RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 FRMPD1Q5SYB0 1578 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 KRT32Q14532 448 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 SF3A1Q15459 793 aaKnown RBP6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 CEP85Q6P2H3 762 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 ANKRD13DQ6ZTN6 518 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 LINS1Q8NG48 757 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 ARID3AQ99856 593 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 NOL10Q9BSC4 688 aaKnown RBP6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 NUTM2BA6NNL0 878 aaPredicted RBP6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 NUTM2EB1AL46 878 aaPredicted RBP6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 G3V3G9 751 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 KRT24Q2M2I5 525 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 TTC39AQ5SRH9 613 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 DCAF8Q5TAQ9 597 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 ZSCAN25Q6NSZ9 544 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 NUTM2AQ8IVF1 878 aaPredicted RBP6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 AMOTL1Q8IY63 956 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 ECHDC1Q9NTX5 307 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 AKAP2Q9Y2D5 859 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 IGSF1Q8N6C5 1336 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 A0A087WZG4 1122 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 MBD3O95983 291 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 HSPA2P54652 639 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 ZSCAN31Q96LW9 406 aaPredicted RBP6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 ADGRB1O14514 1584 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 TRAK2O60296 914 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 PNPLA6Q8IY17 1366 aa6.37□□□□□ -1.39
SMNDC1-202ENST00000369603 VPS37CA5D8V6 355 aaPredicted RBP6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 IL2RBP14784 551 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 TPM4P67936 248 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 AKAP17AQ02040 695 aaKnown RBP6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 KIAA2012Q0VF49 1180 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 MCTP1Q6DN14 999 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 CWC27Q6UX04 472 aaKnown RBP6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 PHF23Q9BUL5 403 aaPredicted RBP6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 ISY1Q9ULR0 285 aaKnown RBP6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 ABCC4O15439 1325 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 GRM8O00222 908 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 TRIM29Q14134 588 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 DRC7Q8IY82 874 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 RHPN1Q8TCX5 695 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 TBC1D2Q9BYX2 928 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 DDX21Q9NR30 783 aaKnown RBP eCLIP6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 GNL3LQ9NVN8 582 aaKnown RBP6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 CWC25Q9NXE8 425 aaPredicted RBP6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 ZNF652Q9Y2D9 606 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 PPLO60437 1756 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 MROH1Q8NDA8 1641 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 PCDH11XQ9BZA7 1347 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 PCDH11YQ9BZA8 1340 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 SPATA31D1Q6ZQQ2 1576 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 ERICH2A1L162 156 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 PDE1AP54750 535 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 NBPF6Q5VWK0 638 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 EVI5LQ96CN4 794 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 NBPF4Q96M43 638 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 MPHOSPH8Q99549 860 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 CTNNA3Q9UI47 895 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 WDR33Q9C0J8 1336 aaKnown RBP6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 BLOC1S2Q6QNY1 142 aa6.36□□□□□ -1.39
SMNDC1-202ENST00000369603 DHX16O60231 1041 aaKnown RBP6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 MAP4K4O95819 1239 aaPredicted RBP6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 ZNF853P0CG23 659 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 CABLES1Q8TDN4 633 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 XAGE3Q8WTP9 111 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 CPSF1Q10570 1443 aaKnown RBP6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 ANXA1P04083 346 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 MCM4P33991 863 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 CHAF1AQ13111 956 aaPredicted RBP6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 COPS6Q7L5N1 327 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 NFATC2IPQ8NCF5 419 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 PTCH1Q13635 1447 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 SDSP20132 328 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 MRE11P49959 708 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 IFIT5Q13325 482 aaKnown RBP6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 PKNOX2Q96KN3 472 aa6.35□□□□□ -1.39
SMNDC1-202ENST00000369603 PIP4K2BP78356 416 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 SLC39A6Q13433 755 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 SART3Q15020 963 aaKnown RBP6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 FOXD4L6Q3SYB3 417 aaPredicted RBP6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 FOXD4L3Q6VB84 417 aaPredicted RBP6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 NFXL1Q6ZNB6 911 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 UBE3BQ7Z3V4 1068 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 UBE2Q2Q8WVN8 375 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 ZNF790Q6PG37 636 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 PDRG1Q9NUG6 133 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 TECPR2O15040 1411 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 TTC41PQ6P2S7 1318 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 TMEM131LA2VDJ0 1609 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 MROH2AA6NES4 1674 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 TMEM94Q12767 1356 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 USP31Q70CQ4 1352 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 REREQ9P2R6 1566 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 FAM177BA6PVY3 158 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 TOM1O60784 492 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 ANAPC15P60006 121 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 G2E3Q7L622 706 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 ARHGEF25Q86VW2 580 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 PLEKHM2Q8IWE5 1019 aa6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 SNX21Q969T3 373 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms