RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 RARSP54136 660 aaKnown RBP11.31□□□□□ -0.6
SFR1-202ENST00000369729 C8orf58Q8NAV2 365 aa11.31□□□□□ -0.6
SFR1-202ENST00000369729 KIF16BQ96L93 1317 aa11.31□□□□□ -0.6
SFR1-202ENST00000369729 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
SFR1-202ENST00000369729 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
SFR1-202ENST00000369729 PIGBQ92521 554 aa11.3□□□□□ -0.6
SFR1-202ENST00000369729 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
SFR1-202ENST00000369729 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
SFR1-202ENST00000369729 SLC39A6Q13433 755 aa11.3□□□□□ -0.6
SFR1-202ENST00000369729 HDGFL1Q5TGJ6 251 aa11.3□□□□□ -0.6
SFR1-202ENST00000369729 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
SFR1-202ENST00000369729 ACSBG1Q96GR2 724 aa11.3□□□□□ -0.6
SFR1-202ENST00000369729 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
SFR1-202ENST00000369729 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
SFR1-202ENST00000369729 RRP1P56182 461 aaKnown RBP11.29□□□□□ -0.6
SFR1-202ENST00000369729 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
SFR1-202ENST00000369729 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
SFR1-202ENST00000369729 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
SFR1-202ENST00000369729 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
SFR1-202ENST00000369729 KDM3BQ7LBC6 1761 aa11.28□□□□□ -0.6
SFR1-202ENST00000369729 STARD3NLO95772 234 aa11.28□□□□□ -0.6
SFR1-202ENST00000369729 EIF2S2P20042 333 aaKnown RBP11.28□□□□□ -0.6
SFR1-202ENST00000369729 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
SFR1-202ENST00000369729 ZNF496Q96IT1 587 aaPredicted RBP11.28□□□□□ -0.6
SFR1-202ENST00000369729 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
SFR1-202ENST00000369729 HEG1Q9ULI3 1381 aa11.27□□□□□ -0.6
SFR1-202ENST00000369729 KCNQ3O43525 872 aa11.27□□□□□ -0.61
SFR1-202ENST00000369729 PTCD1O75127 700 aaKnown RBP11.27□□□□□ -0.61
SFR1-202ENST00000369729 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.61
SFR1-202ENST00000369729 NPM2Q86SE8 214 aaKnown RBP11.27□□□□□ -0.61
SFR1-202ENST00000369729 ARHGAP45Q92619 1136 aa11.27□□□□□ -0.61
SFR1-202ENST00000369729 FRAT1Q92837 279 aaPredicted RBP11.27□□□□□ -0.61
SFR1-202ENST00000369729 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.61
SFR1-202ENST00000369729 ATG3Q9NT62 314 aa11.27□□□□□ -0.61
SFR1-202ENST00000369729 ERBB4Q15303 1308 aa11.26□□□□□ -0.61
SFR1-202ENST00000369729 BCAR3O75815 825 aa11.26□□□□□ -0.61
SFR1-202ENST00000369729 KRT24Q2M2I5 525 aa11.26□□□□□ -0.61
SFR1-202ENST00000369729 POTEAQ6S8J7 498 aa11.26□□□□□ -0.61
SFR1-202ENST00000369729 FTSJ3Q8IY81 847 aaKnown RBP11.26□□□□□ -0.61
SFR1-202ENST00000369729 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
SFR1-202ENST00000369729 RGS17Q9UGC6 210 aaPredicted RBP11.26□□□□□ -0.61
SFR1-202ENST00000369729 ASAP1Q9ULH1 1129 aa11.26□□□□□ -0.61
SFR1-202ENST00000369729 DOT1LQ8TEK3 1739 aa11.26□□□□□ -0.61
SFR1-202ENST00000369729 KAT6BQ8WYB5 2073 aa11.26□□□□□ -0.61
SFR1-202ENST00000369729 PTPRCP08575 1304 aa11.26□□□□□ -0.61
SFR1-202ENST00000369729 RNF123Q5XPI4 1314 aa11.26□□□□□ -0.61
SFR1-202ENST00000369729 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
SFR1-202ENST00000369729 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
SFR1-202ENST00000369729 CHMP4BQ9H444 224 aaKnown RBP11.25□□□□□ -0.61
SFR1-202ENST00000369729 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
SFR1-202ENST00000369729 PALLDQ8WX93 1383 aa11.25□□□□□ -0.61
SFR1-202ENST00000369729 TOGARAM1Q9Y4F4 1720 aa11.25□□□□□ -0.61
SFR1-202ENST00000369729 DDX58O95786 925 aaKnown RBP11.25□□□□□ -0.61
SFR1-202ENST00000369729 PDE3AQ14432 1141 aa11.25□□□□□ -0.61
SFR1-202ENST00000369729 ERICH6BQ5W0A0 696 aa11.25□□□□□ -0.61
SFR1-202ENST00000369729 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
SFR1-202ENST00000369729 MRPL50Q8N5N7 158 aaKnown RBP11.25□□□□□ -0.61
SFR1-202ENST00000369729 ITGB4P16144 1822 aa11.24□□□□□ -0.61
SFR1-202ENST00000369729 KCNQ2O43526 872 aa11.24□□□□□ -0.61
SFR1-202ENST00000369729 ATF7IPQ6VMQ6 1270 aa11.24□□□□□ -0.61
SFR1-202ENST00000369729 NECTIN2Q92692 538 aa11.24□□□□□ -0.61
SFR1-202ENST00000369729 DDX21Q9NR30 783 aaKnown RBP eCLIP11.24□□□□□ -0.61
SFR1-202ENST00000369729 NOB1Q9ULX3 412 aaKnown RBP11.24□□□□□ -0.61
SFR1-202ENST00000369729 RGS12O14924 1447 aa11.24□□□□□ -0.61
SFR1-202ENST00000369729 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
SFR1-202ENST00000369729 LOC102724428A0A0B4J2F2 783 aa11.23□□□□□ -0.61
SFR1-202ENST00000369729 ATP6V1AP38606 617 aa11.23□□□□□ -0.61
SFR1-202ENST00000369729 SIK1P57059 783 aa11.23□□□□□ -0.61
SFR1-202ENST00000369729 FAM182BQ5T319 152 aa11.23□□□□□ -0.61
SFR1-202ENST00000369729 DZIP1LQ8IYY4 767 aaKnown RBP11.23□□□□□ -0.61
SFR1-202ENST00000369729 NHSQ6T4R5 1651 aa11.23□□□□□ -0.61
SFR1-202ENST00000369729 TCERG1O14776 1098 aaKnown RBP11.22□□□□□ -0.61
SFR1-202ENST00000369729 CHPF2Q9P2E5 772 aa11.22□□□□□ -0.61
SFR1-202ENST00000369729 KCPQ6ZWJ8 1503 aa11.22□□□□□ -0.61
SFR1-202ENST00000369729 PLIN1O60240 522 aa11.21□□□□□ -0.61
SFR1-202ENST00000369729 FLIIQ13045 1269 aa11.21□□□□□ -0.61
SFR1-202ENST00000369729 SF3B2Q13435 895 aaKnown RBP11.21□□□□□ -0.61
SFR1-202ENST00000369729 FKBP5Q13451 457 aaPredicted RBP11.21□□□□□ -0.61
SFR1-202ENST00000369729 AAMPQ13685 434 aa11.21□□□□□ -0.61
SFR1-202ENST00000369729 USP16Q9Y5T5 823 aa11.21□□□□□ -0.61
SFR1-202ENST00000369729 UBR2Q8IWV8 1755 aa11.21□□□□□ -0.62
SFR1-202ENST00000369729 TRIM37O94972 964 aa11.2□□□□□ -0.62
SFR1-202ENST00000369729 FKBP8Q14318 412 aa11.2□□□□□ -0.62
SFR1-202ENST00000369729 SLC27A3Q5K4L6 730 aa11.2□□□□□ -0.62
SFR1-202ENST00000369729 DNAJC10Q8IXB1 793 aa11.2□□□□□ -0.62
SFR1-202ENST00000369729 CCNL1Q9UK58 526 aaPredicted RBP11.19□□□□□ -0.62
SFR1-202ENST00000369729 CACNA1FO60840 1977 aa11.19□□□□□ -0.62
SFR1-202ENST00000369729 BRWD3Q6RI45 1802 aa11.19□□□□□ -0.62
SFR1-202ENST00000369729 PRAMEF22A3QJZ6 481 aa11.19□□□□□ -0.62
SFR1-202ENST00000369729 CYP19A1P11511 503 aaPredicted RBP11.19□□□□□ -0.62
SFR1-202ENST00000369729 TRIM27P14373 513 aa11.19□□□□□ -0.62
SFR1-202ENST00000369729 MYL6BP14649 208 aa11.19□□□□□ -0.62
SFR1-202ENST00000369729 CCT4P50991 539 aaKnown RBP11.19□□□□□ -0.62
SFR1-202ENST00000369729 DDX19BQ9UMR2 479 aa11.19□□□□□ -0.62
SFR1-202ENST00000369729 LAMB4A4D0S4 1761 aa11.18□□□□□ -0.62
SFR1-202ENST00000369729 A0A087WZG4 1122 aa11.18□□□□□ -0.62
SFR1-202ENST00000369729 PLSCR1O15162 318 aa11.18□□□□□ -0.62
SFR1-202ENST00000369729 APBA3O96018 575 aa11.18□□□□□ -0.62
SFR1-202ENST00000369729 NEXNQ0ZGT2 675 aa11.18□□□□□ -0.62
SFR1-202ENST00000369729 KIF6Q6ZMV9 814 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms