RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 DBF4Q9UBU7 674 aaPredicted RBP12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 SIPA1L3O60292 1781 aaPredicted RBP12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 HMMRO75330 724 aa12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 MCM4P33991 863 aa12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 CEP85Q6P2H3 762 aa12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 ZHX1Q9UKY1 873 aaPredicted RBP12.33□□□□□ -0.44
PRPF38B-203ENST00000370025 GNAI2P04899 355 aa12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 CYP27B1O15528 508 aa12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 ZNF790Q6PG37 636 aa12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 NFATC2IPQ8NCF5 419 aa12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 CARD10Q9BWT7 1032 aa12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 COL5A2P05997 1499 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 ABCA3Q99758 1704 aa12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 KDM6AO15550 1401 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 GRPEL1Q9HAV7 217 aa12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 STRN4Q9NRL3 753 aa12.32□□□□□ -0.44
PRPF38B-203ENST00000370025 HEG1Q9ULI3 1381 aa12.31□□□□□ -0.44
PRPF38B-203ENST00000370025 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
PRPF38B-203ENST00000370025 PXDNLA1KZ92 1463 aa12.31□□□□□ -0.44
PRPF38B-203ENST00000370025 ZCRB1Q8TBF4 217 aaKnown RBP12.31□□□□□ -0.44
PRPF38B-203ENST00000370025 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
PRPF38B-203ENST00000370025 IL2RBP14784 551 aa12.3□□□□□ -0.44
PRPF38B-203ENST00000370025 CABP4P57796 275 aa12.3□□□□□ -0.44
PRPF38B-203ENST00000370025 TTC5Q8N0Z6 440 aa12.3□□□□□ -0.44
PRPF38B-203ENST00000370025 PCDH11XQ9BZA7 1347 aa12.3□□□□□ -0.44
PRPF38B-203ENST00000370025 PCDH11YQ9BZA8 1340 aa12.3□□□□□ -0.44
PRPF38B-203ENST00000370025 PARP4Q9UKK3 1724 aaKnown RBP12.3□□□□□ -0.44
PRPF38B-203ENST00000370025 SLC39A6Q13433 755 aa12.3□□□□□ -0.44
PRPF38B-203ENST00000370025 SRCIN1Q9C0H9 1055 aa12.3□□□□□ -0.44
PRPF38B-203ENST00000370025 APBB1O00213 710 aa12.29□□□□□ -0.44
PRPF38B-203ENST00000370025 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
PRPF38B-203ENST00000370025 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
PRPF38B-203ENST00000370025 HYPKQ9NX55 129 aa12.29□□□□□ -0.44
PRPF38B-203ENST00000370025 LARP1Q6PKG0 1096 aaKnown RBP12.29□□□□□ -0.44
PRPF38B-203ENST00000370025 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
PRPF38B-203ENST00000370025 ANXA1P04083 346 aa12.29□□□□□ -0.44
PRPF38B-203ENST00000370025 MRE11P49959 708 aa12.29□□□□□ -0.44
PRPF38B-203ENST00000370025 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
PRPF38B-203ENST00000370025 UBTFL1P0CB47 393 aaPredicted RBP12.28□□□□□ -0.44
PRPF38B-203ENST00000370025 ROBO1Q9Y6N7 1651 aa12.28□□□□□ -0.44
PRPF38B-203ENST00000370025 PDCL3Q9H2J4 239 aa12.28□□□□□ -0.44
PRPF38B-203ENST00000370025 R3HCC1Q9Y3T6 440 aaKnown RBP12.28□□□□□ -0.44
PRPF38B-203ENST00000370025 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
PRPF38B-203ENST00000370025 DDX21Q9NR30 783 aaKnown RBP eCLIP12.27□□□□□ -0.44
PRPF38B-203ENST00000370025 MRC1P22897 1456 aa12.27□□□□□ -0.44
PRPF38B-203ENST00000370025 PRAMEF22A3QJZ6 481 aa12.27□□□□□ -0.45
PRPF38B-203ENST00000370025 DDX58O95786 925 aaKnown RBP12.27□□□□□ -0.45
PRPF38B-203ENST00000370025 FMNL2Q96PY5 1086 aa12.27□□□□□ -0.45
PRPF38B-203ENST00000370025 USP44Q9H0E7 712 aa12.27□□□□□ -0.45
PRPF38B-203ENST00000370025 ANTXR1Q9H6X2 564 aa12.27□□□□□ -0.45
PRPF38B-203ENST00000370025 SNRPA1P09661 255 aaKnown RBP12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 ATP8B2P98198 1209 aa12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 BMP2KLQ5H9B9 411 aa12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 KSR2Q6VAB6 950 aa12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 FSD2A1L4K1 749 aa12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 ERVV-2B6SEH9 535 aa12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 DDX54Q8TDD1 881 aaKnown RBP12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 LRRFIP2Q9Y608 721 aaKnown RBP12.26□□□□□ -0.45
PRPF38B-203ENST00000370025 PROSER3Q2NL68 480 aa12.25□□□□□ -0.45
PRPF38B-203ENST00000370025 GAS2L3Q86XJ1 694 aa12.25□□□□□ -0.45
PRPF38B-203ENST00000370025 LTBP4Q8N2S1 1624 aa12.25□□□□□ -0.45
PRPF38B-203ENST00000370025 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
PRPF38B-203ENST00000370025 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
PRPF38B-203ENST00000370025 ADCY9O60503 1353 aa12.24□□□□□ -0.45
PRPF38B-203ENST00000370025 HDAC5Q9UQL6 1122 aa12.24□□□□□ -0.45
PRPF38B-203ENST00000370025 ALDH1L1O75891 902 aa12.24□□□□□ -0.45
PRPF38B-203ENST00000370025 AIMP1Q12904 312 aaKnown RBP12.24□□□□□ -0.45
PRPF38B-203ENST00000370025 NCLP19338 710 aaKnown RBP12.23□□□□□ -0.45
PRPF38B-203ENST00000370025 PLEKHM2Q8IWE5 1019 aa12.23□□□□□ -0.45
PRPF38B-203ENST00000370025 COL14A1Q05707 1796 aaKnown RBP12.23□□□□□ -0.45
PRPF38B-203ENST00000370025 MSNP26038 577 aaKnown RBP12.23□□□□□ -0.45
PRPF38B-203ENST00000370025 PDIA6Q15084 440 aa12.23□□□□□ -0.45
PRPF38B-203ENST00000370025 MYL6BP14649 208 aa12.22□□□□□ -0.45
PRPF38B-203ENST00000370025 RIC3Q7Z5B4 369 aa12.22□□□□□ -0.45
PRPF38B-203ENST00000370025 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
PRPF38B-203ENST00000370025 USP16Q9Y5T5 823 aa12.22□□□□□ -0.45
PRPF38B-203ENST00000370025 PNMA6EA0A0J9YXQ4 647 aa12.22□□□□□ -0.45
PRPF38B-203ENST00000370025 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
PRPF38B-203ENST00000370025 C5P01031 1676 aa12.22□□□□□ -0.45
PRPF38B-203ENST00000370025 SMARCA5O60264 1052 aaPredicted RBP12.22□□□□□ -0.45
PRPF38B-203ENST00000370025 TPM2P07951 284 aa12.22□□□□□ -0.45
PRPF38B-203ENST00000370025 TOM1O60784 492 aa12.21□□□□□ -0.45
PRPF38B-203ENST00000370025 NEXNQ0ZGT2 675 aa12.21□□□□□ -0.45
PRPF38B-203ENST00000370025 C16orf71Q8IYS4 520 aaPredicted RBP12.21□□□□□ -0.45
PRPF38B-203ENST00000370025 LINS1Q8NG48 757 aa12.21□□□□□ -0.45
PRPF38B-203ENST00000370025 EXOC6BQ9Y2D4 811 aa12.21□□□□□ -0.45
PRPF38B-203ENST00000370025 NBPF7P0C2Y1 421 aaPredicted RBP12.21□□□□□ -0.46
PRPF38B-203ENST00000370025 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.46
PRPF38B-203ENST00000370025 PRDM4Q9UKN5 801 aa12.21□□□□□ -0.46
PRPF38B-203ENST00000370025 SSH3Q8TE77 659 aa12.21□□□□□ -0.46
PRPF38B-203ENST00000370025 XAGE3Q8WTP9 111 aa12.21□□□□□ -0.46
PRPF38B-203ENST00000370025 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.46
PRPF38B-203ENST00000370025 COPS6Q7L5N1 327 aa12.2□□□□□ -0.46
PRPF38B-203ENST00000370025 PPP1R42Q7Z4L9 355 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms