0.07
EXOSC1-202ENST00000370885 SERPINB2P05120 415 aa14.6□□□□□ -0.07
EXOSC1-202ENST00000370885 IL6STP40189 918 aaPredicted RBP14.6□□□□□ -0.07
EXOSC1-202ENST00000370885 TAF7Q15545 349 aaPredicted RBP14.6□□□□□ -0.07
EXOSC1-202ENST00000370885 NFE2L2Q16236 605 aa14.6□□□□□ -0.07
EXOSC1-202ENST00000370885 BICDL1Q6ZP65 573 aa14.6□□□□□ -0.07
EXOSC1-202ENST00000370885 TEX13AQ9BXU3 409 aaPredicted RBP14.6□□□□□ -0.07
EXOSC1-202ENST00000370885 KDM3BQ7LBC6 1761 aa14.6□□□□□ -0.07
EXOSC1-202ENST00000370885 CAMTA2O94983 1202 aa14.59□□□□□ -0.07
EXOSC1-202ENST00000370885 CCDC24Q8N4L8 307 aa14.59□□□□□ -0.07
EXOSC1-202ENST00000370885 ZNF330Q9Y3S2 320 aaPredicted RBP14.59□□□□□ -0.07
EXOSC1-202ENST00000370885 ANKRD31Q8N7Z5 1873 aa14.59□□□□□ -0.07
EXOSC1-202ENST00000370885 ARFGEF1Q9Y6D6 1849 aa14.58□□□□□ -0.08
EXOSC1-202ENST00000370885 SNRPA1P09661 255 aaKnown RBP14.58□□□□□ -0.08
EXOSC1-202ENST00000370885 BCORQ6W2J9 1755 aa14.57□□□□□ -0.08
EXOSC1-202ENST00000370885 A0A087WZG4 1122 aa14.57□□□□□ -0.08
EXOSC1-202ENST00000370885 MYBBP1AQ9BQG0 1328 aaKnown RBP14.57□□□□□ -0.08
EXOSC1-202ENST00000370885 EIF4A1P60842 406 aaKnown RBP14.56□□□□□ -0.08
EXOSC1-202ENST00000370885 ARHGAP27Q6ZUM4 889 aa14.56□□□□□ -0.08
EXOSC1-202ENST00000370885 PIM2Q9P1W9 311 aa14.56□□□□□ -0.08
EXOSC1-202ENST00000370885 DLEC1Q9Y238 1755 aa14.55□□□□□ -0.08
EXOSC1-202ENST00000370885 GIGYF1O75420 1035 aaPredicted RBP14.55□□□□□ -0.08
EXOSC1-202ENST00000370885 DZIP3Q86Y13 1208 aaKnown RBP14.55□□□□□ -0.08
EXOSC1-202ENST00000370885 CCDC146Q8IYE0 955 aa14.55□□□□□ -0.08
EXOSC1-202ENST00000370885 ZNF526Q8TF50 670 aaPredicted RBP14.55□□□□□ -0.08
EXOSC1-202ENST00000370885 RRP7AQ9Y3A4 280 aaKnown RBP14.55□□□□□ -0.08
EXOSC1-202ENST00000370885 TMPOP42166 694 aaKnown RBP14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 PRELPP51888 382 aa14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 RIPK4P57078 832 aa14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 C1QTNF8P60827 252 aa14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 DALRD3Q5D0E6 543 aaKnown RBP14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 PRR5LQ6MZQ0 368 aa14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 PRKRIP1Q9H875 184 aaPredicted RBP14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 COL11A2P13942 1736 aaPredicted RBP14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 LAMB4A4D0S4 1761 aa14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 CEP350Q5VT06 3117 aa14.54□□□□□ -0.08
EXOSC1-202ENST00000370885 MAPK8IP3Q9UPT6 1336 aa14.53□□□□□ -0.08
EXOSC1-202ENST00000370885 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
EXOSC1-202ENST00000370885 ADAMTS8Q9UP79 889 aa14.53□□□□□ -0.08
EXOSC1-202ENST00000370885 SBF1O95248 1867 aa14.52□□□□□ -0.08
EXOSC1-202ENST00000370885 HLFQ16534 295 aa14.52□□□□□ -0.09
EXOSC1-202ENST00000370885 C2CD5Q86YS7 1000 aa14.52□□□□□ -0.09
EXOSC1-202ENST00000370885 NEFMP07197 916 aa14.51□□□□□ -0.09
EXOSC1-202ENST00000370885 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
EXOSC1-202ENST00000370885 RASSF7Q02833 373 aa14.5□□□□□ -0.09
EXOSC1-202ENST00000370885 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
EXOSC1-202ENST00000370885 CCDC184Q52MB2 194 aa14.5□□□□□ -0.09
EXOSC1-202ENST00000370885 C9orf131Q5VYM1 1079 aa14.5□□□□□ -0.09
EXOSC1-202ENST00000370885 TTLL7Q6ZT98 887 aa14.5□□□□□ -0.09
EXOSC1-202ENST00000370885 PNISRQ8TF01 805 aaKnown RBP14.5□□□□□ -0.09
EXOSC1-202ENST00000370885 SETDB2Q96T68 719 aa14.5□□□□□ -0.09
EXOSC1-202ENST00000370885 PNNQ9H307 717 aaKnown RBP14.5□□□□□ -0.09
EXOSC1-202ENST00000370885 KIF3CO14782 793 aa14.49□□□□□ -0.09
EXOSC1-202ENST00000370885 KRT24Q2M2I5 525 aa14.49□□□□□ -0.09
EXOSC1-202ENST00000370885 LRP10Q7Z4F1 713 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms