RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
HMGCS2-201ENST00000369406 LRP10Q7Z4F1 713 aa17.82■□□□□ 0.44
HMGCS2-201ENST00000369406 FMNL2Q96PY5 1086 aa17.82■□□□□ 0.44
HMGCS2-201ENST00000369406 DBF4Q9UBU7 674 aaPredicted RBP17.82■□□□□ 0.44
HMGCS2-201ENST00000369406 CCDC9Q9Y3X0 531 aaKnown RBP17.82■□□□□ 0.44
HMGCS2-201ENST00000369406 EXOC5O00471 708 aa17.81■□□□□ 0.44
HMGCS2-201ENST00000369406 ASAP1Q9ULH1 1129 aa17.81■□□□□ 0.44
HMGCS2-201ENST00000369406 SPATA31A6Q5VVP1 1343 aa17.81■□□□□ 0.44
HMGCS2-201ENST00000369406 PI4KAP2A4QPH2 592 aa17.81■□□□□ 0.44
HMGCS2-201ENST00000369406 PI4KAP1Q8N8J0 262 aa17.81■□□□□ 0.44
HMGCS2-201ENST00000369406 RWDD1Q9H446 243 aaPredicted RBP17.81■□□□□ 0.44
HMGCS2-201ENST00000369406 PTCD1O75127 700 aaKnown RBP17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 SNRPA1P09661 255 aaKnown RBP17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 RGS3P49796 1198 aa17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 FNBP4Q8N3X1 1017 aaPredicted RBP17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 MARCH10Q8NA82 808 aaPredicted RBP17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 ARFGEF2Q9Y6D5 1785 aa17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 TMOD3Q9NYL9 352 aa17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 THRAP3Q9Y2W1 955 aaKnown RBP17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 BCL9O00512 1426 aa17.8■□□□□ 0.44
HMGCS2-201ENST00000369406 MYL6BP14649 208 aa17.79■□□□□ 0.44
HMGCS2-201ENST00000369406 CCT4P50991 539 aaKnown RBP17.79■□□□□ 0.44
HMGCS2-201ENST00000369406 DDX21Q9NR30 783 aaKnown RBP eCLIP17.79■□□□□ 0.44
HMGCS2-201ENST00000369406 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
HMGCS2-201ENST00000369406 DDB1Q16531 1140 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 BARGINQ6ZT62 677 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 ATG3Q9NT62 314 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 TJP1Q07157 1748 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 THSD7AQ9UPZ6 1657 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 VPS72Q15906 364 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 NBPF14Q5TI25 921 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 NUP188Q5SRE5 1749 aa17.78■□□□□ 0.44
HMGCS2-201ENST00000369406 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
HMGCS2-201ENST00000369406 SMC5Q8IY18 1101 aa17.77■□□□□ 0.44
HMGCS2-201ENST00000369406 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.43
HMGCS2-201ENST00000369406 BEND3Q5T5X7 828 aa17.77■□□□□ 0.43
HMGCS2-201ENST00000369406 DNAAF4Q8WXU2 420 aa17.77■□□□□ 0.43
HMGCS2-201ENST00000369406 SLC4A9Q96Q91 983 aa17.77■□□□□ 0.43
HMGCS2-201ENST00000369406 EP400Q96L91 3159 aa17.77■□□□□ 0.43
HMGCS2-201ENST00000369406 CEP85Q6P2H3 762 aa17.76■□□□□ 0.43
HMGCS2-201ENST00000369406 USP44Q9H0E7 712 aa17.76■□□□□ 0.43
HMGCS2-201ENST00000369406 MAP3K2Q9Y2U5 619 aa17.76■□□□□ 0.43
HMGCS2-201ENST00000369406 PRIM1P49642 420 aaKnown RBP17.76■□□□□ 0.43
HMGCS2-201ENST00000369406 XAGE3Q8WTP9 111 aa17.76■□□□□ 0.43
HMGCS2-201ENST00000369406 CDCA7Q9BWT1 371 aaPredicted RBP17.76■□□□□ 0.43
HMGCS2-201ENST00000369406 HYPKQ9NX55 129 aa17.76■□□□□ 0.43
HMGCS2-201ENST00000369406 USP21Q9UK80 565 aa17.76■□□□□ 0.43
HMGCS2-201ENST00000369406 PDE4AP27815 886 aa17.75■□□□□ 0.43
HMGCS2-201ENST00000369406 ACSBG1Q96GR2 724 aa17.74■□□□□ 0.43
HMGCS2-201ENST00000369406 A1BGP04217 495 aa17.74■□□□□ 0.43
HMGCS2-201ENST00000369406 COPS6Q7L5N1 327 aa17.74■□□□□ 0.43
HMGCS2-201ENST00000369406 ANKRD44Q8N8A2 993 aa17.74■□□□□ 0.43
HMGCS2-201ENST00000369406 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
HMGCS2-201ENST00000369406 KSR2Q6VAB6 950 aa17.73■□□□□ 0.43
HMGCS2-201ENST00000369406 RBM19Q9Y4C8 960 aaKnown RBP17.73■□□□□ 0.43
HMGCS2-201ENST00000369406 CWF19L2Q2TBE0 894 aaKnown RBP17.73■□□□□ 0.43
HMGCS2-201ENST00000369406 SRCIN1Q9C0H9 1055 aa17.72■□□□□ 0.43
HMGCS2-201ENST00000369406 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
HMGCS2-201ENST00000369406 NBPF7P0C2Y1 421 aaPredicted RBP17.72■□□□□ 0.43
HMGCS2-201ENST00000369406 DNAJC10Q8IXB1 793 aa17.72■□□□□ 0.43
HMGCS2-201ENST00000369406 AFF2P51816 1311 aa17.72■□□□□ 0.43
HMGCS2-201ENST00000369406 CHMP4AQ9BY43 222 aa17.71■□□□□ 0.43
HMGCS2-201ENST00000369406 LRRFIP2Q9Y608 721 aaKnown RBP17.71■□□□□ 0.43
HMGCS2-201ENST00000369406 KCNQ2O43526 872 aa17.71■□□□□ 0.43
HMGCS2-201ENST00000369406 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
HMGCS2-201ENST00000369406 MEX3CQ5U5Q3 659 aaKnown RBP17.7■□□□□ 0.42
HMGCS2-201ENST00000369406 PTF1AQ7RTS3 328 aa17.7■□□□□ 0.42
HMGCS2-201ENST00000369406 NUCB1Q02818 461 aa17.7■□□□□ 0.42
HMGCS2-201ENST00000369406 RBM42Q9BTD8 480 aaKnown RBP17.7■□□□□ 0.42
HMGCS2-201ENST00000369406 PNMA6EA0A0J9YXQ4 647 aa17.69■□□□□ 0.42
HMGCS2-201ENST00000369406 TTLL7Q6ZT98 887 aa17.69■□□□□ 0.42
HMGCS2-201ENST00000369406 MYH14Q7Z406 1995 aaKnown RBP17.69■□□□□ 0.42
HMGCS2-201ENST00000369406 GNAI2P04899 355 aa17.69■□□□□ 0.42
HMGCS2-201ENST00000369406 FAM182BQ5T319 152 aa17.69■□□□□ 0.42
HMGCS2-201ENST00000369406 SBF2Q86WG5 1849 aa17.69■□□□□ 0.42
HMGCS2-201ENST00000369406 ATRNO75882 1429 aa17.68■□□□□ 0.42
HMGCS2-201ENST00000369406 A0A0G2JS52 829 aa17.68■□□□□ 0.42
HMGCS2-201ENST00000369406 LNPKQ9C0E8 428 aa17.68■□□□□ 0.42
HMGCS2-201ENST00000369406 RPAP2Q8IXW5 612 aaPredicted RBP17.68■□□□□ 0.42
HMGCS2-201ENST00000369406 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
HMGCS2-201ENST00000369406 BTAF1O14981 1849 aa17.67■□□□□ 0.42
HMGCS2-201ENST00000369406 GNAI3P08754 354 aa17.67■□□□□ 0.42
HMGCS2-201ENST00000369406 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
HMGCS2-201ENST00000369406 BACH2Q9BYV9 841 aa17.67■□□□□ 0.42
HMGCS2-201ENST00000369406 BRWD3Q6RI45 1802 aa17.66■□□□□ 0.42
HMGCS2-201ENST00000369406 UBTFL1P0CB47 393 aaPredicted RBP17.66■□□□□ 0.42
HMGCS2-201ENST00000369406 C8orf34Q49A92 452 aa17.66■□□□□ 0.42
HMGCS2-201ENST00000369406 ANKRD13DQ6ZTN6 518 aa17.66■□□□□ 0.42
HMGCS2-201ENST00000369406 ANKRD45Q5TZF3 282 aa17.66■□□□□ 0.42
HMGCS2-201ENST00000369406 CHD1LQ86WJ1 897 aa17.66■□□□□ 0.42
HMGCS2-201ENST00000369406 MYD88Q99836 296 aa17.66■□□□□ 0.42
HMGCS2-201ENST00000369406 ERBB4Q15303 1308 aa17.65■□□□□ 0.42
HMGCS2-201ENST00000369406 COL5A3P25940 1745 aaPredicted RBP17.65■□□□□ 0.42
HMGCS2-201ENST00000369406 LINS1Q8NG48 757 aa17.65■□□□□ 0.42
HMGCS2-201ENST00000369406 GCC1Q96CN9 775 aa17.65■□□□□ 0.42
HMGCS2-201ENST00000369406 GJD4Q96KN9 370 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms