RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ARFGEF1Q9Y6D6 1849 aa19.85■□□□□ 0.77
CTSD-202ENST00000367196 FCHSD2O94868 740 aa19.84■□□□□ 0.77
CTSD-202ENST00000367196 USPL1Q5W0Q7 1092 aa19.84■□□□□ 0.77
CTSD-202ENST00000367196 ZBTB1Q9Y2K1 713 aa19.84■□□□□ 0.77
CTSD-202ENST00000367196 A0A087WZG4 1122 aa19.83■□□□□ 0.77
CTSD-202ENST00000367196 PRKAR2BP31323 418 aa19.83■□□□□ 0.77
CTSD-202ENST00000367196 ZNF790Q6PG37 636 aa19.83■□□□□ 0.77
CTSD-202ENST00000367196 PIM2Q9P1W9 311 aa19.83■□□□□ 0.77
CTSD-202ENST00000367196 POLRMTO00411 1230 aaKnown RBP19.82■□□□□ 0.76
CTSD-202ENST00000367196 DDR1Q08345 913 aa19.82■□□□□ 0.76
CTSD-202ENST00000367196 IL17REQ8NFR9 667 aa19.82■□□□□ 0.76
CTSD-202ENST00000367196 RSPH6AQ9H0K4 717 aa19.82■□□□□ 0.76
CTSD-202ENST00000367196 CEMIPQ8WUJ3 1361 aa19.82■□□□□ 0.76
CTSD-202ENST00000367196 HEG1Q9ULI3 1381 aa19.82■□□□□ 0.76
CTSD-202ENST00000367196 U2AF1L5P0DN76 240 aaPredicted RBP19.81■□□□□ 0.76
CTSD-202ENST00000367196 PPP2R1AP30153 589 aa19.81■□□□□ 0.76
CTSD-202ENST00000367196 TM4SF1P30408 202 aa19.81■□□□□ 0.76
CTSD-202ENST00000367196 U2AF1Q01081 240 aaKnown RBP eCLIP19.81■□□□□ 0.76
CTSD-202ENST00000367196 RTF1Q92541 710 aaKnown RBP19.81■□□□□ 0.76
CTSD-202ENST00000367196 FMNL2Q96PY5 1086 aa19.81■□□□□ 0.76
CTSD-202ENST00000367196 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
CTSD-202ENST00000367196 DALRD3Q5D0E6 543 aaKnown RBP19.8■□□□□ 0.76
CTSD-202ENST00000367196 ARHGAP27Q6ZUM4 889 aa19.8■□□□□ 0.76
CTSD-202ENST00000367196 NPM2Q86SE8 214 aaKnown RBP19.8■□□□□ 0.76
CTSD-202ENST00000367196 ZNF526Q8TF50 670 aaPredicted RBP19.8■□□□□ 0.76
CTSD-202ENST00000367196 NRXN2Q9P2S2 1712 aa19.79■□□□□ 0.76
CTSD-202ENST00000367196 ZNF496Q96IT1 587 aaPredicted RBP19.79■□□□□ 0.76
CTSD-202ENST00000367196 AFDNP55196 1824 aaKnown RBP19.79■□□□□ 0.76
CTSD-202ENST00000367196 BTBD11A6QL63 1104 aa19.78■□□□□ 0.76
CTSD-202ENST00000367196 NEFMP07197 916 aa19.78■□□□□ 0.76
CTSD-202ENST00000367196 SCN7AQ01118 1682 aa19.78■□□□□ 0.76
CTSD-202ENST00000367196 KCNA3P22001 575 aa19.77■□□□□ 0.76
CTSD-202ENST00000367196 EIF5P55010 431 aaKnown RBP19.77■□□□□ 0.76
CTSD-202ENST00000367196 NFIXQ14938 502 aa19.77■□□□□ 0.76
CTSD-202ENST00000367196 PHACTR3Q96KR7 559 aa19.77■□□□□ 0.76
CTSD-202ENST00000367196 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
CTSD-202ENST00000367196 IL6STP40189 918 aaPredicted RBP19.75■□□□□ 0.75
CTSD-202ENST00000367196 DLEC1Q9Y238 1755 aa19.75■□□□□ 0.75
CTSD-202ENST00000367196 SERPINB2P05120 415 aa19.74■□□□□ 0.75
CTSD-202ENST00000367196 BCL2L12Q9HB09 334 aa19.74■□□□□ 0.75
CTSD-202ENST00000367196 ZNF330Q9Y3S2 320 aaPredicted RBP19.74■□□□□ 0.75
CTSD-202ENST00000367196 CHRNA5P30532 468 aa19.73■□□□□ 0.75
CTSD-202ENST00000367196 PDZRN3Q9UPQ7 1066 aa19.72■□□□□ 0.75
CTSD-202ENST00000367196 CARMIL3Q8ND23 1372 aa19.71■□□□□ 0.75
CTSD-202ENST00000367196 SNRPA1P09661 255 aaKnown RBP19.7■□□□□ 0.74
CTSD-202ENST00000367196 C9orf131Q5VYM1 1079 aa19.7■□□□□ 0.74
CTSD-202ENST00000367196 MCM10Q7L590 875 aa19.7■□□□□ 0.74
CTSD-202ENST00000367196 PNNQ9H307 717 aaKnown RBP19.7■□□□□ 0.74
CTSD-202ENST00000367196 BCORQ6W2J9 1755 aa19.7■□□□□ 0.74
CTSD-202ENST00000367196 H0YIN7 160 aa19.69■□□□□ 0.74
CTSD-202ENST00000367196 BICDL1Q6ZP65 573 aa19.69■□□□□ 0.74
CTSD-202ENST00000367196 KIF3CO14782 793 aa19.68■□□□□ 0.74
CTSD-202ENST00000367196 NPHP1O15259 732 aa19.68■□□□□ 0.74
CTSD-202ENST00000367196 A1BGP04217 495 aa19.68■□□□□ 0.74
CTSD-202ENST00000367196 HSPA6P17066 643 aa19.68■□□□□ 0.74
CTSD-202ENST00000367196 TBC1D9BQ66K14 1250 aa19.68■□□□□ 0.74
CTSD-202ENST00000367196 C2CD5Q86YS7 1000 aa19.68■□□□□ 0.74
CTSD-202ENST00000367196 TTLL6Q8N841 843 aa19.68■□□□□ 0.74
CTSD-202ENST00000367196 RNF181Q9P0P0 153 aa19.68■□□□□ 0.74
CTSD-202ENST00000367196 TBC1D2BQ9UPU7 963 aa19.68■□□□□ 0.74
CTSD-202ENST00000367196 ZC3H4Q9UPT8 1303 aaKnown RBP19.68■□□□□ 0.74
CTSD-202ENST00000367196 PDE6BP35913 854 aa19.67■□□□□ 0.74
CTSD-202ENST00000367196 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
CTSD-202ENST00000367196 ZNF652Q9Y2D9 606 aa19.67■□□□□ 0.74
CTSD-202ENST00000367196 KDM2BQ8NHM5 1336 aa19.67■□□□□ 0.74
CTSD-202ENST00000367196 KCNQ3O43525 872 aa19.66■□□□□ 0.74
CTSD-202ENST00000367196 TAF7Q15545 349 aaPredicted RBP19.66■□□□□ 0.74
CTSD-202ENST00000367196 DZIP3Q86Y13 1208 aaKnown RBP19.66■□□□□ 0.74
CTSD-202ENST00000367196 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
CTSD-202ENST00000367196 BRIP1Q9BX63 1249 aa19.66■□□□□ 0.74
CTSD-202ENST00000367196 SBF1O95248 1867 aa19.66■□□□□ 0.74
CTSD-202ENST00000367196 LAMB4A4D0S4 1761 aa19.65■□□□□ 0.74
CTSD-202ENST00000367196 DLG5Q8TDM6 1919 aa19.65■□□□□ 0.74
CTSD-202ENST00000367196 TOMM70O94826 608 aa19.65■□□□□ 0.74
CTSD-202ENST00000367196 CAMTA2O94983 1202 aa19.65■□□□□ 0.74
CTSD-202ENST00000367196 ST5P78524 1137 aa19.65■□□□□ 0.74
CTSD-202ENST00000367196 CNBD1Q8NA66 436 aa19.65■□□□□ 0.74
CTSD-202ENST00000367196 MAPK8IP3Q9UPT6 1336 aa19.65■□□□□ 0.74
CTSD-202ENST00000367196 RGL2O15211 777 aa19.64■□□□□ 0.73
CTSD-202ENST00000367196 CLEC4GQ6UXB4 293 aa19.64■□□□□ 0.73
CTSD-202ENST00000367196 C16orf71Q8IYS4 520 aaPredicted RBP19.64■□□□□ 0.73
CTSD-202ENST00000367196 USP16Q9Y5T5 823 aa19.64■□□□□ 0.73
CTSD-202ENST00000367196 TNRC6CQ9HCJ0 1690 aaKnown RBP19.64■□□□□ 0.73
CTSD-202ENST00000367196 ANKRD31Q8N7Z5 1873 aa19.64■□□□□ 0.73
CTSD-202ENST00000367196 DCTN1Q14203 1278 aa19.63■□□□□ 0.73
CTSD-202ENST00000367196 PRR5LQ6MZQ0 368 aa19.63■□□□□ 0.73
CTSD-202ENST00000367196 LMNB1P20700 586 aa19.62■□□□□ 0.73
CTSD-202ENST00000367196 KDM3BQ7LBC6 1761 aa19.62■□□□□ 0.73
CTSD-202ENST00000367196 RALBP1Q15311 655 aa19.61■□□□□ 0.73
CTSD-202ENST00000367196 ZNF622Q969S3 477 aaKnown RBP eCLIP19.61■□□□□ 0.73
CTSD-202ENST00000367196 NMRK2Q9NPI5 230 aa19.61■□□□□ 0.73
CTSD-202ENST00000367196 COL11A2P13942 1736 aaPredicted RBP19.61■□□□□ 0.73
CTSD-202ENST00000367196 NFE2L2Q16236 605 aa19.6■□□□□ 0.73
CTSD-202ENST00000367196 PRAMEF22A3QJZ6 481 aa19.59■□□□□ 0.73
CTSD-202ENST00000367196 RASSF7Q02833 373 aa19.59■□□□□ 0.73
CTSD-202ENST00000367196 RBM46Q8TBY0 533 aaKnown RBP19.59■□□□□ 0.73
CTSD-202ENST00000367196 PLEKHF1Q96S99 279 aa19.59■□□□□ 0.73
CTSD-202ENST00000367196 TIAM2Q8IVF5 1701 aa19.59■□□□□ 0.73
CTSD-202ENST00000367196 ARFGEF2Q9Y6D5 1785 aa19.58■□□□□ 0.73
CTSD-202ENST00000367196 PIP4K2AP48426 406 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms