RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 TMEM63CQ9P1W3 806 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 MSH6P52701 1360 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 CD2BP2O95400 341 aaKnown RBP12.73□□□□□ -0.37
EBF3-202ENST00000368648 NFE2L2Q16236 605 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 KIF6Q6ZMV9 814 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
EBF3-202ENST00000368648 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
EBF3-202ENST00000368648 GNAI3P08754 354 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
EBF3-202ENST00000368648 TPM1P09493 284 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 CPA1P15085 419 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 BICDL1Q6ZP65 573 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
EBF3-202ENST00000368648 MX1P20591 662 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 DNM1Q05193 864 aaKnown RBP12.72□□□□□ -0.37
EBF3-202ENST00000368648 GTF3C6Q969F1 213 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 TSPYL1Q9H0U9 437 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 STX6O43752 255 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 HSP90AB2PQ58FF8 381 aa12.72□□□□□ -0.37
EBF3-202ENST00000368648 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
EBF3-202ENST00000368648 GNAT3A8MTJ3 354 aa12.71□□□□□ -0.37
EBF3-202ENST00000368648 WASHC4Q2M389 1173 aa12.71□□□□□ -0.37
EBF3-202ENST00000368648 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.37
EBF3-202ENST00000368648 SNX21Q969T3 373 aa12.71□□□□□ -0.37
EBF3-202ENST00000368648 CHMP4CQ96CF2 233 aa12.71□□□□□ -0.37
EBF3-202ENST00000368648 KRT24Q2M2I5 525 aa12.71□□□□□ -0.37
EBF3-202ENST00000368648 NCBP3Q53F19 620 aaKnown RBP12.71□□□□□ -0.37
EBF3-202ENST00000368648 TSPYL6Q8N831 410 aa12.71□□□□□ -0.37
EBF3-202ENST00000368648 TIGD1Q96MW7 591 aa12.71□□□□□ -0.37
EBF3-202ENST00000368648 SRRTQ9BXP5 876 aaKnown RBP12.71□□□□□ -0.37
EBF3-202ENST00000368648 UHRF1BP1Q6BDS2 1440 aa12.71□□□□□ -0.37
EBF3-202ENST00000368648 FSD2A1L4K1 749 aa12.71□□□□□ -0.38
EBF3-202ENST00000368648 TOM1O60784 492 aa12.71□□□□□ -0.38
EBF3-202ENST00000368648 CFAP100Q494V2 611 aa12.71□□□□□ -0.38
EBF3-202ENST00000368648 LUZP1Q86V48 1076 aa12.71□□□□□ -0.38
EBF3-202ENST00000368648 TESK2Q96S53 571 aa12.71□□□□□ -0.38
EBF3-202ENST00000368648 NOL10Q9BSC4 688 aaKnown RBP12.71□□□□□ -0.38
EBF3-202ENST00000368648 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.38
EBF3-202ENST00000368648 GADD45BO75293 160 aaPredicted RBP12.7□□□□□ -0.38
EBF3-202ENST00000368648 LMAN1P49257 510 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 NAP1L1P55209 391 aaKnown RBP12.7□□□□□ -0.38
EBF3-202ENST00000368648 HDAC1Q13547 482 aaPredicted RBP12.7□□□□□ -0.38
EBF3-202ENST00000368648 CEP135Q66GS9 1140 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 CCDC34Q96HJ3 373 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 AK7Q96M32 723 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 MEIS3Q99687 375 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 TTC22Q5TAA0 569 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 RPAP2Q8IXW5 612 aaPredicted RBP12.7□□□□□ -0.38
EBF3-202ENST00000368648 ANTXR1Q9H6X2 564 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 GJB2P29033 226 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 NFXL1Q6ZNB6 911 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
EBF3-202ENST00000368648 SFPQP23246 707 aaKnown RBP eCLIP12.69□□□□□ -0.38
EBF3-202ENST00000368648 CENPHQ9H3R5 247 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 CALCOCO1Q9P1Z2 691 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 PSMA5P28066 241 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 ARHGEF12Q9NZN5 1544 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 IPO7O95373 1038 aaKnown RBP12.69□□□□□ -0.38
EBF3-202ENST00000368648 CT47B1P0C2W7 299 aaPredicted RBP12.69□□□□□ -0.38
EBF3-202ENST00000368648 TRIM29Q14134 588 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 KRT222Q8N1A0 295 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 DNAJC25Q9H1X3 360 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 MYO5CQ9NQX4 1742 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 COL17A1Q9UMD9 1497 aaPredicted RBP12.69□□□□□ -0.38
EBF3-202ENST00000368648 ANO6Q4KMQ2 910 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 OLFM4Q6UX06 510 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 CEP57L1Q8IYX8 460 aa12.69□□□□□ -0.38
EBF3-202ENST00000368648 MBD5Q9P267 1494 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 FYB1O15117 783 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 RUFY1Q96T51 708 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 DACT1Q9NYF0 836 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 CERS3Q8IU89 383 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 CPLX3Q8WVH0 158 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 C19orf44Q9H6X5 657 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 BCL2L12Q9HB09 334 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 TMOD3Q9NYL9 352 aa12.68□□□□□ -0.38
EBF3-202ENST00000368648 SKILP12757 684 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 C10orf67Q8IYJ2 551 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 TTC21BQ7Z4L5 1316 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 CPLX2Q6PUV4 134 aaKnown RBP12.67□□□□□ -0.38
EBF3-202ENST00000368648 AACSQ86V21 672 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 RAB11FIP4Q86YS3 637 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 ANKRD24Q8TF21 1146 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 SRCIN1Q9C0H9 1055 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 TAF3Q5VWG9 929 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 TMC6Q7Z403 805 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 CARD14Q9BXL6 1004 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
EBF3-202ENST00000368648 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 LIMCH1Q9UPQ0 1083 aa12.67□□□□□ -0.38
EBF3-202ENST00000368648 EXOC5O00471 708 aa12.66□□□□□ -0.38
EBF3-202ENST00000368648 PHACTR2O75167 634 aa12.66□□□□□ -0.38
EBF3-202ENST00000368648 UBE2HP62256 183 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms