RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 PTPRCP08575 1304 aa17.62■□□□□ 0.41
SEMA6C-204ENST00000368914 DDX21Q9NR30 783 aaKnown RBP eCLIP17.62■□□□□ 0.41
SEMA6C-204ENST00000368914 KDRP35968 1356 aa17.61■□□□□ 0.41
SEMA6C-204ENST00000368914 KIF24Q5T7B8 1368 aa17.61■□□□□ 0.41
SEMA6C-204ENST00000368914 KSR2Q6VAB6 950 aa17.61■□□□□ 0.41
SEMA6C-204ENST00000368914 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
SEMA6C-204ENST00000368914 CHD1LQ86WJ1 897 aa17.61■□□□□ 0.41
SEMA6C-204ENST00000368914 USP32Q8NFA0 1604 aa17.6■□□□□ 0.41
SEMA6C-204ENST00000368914 KIF20BQ96Q89 1820 aa17.6■□□□□ 0.41
SEMA6C-204ENST00000368914 KCNJ4P48050 445 aa17.6■□□□□ 0.41
SEMA6C-204ENST00000368914 NOL8Q76FK4 1167 aaKnown RBP17.6■□□□□ 0.41
SEMA6C-204ENST00000368914 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
SEMA6C-204ENST00000368914 IFIT2P09913 472 aaKnown RBP17.6■□□□□ 0.41
SEMA6C-204ENST00000368914 TRMT112Q9UI30 125 aaKnown RBP17.6■□□□□ 0.41
SEMA6C-204ENST00000368914 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
SEMA6C-204ENST00000368914 DCCP43146 1447 aa17.59■□□□□ 0.41
SEMA6C-204ENST00000368914 PNMA6EA0A0J9YXQ4 647 aa17.58■□□□□ 0.4
SEMA6C-204ENST00000368914 TRIM37O94972 964 aa17.58■□□□□ 0.4
SEMA6C-204ENST00000368914 SEPT12Q8IYM1 358 aa17.58■□□□□ 0.4
SEMA6C-204ENST00000368914 OTUD7AQ8TE49 926 aaPredicted RBP17.58■□□□□ 0.4
SEMA6C-204ENST00000368914 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.4
SEMA6C-204ENST00000368914 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
SEMA6C-204ENST00000368914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.57■□□□□ 0.41e-6■■■□□ 16.7
SEMA6C-204ENST00000368914 ZBTB1Q9Y2K1 713 aa17.57■□□□□ 0.4
SEMA6C-204ENST00000368914 MEGF6O75095 1541 aa17.57■□□□□ 0.4
SEMA6C-204ENST00000368914 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
SEMA6C-204ENST00000368914 TPRNQ4KMQ1 711 aa17.56■□□□□ 0.4
SEMA6C-204ENST00000368914 ERVV-2B6SEH9 535 aa17.56■□□□□ 0.4
SEMA6C-204ENST00000368914 CASC1Q6TDU7 716 aa17.56■□□□□ 0.4
SEMA6C-204ENST00000368914 DZIP3Q86Y13 1208 aaKnown RBP17.56■□□□□ 0.4
SEMA6C-204ENST00000368914 MARCH10Q8NA82 808 aaPredicted RBP17.56■□□□□ 0.4
SEMA6C-204ENST00000368914 PXDNQ92626 1479 aa17.56■□□□□ 0.4
SEMA6C-204ENST00000368914 RPAP2Q8IXW5 612 aaPredicted RBP17.56■□□□□ 0.4
SEMA6C-204ENST00000368914 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 FRAT2O75474 233 aaPredicted RBP17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 HDAC5Q9UQL6 1122 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 FMN2Q9NZ56 1722 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 GRM8O00222 908 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 USP44Q9H0E7 712 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 CRB1P82279 1406 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 GNPATO15228 680 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 CEP85Q6P2H3 762 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 LRRCC1Q9C099 1032 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 PIK3C2AO00443 1686 aa17.55■□□□□ 0.4
SEMA6C-204ENST00000368914 PTF1AQ7RTS3 328 aa17.54■□□□□ 0.4
SEMA6C-204ENST00000368914 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
SEMA6C-204ENST00000368914 ATG3Q9NT62 314 aa17.54■□□□□ 0.4
SEMA6C-204ENST00000368914 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SEMA6C-204ENST00000368914 ADGRB2O60241 1585 aa17.54■□□□□ 0.4
SEMA6C-204ENST00000368914 AACSQ86V21 672 aa17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 BCL11BQ9C0K0 894 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 IQSEC2Q5JU85 1478 aa17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 LOC102724428A0A0B4J2F2 783 aa17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 SIK1P57059 783 aa17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 DNAJC2Q99543 621 aaKnown RBP17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 JCADQ9P266 1359 aa17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 ZPR1O75312 459 aa17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 TRPC5Q9UL62 973 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-204ENST00000368914 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.4
SEMA6C-204ENST00000368914 LINS1Q8NG48 757 aa17.52■□□□□ 0.4
SEMA6C-204ENST00000368914 GCC1Q96CN9 775 aa17.52■□□□□ 0.4
SEMA6C-204ENST00000368914 SLKQ9H2G2 1235 aaPredicted RBP17.52■□□□□ 0.4
SEMA6C-204ENST00000368914 BICC1Q9H694 974 aaKnown RBP17.52■□□□□ 0.4
SEMA6C-204ENST00000368914 CNNM1Q9NRU3 951 aa17.52■□□□□ 0.4
SEMA6C-204ENST00000368914 ZNF142P52746 1687 aaPredicted RBP17.52■□□□□ 0.4
SEMA6C-204ENST00000368914 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.4
SEMA6C-204ENST00000368914 SYNE4Q8N205 404 aa17.52■□□□□ 0.39
SEMA6C-204ENST00000368914 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.39
SEMA6C-204ENST00000368914 NIP7Q9Y221 180 aaKnown RBP eCLIP17.52■□□□□ 0.39
SEMA6C-204ENST00000368914 ZNF594Q96JF6 807 aaPredicted RBP17.51■□□□□ 0.39
SEMA6C-204ENST00000368914 AK7Q96M32 723 aa17.51■□□□□ 0.39
SEMA6C-204ENST00000368914 SPATA31A1Q5TZJ5 1347 aa17.51■□□□□ 0.39
SEMA6C-204ENST00000368914 HELBQ8NG08 1087 aaPredicted RBP17.5■□□□□ 0.39
SEMA6C-204ENST00000368914 GJD4Q96KN9 370 aaPredicted RBP17.5■□□□□ 0.39
SEMA6C-204ENST00000368914 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
SEMA6C-204ENST00000368914 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
SEMA6C-204ENST00000368914 SUCLG2Q96I99 432 aa17.5■□□□□ 0.39
SEMA6C-204ENST00000368914 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
SEMA6C-204ENST00000368914 CAMTA1Q9Y6Y1 1673 aa17.5■□□□□ 0.39
SEMA6C-204ENST00000368914 NAP1L2Q9ULW6 460 aaPredicted RBP17.49■□□□□ 0.39
SEMA6C-204ENST00000368914 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
SEMA6C-204ENST00000368914 NBPF14Q5TI25 921 aa17.49■□□□□ 0.39
SEMA6C-204ENST00000368914 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
SEMA6C-204ENST00000368914 NBPF15Q8N660 670 aa17.49■□□□□ 0.39
SEMA6C-204ENST00000368914 CDCA7Q9BWT1 371 aaPredicted RBP17.49■□□□□ 0.39
SEMA6C-204ENST00000368914 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
SEMA6C-204ENST00000368914 BOLA2Q9H3K6 86 aa17.49■□□□□ 0.39
SEMA6C-204ENST00000368914 ABCC4O15439 1325 aa17.49■□□□□ 0.39
SEMA6C-204ENST00000368914 RFC4P35249 363 aa17.48■□□□□ 0.39
SEMA6C-204ENST00000368914 SIRT2Q8IXJ6 389 aa17.48■□□□□ 0.39
SEMA6C-204ENST00000368914 ANO2Q9NQ90 1003 aa17.48■□□□□ 0.39
SEMA6C-204ENST00000368914 MON2Q7Z3U7 1717 aa17.48■□□□□ 0.39
SEMA6C-204ENST00000368914 BEND3Q5T5X7 828 aa17.48■□□□□ 0.39
SEMA6C-204ENST00000368914 CPDO75976 1380 aa17.48■□□□□ 0.39
SEMA6C-204ENST00000368914 BACH2Q9BYV9 841 aa17.47■□□□□ 0.39
SEMA6C-204ENST00000368914 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
SEMA6C-204ENST00000368914 APBA3O96018 575 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms