RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 N4BP2Q86UW6 1770 aaPredicted RBP30.32■■■□□ 2.44
SNX3-203ENST00000368979 INTS3Q68E01 1043 aaKnown RBP30.32■■■□□ 2.44
SNX3-203ENST00000368979 PHAXQ9H814 394 aaKnown RBP30.31■■■□□ 2.44
SNX3-203ENST00000368979 PXDNLA1KZ92 1463 aa30.3■■■□□ 2.44
SNX3-203ENST00000368979 FKBP5Q13451 457 aaPredicted RBP30.29■■■□□ 2.44
SNX3-203ENST00000368979 ATG3Q9NT62 314 aa30.29■■■□□ 2.44
SNX3-203ENST00000368979 USP16Q9Y5T5 823 aa30.29■■■□□ 2.44
SNX3-203ENST00000368979 PRIM1P49642 420 aaKnown RBP30.28■■■□□ 2.44
SNX3-203ENST00000368979 PDIA6Q15084 440 aa30.28■■■□□ 2.44
SNX3-203ENST00000368979 DDX21Q9NR30 783 aaKnown RBP eCLIP30.28■■■□□ 2.44
SNX3-203ENST00000368979 ASAP1Q9ULH1 1129 aa30.28■■■□□ 2.44
SNX3-203ENST00000368979 ONECUT3O60422 494 aaPredicted RBP30.27■■■□□ 2.44
SNX3-203ENST00000368979 PROSER3Q2NL68 480 aa30.27■■■□□ 2.44
SNX3-203ENST00000368979 ANXA1P04083 346 aa30.27■■■□□ 2.44
SNX3-203ENST00000368979 ZBTB40Q9NUA8 1239 aa30.27■■■□□ 2.44
SNX3-203ENST00000368979 F6X3S4 739 aa30.26■■■□□ 2.43
SNX3-203ENST00000368979 ZBTB7BO15156 539 aaPredicted RBP30.26■■■□□ 2.43
SNX3-203ENST00000368979 CHMP4BQ9H444 224 aaKnown RBP30.26■■■□□ 2.43
SNX3-203ENST00000368979 HYPKQ9NX55 129 aa30.26■■■□□ 2.43
SNX3-203ENST00000368979 A0A0G2JS52 829 aa30.25■■■□□ 2.43
SNX3-203ENST00000368979 PTCD1O75127 700 aaKnown RBP30.25■■■□□ 2.43
SNX3-203ENST00000368979 MYT1Q01538 1121 aa30.25■■■□□ 2.43
SNX3-203ENST00000368979 SYTL4Q96C24 671 aaPredicted RBP30.25■■■□□ 2.43
SNX3-203ENST00000368979 KDM2BQ8NHM5 1336 aa30.24■■■□□ 2.43
SNX3-203ENST00000368979 VSIG10Q8N0Z9 540 aa30.24■■■□□ 2.43
SNX3-203ENST00000368979 QTRT2Q9H974 415 aaKnown RBP30.24■■■□□ 2.43
SNX3-203ENST00000368979 ERBB4Q15303 1308 aa30.23■■■□□ 2.43
SNX3-203ENST00000368979 PCDHB15Q9Y5E8 787 aa30.23■■■□□ 2.43
SNX3-203ENST00000368979 CCT4P50991 539 aaKnown RBP30.22■■■□□ 2.43
SNX3-203ENST00000368979 ACSBG1Q96GR2 724 aa30.22■■■□□ 2.43
SNX3-203ENST00000368979 LRP10Q7Z4F1 713 aa30.21■■■□□ 2.43
SNX3-203ENST00000368979 SLC4A10Q6U841 1118 aa30.2■■■□□ 2.42
SNX3-203ENST00000368979 ADCY9O60503 1353 aa30.2■■■□□ 2.42
SNX3-203ENST00000368979 TJP1Q07157 1748 aa30.19■■■□□ 2.42
SNX3-203ENST00000368979 CICQ96RK0 1608 aaPredicted RBP30.18■■■□□ 2.42
SNX3-203ENST00000368979 CENPQQ7L2Z9 268 aaPredicted RBP30.18■■■□□ 2.42
SNX3-203ENST00000368979 NHSQ6T4R5 1651 aa30.18■■■□□ 2.42
SNX3-203ENST00000368979 SEPT12Q8IYM1 358 aa30.17■■■□□ 2.42
SNX3-203ENST00000368979 TEX13AQ9BXU3 409 aaPredicted RBP30.17■■■□□ 2.42
SNX3-203ENST00000368979 ATP10DQ9P241 1426 aa30.16■■■□□ 2.42
SNX3-203ENST00000368979 PI4KAP2A4QPH2 592 aa30.16■■■□□ 2.42
SNX3-203ENST00000368979 MYL6BP14649 208 aa30.16■■■□□ 2.42
SNX3-203ENST00000368979 PI4KAP1Q8N8J0 262 aa30.16■■■□□ 2.42
SNX3-203ENST00000368979 DNAAF4Q8WXU2 420 aa30.16■■■□□ 2.42
SNX3-203ENST00000368979 RBM42Q9BTD8 480 aaKnown RBP30.16■■■□□ 2.42
SNX3-203ENST00000368979 IGHDP01880 384 aa30.15■■■□□ 2.42
SNX3-203ENST00000368979 SLC4A9Q96Q91 983 aa30.15■■■□□ 2.42
SNX3-203ENST00000368979 ZNF772Q68DY9 489 aaPredicted RBP30.14■■■□□ 2.42
SNX3-203ENST00000368979 KSR2Q6VAB6 950 aa30.14■■■□□ 2.42
SNX3-203ENST00000368979 KAT6BQ8WYB5 2073 aa30.14■■■□□ 2.41
SNX3-203ENST00000368979 NBPF26B4DH59 902 aa30.13■■■□□ 2.41
SNX3-203ENST00000368979 KCNQ2O43526 872 aa30.13■■■□□ 2.41
SNX3-203ENST00000368979 NBPF14Q5TI25 921 aa30.13■■■□□ 2.41
SNX3-203ENST00000368979 NBPF10Q6P3W6 841 aaKnown RBP30.13■■■□□ 2.41
SNX3-203ENST00000368979 DNAJC10Q8IXB1 793 aa30.13■■■□□ 2.41
SNX3-203ENST00000368979 NBPF15Q8N660 670 aa30.13■■■□□ 2.41
SNX3-203ENST00000368979 DDX58O95786 925 aaKnown RBP30.12■■■□□ 2.41
SNX3-203ENST00000368979 PIP4K2AP48426 406 aaPredicted RBP30.12■■■□□ 2.41
SNX3-203ENST00000368979 XAGE3Q8WTP9 111 aa30.12■■■□□ 2.41
SNX3-203ENST00000368979 A1BGP04217 495 aa30.11■■■□□ 2.41
SNX3-203ENST00000368979 COPS6Q7L5N1 327 aa30.11■■■□□ 2.41
SNX3-203ENST00000368979 MEIS3Q99687 375 aa30.11■■■□□ 2.41
SNX3-203ENST00000368979 MAP3K2Q9Y2U5 619 aa30.11■■■□□ 2.41
SNX3-203ENST00000368979 ZNF831Q5JPB2 1677 aa30.1■■■□□ 2.41
SNX3-203ENST00000368979 AIMP1Q12904 312 aaKnown RBP30.1■■■□□ 2.41
SNX3-203ENST00000368979 BEND3Q5T5X7 828 aa30.1■■■□□ 2.41
SNX3-203ENST00000368979 PELP1Q8IZL8 1130 aaKnown RBP30.1■■■□□ 2.41
SNX3-203ENST00000368979 RGS17Q9UGC6 210 aaPredicted RBP30.1■■■□□ 2.41
SNX3-203ENST00000368979 PALLDQ8WX93 1383 aa30.1■■■□□ 2.41
SNX3-203ENST00000368979 SBF2Q86WG5 1849 aa30.09■■■□□ 2.41
SNX3-203ENST00000368979 HDAC1Q13547 482 aaPredicted RBP30.09■■■□□ 2.41
SNX3-203ENST00000368979 SMARCC1Q92922 1105 aaPredicted RBP30.09■■■□□ 2.41
SNX3-203ENST00000368979 RWDD1Q9H446 243 aaPredicted RBP30.09■■■□□ 2.41
SNX3-203ENST00000368979 STARD3NLO95772 234 aa30.08■■■□□ 2.41
SNX3-203ENST00000368979 SRCIN1Q9C0H9 1055 aa30.08■■■□□ 2.41
SNX3-203ENST00000368979 C1orf115Q9H7X2 142 aa30.08■■■□□ 2.41
SNX3-203ENST00000368979 ARFGEF2Q9Y6D5 1785 aa30.08■■■□□ 2.41
SNX3-203ENST00000368979 BTAF1O14981 1849 aa30.08■■■□□ 2.41
SNX3-203ENST00000368979 BRWD3Q6RI45 1802 aa30.08■■■□□ 2.41
SNX3-203ENST00000368979 CYP19A1P11511 503 aaPredicted RBP30.06■■■□□ 2.4
SNX3-203ENST00000368979 NUP188Q5SRE5 1749 aa30.06■■■□□ 2.4
SNX3-203ENST00000368979 RBM6P78332 1123 aaKnown RBP30.06■■■□□ 2.4
SNX3-203ENST00000368979 FAM182BQ5T319 152 aa30.06■■■□□ 2.4
SNX3-203ENST00000368979 RREB1Q92766 1687 aa30.04■■■□□ 2.4
SNX3-203ENST00000368979 LOC102724428A0A0B4J2F2 783 aa30.04■■■□□ 2.4
SNX3-203ENST00000368979 SIK1P57059 783 aa30.04■■■□□ 2.4
SNX3-203ENST00000368979 ANKRD13DQ6ZTN6 518 aa30.04■■■□□ 2.4
SNX3-203ENST00000368979 RIC3Q7Z5B4 369 aa30.04■■■□□ 2.4
SNX3-203ENST00000368979 IBTKQ9P2D0 1353 aaPredicted RBP30.03■■■□□ 2.4
SNX3-203ENST00000368979 ALDH1L1O75891 902 aa30.03■■■□□ 2.4
SNX3-203ENST00000368979 GNAI3P08754 354 aa30.03■■■□□ 2.4
SNX3-203ENST00000368979 USP44Q9H0E7 712 aa30.02■■■□□ 2.4
SNX3-203ENST00000368979 PTF1AQ7RTS3 328 aa30.01■■■□□ 2.4
SNX3-203ENST00000368979 LINS1Q8NG48 757 aa30.01■■■□□ 2.4
SNX3-203ENST00000368979 PLBD2Q8NHP8 589 aa30.01■■■□□ 2.4
SNX3-203ENST00000368979 COL5A3P25940 1745 aaPredicted RBP30.01■■■□□ 2.4
SNX3-203ENST00000368979 METTL22Q9BUU2 404 aaPredicted RBP30.01■■■□□ 2.39
SNX3-203ENST00000368979 ATP6V1AP38606 617 aa30■■■□□ 2.39
SNX3-203ENST00000368979 SIRT2Q8IXJ6 389 aa30■■■□□ 2.39
SNX3-203ENST00000368979 GNAI2P04899 355 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms