RNA–Protein interactions for RNA: ENST00000367390.7

LHX9-203, Transcript of LIM homeobox 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LHX9, Length 7,413 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-203ENST00000367390 PSMD6Q15008 389 aa11.15□□□□□ -0.63
LHX9-203ENST00000367390 NUF2Q9BZD4 464 aa11.15□□□□□ -0.63
LHX9-203ENST00000367390 VCXQ9H320 206 aa11.15□□□□□ -0.63
LHX9-203ENST00000367390 CTTNBP2Q8WZ74 1663 aa11.15□□□□□ -0.63
LHX9-203ENST00000367390 RNF168Q8IYW5 571 aaPredicted RBP11.14□□□□□ -0.63
LHX9-203ENST00000367390 RIC3Q7Z5B4 369 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 TRIM22Q8IYM9 498 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 TSG101Q99816 390 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
LHX9-203ENST00000367390 ZFYVE1Q9HBF4 777 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 EFCAB5A4FU69 1503 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 FRMD4BQ9Y2L6 1034 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 GNL1P36915 607 aaPredicted RBP11.14□□□□□ -0.63
LHX9-203ENST00000367390 CFAP157Q5JU67 520 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 CCDC129Q6ZRS4 1044 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 FILIP1Q7Z7B0 1213 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 AIMP1Q12904 312 aaKnown RBP11.14□□□□□ -0.63
LHX9-203ENST00000367390 MAP7Q14244 749 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 FKBP15Q5T1M5 1219 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 PPP1R12AO14974 1030 aaPredicted RBP11.14□□□□□ -0.63
LHX9-203ENST00000367390 SMIM24O75264 130 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 CXorf38Q8TB03 319 aa11.14□□□□□ -0.63
LHX9-203ENST00000367390 PDE3BQ13370 1112 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 GEN1Q17RS7 908 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.13□□□□□ -0.63
LHX9-203ENST00000367390 SYF2O95926 243 aaKnown RBP11.13□□□□□ -0.63
LHX9-203ENST00000367390 NAA15Q9BXJ9 866 aaKnown RBP11.13□□□□□ -0.63
LHX9-203ENST00000367390 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 WDR46O15213 610 aaKnown RBP11.13□□□□□ -0.63
LHX9-203ENST00000367390 ATXN8OSP0DMR3 200 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 HAUS7Q99871 368 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 XAB2Q9HCS7 855 aaKnown RBP11.13□□□□□ -0.63
LHX9-203ENST00000367390 MKL2Q9ULH7 1088 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 CCDC14Q49A88 953 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 CNTROBQ8N137 903 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 GRIN2BQ13224 1484 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 CCDC172P0C7W6 258 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 XPCQ01831 940 aaPredicted RBP11.13□□□□□ -0.63
LHX9-203ENST00000367390 HSF2BPO75031 334 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
LHX9-203ENST00000367390 URI1O94763 535 aaPredicted RBP11.13□□□□□ -0.63
LHX9-203ENST00000367390 PDCD2Q16342 344 aaPredicted RBP11.13□□□□□ -0.63
LHX9-203ENST00000367390 TTC39AQ5SRH9 613 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 CCDC110Q8TBZ0 833 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 STIM2Q9P246 746 aa11.13□□□□□ -0.63
LHX9-203ENST00000367390 CYB5RLQ6IPT4 315 aa11.12□□□□□ -0.63
LHX9-203ENST00000367390 PPP4R4Q6NUP7 873 aa11.12□□□□□ -0.63
LHX9-203ENST00000367390 RAB3IPQ96QF0 476 aaPredicted RBP11.12□□□□□ -0.63
LHX9-203ENST00000367390 CFAP100Q494V2 611 aa11.12□□□□□ -0.63
LHX9-203ENST00000367390 TDRD12Q587J7 1177 aaKnown RBP11.12□□□□□ -0.63
LHX9-203ENST00000367390 EHBP1L1Q8N3D4 1523 aa11.12□□□□□ -0.63
LHX9-203ENST00000367390 TOPBP1Q92547 1522 aa11.12□□□□□ -0.63
LHX9-203ENST00000367390 ZHX1Q9UKY1 873 aaPredicted RBP11.12□□□□□ -0.63
LHX9-203ENST00000367390 ALS2CR12Q96Q35 445 aa11.12□□□□□ -0.63
LHX9-203ENST00000367390 ZKSCAN2Q63HK3 967 aa11.12□□□□□ -0.63
LHX9-203ENST00000367390 ZBED9Q6R2W3 1325 aa11.12□□□□□ -0.63
LHX9-203ENST00000367390 TRAK2O60296 914 aa11.12□□□□□ -0.63
LHX9-203ENST00000367390 EVC2Q86UK5 1308 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 RIOK3O14730 519 aaKnown RBP11.11□□□□□ -0.63
LHX9-203ENST00000367390 VIMP08670 466 aaKnown RBP11.11□□□□□ -0.63
LHX9-203ENST00000367390 SIRT1Q96EB6 747 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 MBD3O95983 291 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 POLD1P28340 1107 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 RFX1P22670 979 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 CDR2Q01850 454 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 FKBP5Q13451 457 aaPredicted RBP11.11□□□□□ -0.63
LHX9-203ENST00000367390 UPF3BQ9BZI7 483 aaKnown RBP11.11□□□□□ -0.63
LHX9-203ENST00000367390 SMTNL1A8MU46 457 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 ANKS4BQ8N8V4 417 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 ZSCAN31Q96LW9 406 aaPredicted RBP11.11□□□□□ -0.63
LHX9-203ENST00000367390 CRBNQ96SW2 442 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.11□□□□□ -0.63
LHX9-203ENST00000367390 SYNCQ9H7C4 482 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 CIB2O75838 187 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 VCX3BQ9H321 246 aa11.11□□□□□ -0.63
LHX9-203ENST00000367390 VPS41P49754 854 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 HMGB1P1B2RPK0 211 aaPredicted RBP11.1□□□□□ -0.63
LHX9-203ENST00000367390 RAP1GDS1P52306 607 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 MICALL1Q8N3F8 863 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 RSRC1Q96IZ7 334 aaKnown RBP11.1□□□□□ -0.63
LHX9-203ENST00000367390 PCF11O94913 1555 aaKnown RBP11.1□□□□□ -0.63
LHX9-203ENST00000367390 BICRAQ9NZM4 1560 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 SF3B2Q13435 895 aaKnown RBP11.1□□□□□ -0.63
LHX9-203ENST00000367390 GSDMBQ8TAX9 411 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 LUC7L2Q9Y383 392 aaKnown RBP11.1□□□□□ -0.63
LHX9-203ENST00000367390 PDCP20941 246 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 CKAP4Q07065 602 aaKnown RBP11.1□□□□□ -0.63
LHX9-203ENST00000367390 DBN1Q16643 649 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 MIER3Q7Z3K6 550 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 VPS52Q8N1B4 723 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 DDX12PQ92771 950 aa11.1□□□□□ -0.63
LHX9-203ENST00000367390 RNF8O76064 485 aa11.09□□□□□ -0.63
LHX9-203ENST00000367390 RRP9O43818 475 aaKnown RBP11.09□□□□□ -0.63
LHX9-203ENST00000367390 SLC4A1P02730 911 aa11.09□□□□□ -0.63
LHX9-203ENST00000367390 MCM6Q14566 821 aa11.09□□□□□ -0.63
LHX9-203ENST00000367390 SELENOSQ9BQE4 189 aa11.09□□□□□ -0.63
LHX9-203ENST00000367390 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms