RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 TAF1DQ9H5J8 278 aaPredicted RBP14.87□□□□□ -0.03
TUBE1-201ENST00000368657 SMG6Q86US8 1419 aaKnown RBP14.86□□□□□ -0.03
TUBE1-201ENST00000368657 DDR1Q08345 913 aa14.86□□□□□ -0.03
TUBE1-201ENST00000368657 HDGFL2Q7Z4V5 671 aaPredicted RBP14.86□□□□□ -0.03
TUBE1-201ENST00000368657 CLEC11AQ9Y240 323 aa14.86□□□□□ -0.03
TUBE1-201ENST00000368657 MON2Q7Z3U7 1717 aa14.86□□□□□ -0.03
TUBE1-201ENST00000368657 RGPD2P0DJD1 1756 aa14.85□□□□□ -0.03
TUBE1-201ENST00000368657 TM4SF1P30408 202 aa14.85□□□□□ -0.03
TUBE1-201ENST00000368657 CNTROBQ8N137 903 aa14.85□□□□□ -0.03
TUBE1-201ENST00000368657 USHBP1Q8N6Y0 703 aa14.85□□□□□ -0.03
TUBE1-201ENST00000368657 L3MBTL3Q96JM7 780 aaPredicted RBP14.85□□□□□ -0.03
TUBE1-201ENST00000368657 CNTNAP4Q9C0A0 1308 aa14.85□□□□□ -0.03
TUBE1-201ENST00000368657 POLRMTO00411 1230 aaKnown RBP14.84□□□□□ -0.03
TUBE1-201ENST00000368657 FKBP8Q14318 412 aa14.84□□□□□ -0.03
TUBE1-201ENST00000368657 ATG3Q9NT62 314 aa14.84□□□□□ -0.03
TUBE1-201ENST00000368657 TSKSQ9UJT2 592 aa14.84□□□□□ -0.03
TUBE1-201ENST00000368657 SOX10P56693 466 aa14.83□□□□□ -0.04
TUBE1-201ENST00000368657 PNMA8AQ86V59 439 aaPredicted RBP14.83□□□□□ -0.04
TUBE1-201ENST00000368657 SCN4AP35499 1836 aa14.82□□□□□ -0.04
TUBE1-201ENST00000368657 DICER1Q9UPY3 1922 aaKnown RBP14.82□□□□□ -0.04
TUBE1-201ENST00000368657 EAPPQ56P03 285 aaPredicted RBP14.82□□□□□ -0.04
TUBE1-201ENST00000368657 HABP4Q5JVS0 413 aaKnown RBP14.82□□□□□ -0.04
TUBE1-201ENST00000368657 PAXIP1Q6ZW49 1069 aaPredicted RBP14.82□□□□□ -0.04
TUBE1-201ENST00000368657 NBPF15Q8N660 670 aa14.82□□□□□ -0.04
TUBE1-201ENST00000368657 EDC4Q6P2E9 1401 aaKnown RBP14.82□□□□□ -0.04
TUBE1-201ENST00000368657 H0YIN7 160 aa14.81□□□□□ -0.04
TUBE1-201ENST00000368657 CASP8AP2Q9UKL3 1982 aa14.81□□□□□ -0.04
TUBE1-201ENST00000368657 CYP4F22Q6NT55 531 aa14.8□□□□□ -0.04
TUBE1-201ENST00000368657 COG3Q96JB2 828 aa14.8□□□□□ -0.04
TUBE1-201ENST00000368657 DDX21Q9NR30 783 aaKnown RBP eCLIP14.8□□□□□ -0.04
TUBE1-201ENST00000368657 HACL1Q9UJ83 578 aa14.8□□□□□ -0.04
TUBE1-201ENST00000368657 SPG7Q9UQ90 795 aa14.8□□□□□ -0.04
TUBE1-201ENST00000368657 USP42Q9H9J4 1324 aaKnown RBP14.8□□□□□ -0.04
TUBE1-201ENST00000368657 LTBP3Q9NS15 1303 aa14.8□□□□□ -0.04
TUBE1-201ENST00000368657 THSD7BQ9C0I4 1608 aa14.8□□□□□ -0.04
TUBE1-201ENST00000368657 GRM1Q13255 1194 aa14.79□□□□□ -0.04
TUBE1-201ENST00000368657 C2CD5Q86YS7 1000 aa14.79□□□□□ -0.04
TUBE1-201ENST00000368657 TERF2IPQ9NYB0 399 aa14.79□□□□□ -0.04
TUBE1-201ENST00000368657 SRP68Q9UHB9 627 aaKnown RBP14.79□□□□□ -0.04
TUBE1-201ENST00000368657 RTL1A6NKG5 1358 aa14.78□□□□□ -0.04
TUBE1-201ENST00000368657 MAP1SQ66K74 1059 aaPredicted RBP14.78□□□□□ -0.04
TUBE1-201ENST00000368657 SLC4A9Q96Q91 983 aa14.78□□□□□ -0.04
TUBE1-201ENST00000368657 KDRP35968 1356 aa14.77□□□□□ -0.04
TUBE1-201ENST00000368657 DLL1O00548 723 aa14.77□□□□□ -0.05
TUBE1-201ENST00000368657 EPHX2P34913 555 aa14.77□□□□□ -0.05
TUBE1-201ENST00000368657 TMC1Q8TDI8 760 aa14.77□□□□□ -0.05
TUBE1-201ENST00000368657 TAOK3Q9H2K8 898 aa14.77□□□□□ -0.05
TUBE1-201ENST00000368657 PDZRN3Q9UPQ7 1066 aa14.77□□□□□ -0.05
TUBE1-201ENST00000368657 ZNF831Q5JPB2 1677 aa14.77□□□□□ -0.05
TUBE1-201ENST00000368657 C21orf2O43822 256 aa14.76□□□□□ -0.05
TUBE1-201ENST00000368657 ZPR1O75312 459 aa14.76□□□□□ -0.05
TUBE1-201ENST00000368657 FBLN1P23142 703 aa14.76□□□□□ -0.05
TUBE1-201ENST00000368657 BRPF1P55201 1214 aaPredicted RBP14.76□□□□□ -0.05
TUBE1-201ENST00000368657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.76□□□□□ -0.05
TUBE1-201ENST00000368657 AOC2O75106 756 aa14.75□□□□□ -0.05
TUBE1-201ENST00000368657 IFNL2Q8IZJ0 200 aa14.74□□□□□ -0.05
TUBE1-201ENST00000368657 SLC12A5Q9H2X9 1139 aa14.74□□□□□ -0.05
TUBE1-201ENST00000368657 TLL2Q9Y6L7 1015 aa14.74□□□□□ -0.05
TUBE1-201ENST00000368657 LTBP1Q14766 1721 aa14.74□□□□□ -0.05
TUBE1-201ENST00000368657 DLEC1Q9Y238 1755 aa14.73□□□□□ -0.05
TUBE1-201ENST00000368657 SERPINB2P05120 415 aa14.73□□□□□ -0.05
TUBE1-201ENST00000368657 FER1L6Q2WGJ9 1857 aa14.73□□□□□ -0.05
TUBE1-201ENST00000368657 ADAMTSL1Q8N6G6 1762 aa14.73□□□□□ -0.05
TUBE1-201ENST00000368657 CRKLP46109 303 aaKnown RBP14.72□□□□□ -0.05
TUBE1-201ENST00000368657 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
TUBE1-201ENST00000368657 SOGA3Q5TF21 947 aa14.72□□□□□ -0.05
TUBE1-201ENST00000368657 ZNF622Q969S3 477 aaKnown RBP eCLIP14.72□□□□□ -0.051e-6■■□□□ 12
TUBE1-201ENST00000368657 MYH14Q7Z406 1995 aaKnown RBP14.71□□□□□ -0.05
TUBE1-201ENST00000368657 ERVV-2B6SEH9 535 aa14.71□□□□□ -0.05
TUBE1-201ENST00000368657 NFIXQ14938 502 aa14.71□□□□□ -0.05
TUBE1-201ENST00000368657 RRS1Q15050 365 aaKnown RBP14.71□□□□□ -0.05
TUBE1-201ENST00000368657 USPL1Q5W0Q7 1092 aa14.71□□□□□ -0.05
TUBE1-201ENST00000368657 HHIPL1Q96JK4 782 aa14.71□□□□□ -0.05
TUBE1-201ENST00000368657 COL5A3P25940 1745 aaPredicted RBP14.71□□□□□ -0.05
TUBE1-201ENST00000368657 INSRP06213 1382 aa14.71□□□□□ -0.06
TUBE1-201ENST00000368657 PHKG2P15735 406 aa14.7□□□□□ -0.06
TUBE1-201ENST00000368657 CST9Q5W186 159 aa14.7□□□□□ -0.06
TUBE1-201ENST00000368657 PDE6BP35913 854 aa14.69□□□□□ -0.06
TUBE1-201ENST00000368657 FXR1P51114 621 aaKnown RBP eCLIP14.69□□□□□ -0.06
TUBE1-201ENST00000368657 HSP90AB2PQ58FF8 381 aa14.69□□□□□ -0.06
TUBE1-201ENST00000368657 CIAPIN1Q6FI81 312 aa14.68□□□□□ -0.06
TUBE1-201ENST00000368657 A0A1W2PP64 1363 aa14.68□□□□□ -0.06
TUBE1-201ENST00000368657 NRXN2Q9P2S2 1712 aa14.67□□□□□ -0.06
TUBE1-201ENST00000368657 AFDNP55196 1824 aaKnown RBP14.67□□□□□ -0.06
TUBE1-201ENST00000368657 SAPCD2Q86UD0 394 aa14.67□□□□□ -0.06
TUBE1-201ENST00000368657 CNKSR1Q969H4 720 aa14.67□□□□□ -0.06
TUBE1-201ENST00000368657 KIF24Q5T7B8 1368 aa14.66□□□□□ -0.06
TUBE1-201ENST00000368657 PUS7Q96PZ0 661 aaKnown RBP14.66□□□□□ -0.06
TUBE1-201ENST00000368657 BRIP1Q9BX63 1249 aa14.66□□□□□ -0.06
TUBE1-201ENST00000368657 NARFQ9UHQ1 456 aa14.66□□□□□ -0.06
TUBE1-201ENST00000368657 FMR1Q06787 632 aaKnown RBP eCLIP14.65□□□□□ -0.06
TUBE1-201ENST00000368657 INTS5Q6P9B9 1019 aaKnown RBP14.65□□□□□ -0.06
TUBE1-201ENST00000368657 GPC2Q8N158 579 aa14.65□□□□□ -0.06
TUBE1-201ENST00000368657 RNF123Q5XPI4 1314 aa14.65□□□□□ -0.06
TUBE1-201ENST00000368657 TONSLQ96HA7 1378 aa14.64□□□□□ -0.07
TUBE1-201ENST00000368657 RAB3GAP2Q9H2M9 1393 aa14.64□□□□□ -0.07
TUBE1-201ENST00000368657 PTCD1O75127 700 aaKnown RBP14.64□□□□□ -0.07
TUBE1-201ENST00000368657 NOGQ13253 232 aa14.64□□□□□ -0.07
TUBE1-201ENST00000368657 CTU1Q7Z7A3 348 aaKnown RBP14.64□□□□□ -0.07
TUBE1-201ENST00000368657 SLC17A8Q8NDX2 589 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms