RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
C1orf43-204ENST00000368518 U2AF1Q01081 240 aaKnown RBP eCLIP23.63■■□□□ 1.37
C1orf43-204ENST00000368518 VSIG10Q8N0Z9 540 aa23.63■■□□□ 1.37
C1orf43-204ENST00000368518 UBR2Q8IWV8 1755 aa23.63■■□□□ 1.37
C1orf43-204ENST00000368518 FCHSD2O94868 740 aa23.62■■□□□ 1.37
C1orf43-204ENST00000368518 ZNF496Q96IT1 587 aaPredicted RBP23.62■■□□□ 1.37
C1orf43-204ENST00000368518 COL15A1P39059 1388 aa23.62■■□□□ 1.37
C1orf43-204ENST00000368518 TM4SF1P30408 202 aa23.61■■□□□ 1.37
C1orf43-204ENST00000368518 ZNF790Q6PG37 636 aa23.61■■□□□ 1.37
C1orf43-204ENST00000368518 GPBP1L1Q9HC44 474 aaPredicted RBP23.61■■□□□ 1.37
C1orf43-204ENST00000368518 ADCY9O60503 1353 aa23.61■■□□□ 1.37
C1orf43-204ENST00000368518 POLRMTO00411 1230 aaKnown RBP23.6■■□□□ 1.37
C1orf43-204ENST00000368518 STARD3NLO95772 234 aa23.6■■□□□ 1.37
C1orf43-204ENST00000368518 ARHGAP27Q6ZUM4 889 aa23.6■■□□□ 1.37
C1orf43-204ENST00000368518 NARFQ9UHQ1 456 aa23.6■■□□□ 1.37
C1orf43-204ENST00000368518 KCNA3P22001 575 aa23.59■■□□□ 1.37
C1orf43-204ENST00000368518 SIPA1L3O60292 1781 aaPredicted RBP23.59■■□□□ 1.37
C1orf43-204ENST00000368518 HEG1Q9ULI3 1381 aa23.57■■□□□ 1.36
C1orf43-204ENST00000368518 CHRNA5P30532 468 aa23.57■■□□□ 1.36
C1orf43-204ENST00000368518 NFIXQ14938 502 aa23.57■■□□□ 1.36
C1orf43-204ENST00000368518 PIM2Q9P1W9 311 aa23.57■■□□□ 1.36
C1orf43-204ENST00000368518 ZNF330Q9Y3S2 320 aaPredicted RBP23.57■■□□□ 1.36
C1orf43-204ENST00000368518 BRCA1P38398 1863 aaKnown RBP23.56■■□□□ 1.36
C1orf43-204ENST00000368518 BTBD11A6QL63 1104 aa23.56■■□□□ 1.36
C1orf43-204ENST00000368518 KCNQ3O43525 872 aa23.56■■□□□ 1.36
C1orf43-204ENST00000368518 BCL2L12Q9HB09 334 aa23.56■■□□□ 1.36
C1orf43-204ENST00000368518 CEMIPQ8WUJ3 1361 aa23.55■■□□□ 1.36
C1orf43-204ENST00000368518 MCM10Q7L590 875 aa23.55■■□□□ 1.36
C1orf43-204ENST00000368518 FMNL2Q96PY5 1086 aa23.55■■□□□ 1.36
C1orf43-204ENST00000368518 DALRD3Q5D0E6 543 aaKnown RBP23.54■■□□□ 1.36
C1orf43-204ENST00000368518 BICDL1Q6ZP65 573 aa23.54■■□□□ 1.36
C1orf43-204ENST00000368518 RTF1Q92541 710 aaKnown RBP23.54■■□□□ 1.36
C1orf43-204ENST00000368518 TEX13AQ9BXU3 409 aaPredicted RBP23.54■■□□□ 1.36
C1orf43-204ENST00000368518 EIF5P55010 431 aaKnown RBP23.53■■□□□ 1.36
C1orf43-204ENST00000368518 AFDNP55196 1824 aaKnown RBP23.52■■□□□ 1.36
C1orf43-204ENST00000368518 A0A087WZG4 1122 aa23.52■■□□□ 1.36
C1orf43-204ENST00000368518 A1BGP04217 495 aa23.52■■□□□ 1.36
C1orf43-204ENST00000368518 SERPINB2P05120 415 aa23.52■■□□□ 1.36
C1orf43-204ENST00000368518 DCTN1Q14203 1278 aa23.52■■□□□ 1.36
C1orf43-204ENST00000368518 TBC1D2BQ9UPU7 963 aa23.51■■□□□ 1.35
C1orf43-204ENST00000368518 ARFGEF1Q9Y6D6 1849 aa23.49■■□□□ 1.35
C1orf43-204ENST00000368518 PRAMEF22A3QJZ6 481 aa23.48■■□□□ 1.35
C1orf43-204ENST00000368518 PIP4K2AP48426 406 aaPredicted RBP23.48■■□□□ 1.35
C1orf43-204ENST00000368518 TBC1D9BQ66K14 1250 aa23.48■■□□□ 1.35
C1orf43-204ENST00000368518 IL6STP40189 918 aaPredicted RBP23.47■■□□□ 1.35
C1orf43-204ENST00000368518 C9orf131Q5VYM1 1079 aa23.47■■□□□ 1.35
C1orf43-204ENST00000368518 NPM2Q86SE8 214 aaKnown RBP23.47■■□□□ 1.35
C1orf43-204ENST00000368518 USP16Q9Y5T5 823 aa23.47■■□□□ 1.35
C1orf43-204ENST00000368518 NRXN2Q9P2S2 1712 aa23.47■■□□□ 1.35
C1orf43-204ENST00000368518 CARMIL3Q8ND23 1372 aa23.45■■□□□ 1.34
C1orf43-204ENST00000368518 C2CD5Q86YS7 1000 aa23.44■■□□□ 1.34
C1orf43-204ENST00000368518 CCDC24Q8N4L8 307 aa23.44■■□□□ 1.34
C1orf43-204ENST00000368518 MIS18AQ9NYP9 233 aa23.44■■□□□ 1.34
C1orf43-204ENST00000368518 SCN7AQ01118 1682 aa23.44■■□□□ 1.34
C1orf43-204ENST00000368518 CEP350Q5VT06 3117 aa23.43■■□□□ 1.34
C1orf43-204ENST00000368518 KIF3CO14782 793 aa23.43■■□□□ 1.34
C1orf43-204ENST00000368518 HTATSF1O43719 755 aaKnown RBP23.43■■□□□ 1.34
C1orf43-204ENST00000368518 NEFMP07197 916 aa23.43■■□□□ 1.34
C1orf43-204ENST00000368518 SNRPA1P09661 255 aaKnown RBP23.42■■□□□ 1.34
C1orf43-204ENST00000368518 RNF181Q9P0P0 153 aa23.42■■□□□ 1.34
C1orf43-204ENST00000368518 H0YIN7 160 aa23.41■■□□□ 1.34
C1orf43-204ENST00000368518 CAMTA2O94983 1202 aa23.41■■□□□ 1.34
C1orf43-204ENST00000368518 TAF7Q15545 349 aaPredicted RBP23.41■■□□□ 1.34
C1orf43-204ENST00000368518 DZIP3Q86Y13 1208 aaKnown RBP23.41■■□□□ 1.34
C1orf43-204ENST00000368518 TTLL6Q8N841 843 aa23.4■■□□□ 1.34
C1orf43-204ENST00000368518 NPHP1O15259 732 aa23.39■■□□□ 1.33
C1orf43-204ENST00000368518 RASSF7Q02833 373 aa23.39■■□□□ 1.33
C1orf43-204ENST00000368518 SETDB2Q96T68 719 aa23.39■■□□□ 1.33
C1orf43-204ENST00000368518 NMRK2Q9NPI5 230 aa23.39■■□□□ 1.33
C1orf43-204ENST00000368518 DLEC1Q9Y238 1755 aa23.38■■□□□ 1.33
C1orf43-204ENST00000368518 DLG5Q8TDM6 1919 aa23.38■■□□□ 1.33
C1orf43-204ENST00000368518 PRR5LQ6MZQ0 368 aa23.38■■□□□ 1.33
C1orf43-204ENST00000368518 ZNF622Q969S3 477 aaKnown RBP eCLIP23.38■■□□□ 1.33
C1orf43-204ENST00000368518 PLEKHF1Q96S99 279 aa23.38■■□□□ 1.33
C1orf43-204ENST00000368518 THUMPD2Q9BTF0 503 aaKnown RBP23.37■■□□□ 1.33
C1orf43-204ENST00000368518 ANKRD31Q8N7Z5 1873 aa23.36■■□□□ 1.33
C1orf43-204ENST00000368518 PDE6BP35913 854 aa23.36■■□□□ 1.33
C1orf43-204ENST00000368518 BRIP1Q9BX63 1249 aa23.36■■□□□ 1.33
C1orf43-204ENST00000368518 BCORQ6W2J9 1755 aa23.36■■□□□ 1.33
C1orf43-204ENST00000368518 SBF1O95248 1867 aa23.35■■□□□ 1.33
C1orf43-204ENST00000368518 NBPF26B4DH59 902 aa23.35■■□□□ 1.33
C1orf43-204ENST00000368518 HSPA6P17066 643 aa23.35■■□□□ 1.33
C1orf43-204ENST00000368518 NFE2L2Q16236 605 aa23.35■■□□□ 1.33
C1orf43-204ENST00000368518 NBPF10Q6P3W6 841 aaKnown RBP23.35■■□□□ 1.33
C1orf43-204ENST00000368518 NBPF15Q8N660 670 aa23.35■■□□□ 1.33
C1orf43-204ENST00000368518 CNBD1Q8NA66 436 aa23.35■■□□□ 1.33
C1orf43-204ENST00000368518 ZNF219Q9P2Y4 722 aaPredicted RBP23.35■■□□□ 1.33
C1orf43-204ENST00000368518 MAPK8IP3Q9UPT6 1336 aa23.34■■□□□ 1.33
C1orf43-204ENST00000368518 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
C1orf43-204ENST00000368518 PNNQ9H307 717 aaKnown RBP23.33■■□□□ 1.33
C1orf43-204ENST00000368518 ST5P78524 1137 aa23.32■■□□□ 1.32
C1orf43-204ENST00000368518 COL11A2P13942 1736 aaPredicted RBP23.32■■□□□ 1.32
C1orf43-204ENST00000368518 TOMM70O94826 608 aa23.31■■□□□ 1.32
C1orf43-204ENST00000368518 PRELPP51888 382 aa23.31■■□□□ 1.32
C1orf43-204ENST00000368518 RALBP1Q15311 655 aa23.31■■□□□ 1.32
C1orf43-204ENST00000368518 NBPF5PQ86XG9 351 aaPredicted RBP23.31■■□□□ 1.32
C1orf43-204ENST00000368518 NGEFQ8N5V2 710 aa23.31■■□□□ 1.32
C1orf43-204ENST00000368518 PNISRQ8TF01 805 aaKnown RBP23.31■■□□□ 1.32
C1orf43-204ENST00000368518 ZNF652Q9Y2D9 606 aa23.31■■□□□ 1.32
C1orf43-204ENST00000368518 KDM2BQ8NHM5 1336 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms