RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SMARCA5O60264 1052 aaPredicted RBP18.05■□□□□ 0.48
PRKN-204ENST00000366896 KIAA1211Q6ZU35 1233 aa18.05■□□□□ 0.48
PRKN-204ENST00000366896 NLRP2Q9NX02 1062 aa18.05■□□□□ 0.48
PRKN-204ENST00000366896 APBB1O00213 710 aa18.05■□□□□ 0.48
PRKN-204ENST00000366896 KLHL40Q2TBA0 621 aa18.05■□□□□ 0.48
PRKN-204ENST00000366896 MEIS3Q99687 375 aa18.05■□□□□ 0.48
PRKN-204ENST00000366896 GOLGA6L22H0YM25 854 aa18.04■□□□□ 0.48
PRKN-204ENST00000366896 SSFA2P28290 1259 aa18.04■□□□□ 0.48
PRKN-204ENST00000366896 NRAPQ86VF7 1730 aa18.04■□□□□ 0.48
PRKN-204ENST00000366896 STRN4Q9NRL3 753 aa18.04■□□□□ 0.48
PRKN-204ENST00000366896 CRB1P82279 1406 aa18.04■□□□□ 0.48
PRKN-204ENST00000366896 OFD1O75665 1012 aa18.03■□□□□ 0.48
PRKN-204ENST00000366896 EVA1CP58658 441 aa18.03■□□□□ 0.48
PRKN-204ENST00000366896 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
PRKN-204ENST00000366896 NWD2Q9ULI1 1742 aa18.03■□□□□ 0.48
PRKN-204ENST00000366896 SLIT2O94813 1529 aa18.02■□□□□ 0.48
PRKN-204ENST00000366896 LARP1Q6PKG0 1096 aaKnown RBP18.02■□□□□ 0.48
PRKN-204ENST00000366896 TOM1L2Q6ZVM7 507 aa18.02■□□□□ 0.48
PRKN-204ENST00000366896 USP26Q9BXU7 913 aa18.02■□□□□ 0.48
PRKN-204ENST00000366896 ANP32BQ92688 251 aaKnown RBP18.02■□□□□ 0.47
PRKN-204ENST00000366896 TERF1P54274 439 aa18.01■□□□□ 0.47
PRKN-204ENST00000366896 AK9Q5TCS8 1911 aa18.01■□□□□ 0.47
PRKN-204ENST00000366896 BAG4O95429 457 aaKnown RBP18.01■□□□□ 0.47
PRKN-204ENST00000366896 SDSP20132 328 aa18.01■□□□□ 0.47
PRKN-204ENST00000366896 DDX49Q9Y6V7 483 aaKnown RBP18.01■□□□□ 0.47
PRKN-204ENST00000366896 CARD10Q9BWT7 1032 aa18■□□□□ 0.47
PRKN-204ENST00000366896 OSBPL3Q9H4L5 887 aa18■□□□□ 0.47
PRKN-204ENST00000366896 SLC4A2P04920 1241 aa18■□□□□ 0.47
PRKN-204ENST00000366896 CASC1Q6TDU7 716 aa18■□□□□ 0.47
PRKN-204ENST00000366896 PDZRN4Q6ZMN7 1036 aaPredicted RBP18■□□□□ 0.47
PRKN-204ENST00000366896 FBXO41Q8TF61 875 aa18■□□□□ 0.47
PRKN-204ENST00000366896 ZNF445P59923 1031 aa17.99■□□□□ 0.47
PRKN-204ENST00000366896 HMMRO75330 724 aa17.99■□□□□ 0.47
PRKN-204ENST00000366896 MSNP26038 577 aaKnown RBP17.99■□□□□ 0.47
PRKN-204ENST00000366896 NUCB2P80303 420 aa17.99■□□□□ 0.47
PRKN-204ENST00000366896 MTHFSDQ2M296 383 aaKnown RBP17.99■□□□□ 0.47
PRKN-204ENST00000366896 G2E3Q7L622 706 aa17.99■□□□□ 0.47
PRKN-204ENST00000366896 C8orf37Q96NL8 207 aa17.99■□□□□ 0.47
PRKN-204ENST00000366896 MEGF6O75095 1541 aa17.98■□□□□ 0.47
PRKN-204ENST00000366896 F6X3S4 739 aa17.98■□□□□ 0.47
PRKN-204ENST00000366896 HS1BP3Q53T59 392 aa17.98■□□□□ 0.47
PRKN-204ENST00000366896 CWC22Q9HCG8 908 aaKnown RBP17.98■□□□□ 0.47
PRKN-204ENST00000366896 CCT4P50991 539 aaKnown RBP17.97■□□□□ 0.47
PRKN-204ENST00000366896 NGLY1Q96IV0 654 aa17.97■□□□□ 0.47
PRKN-204ENST00000366896 CYP2E1P05181 493 aaPredicted RBP17.97■□□□□ 0.47
PRKN-204ENST00000366896 REC8O95072 547 aa17.96■□□□□ 0.47
PRKN-204ENST00000366896 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.47
PRKN-204ENST00000366896 RAPGEF4Q8WZA2 1011 aa17.96■□□□□ 0.47
PRKN-204ENST00000366896 SOS1Q07889 1333 aaPredicted RBP17.96■□□□□ 0.47
PRKN-204ENST00000366896 HTATSF1O43719 755 aaKnown RBP17.96■□□□□ 0.47
PRKN-204ENST00000366896 FNBP4Q8N3X1 1017 aaPredicted RBP17.96■□□□□ 0.47
PRKN-204ENST00000366896 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
PRKN-204ENST00000366896 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
PRKN-204ENST00000366896 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
PRKN-204ENST00000366896 TSPYL4Q9UJ04 414 aa17.95■□□□□ 0.46
PRKN-204ENST00000366896 PARP4Q9UKK3 1724 aaKnown RBP17.95■□□□□ 0.46
PRKN-204ENST00000366896 MEX3CQ5U5Q3 659 aaKnown RBP17.95■□□□□ 0.46
PRKN-204ENST00000366896 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
PRKN-204ENST00000366896 PLEKHO1Q53GL0 409 aaPredicted RBP17.94■□□□□ 0.46
PRKN-204ENST00000366896 UNC5CLQ8IV45 518 aa17.94■□□□□ 0.46
PRKN-204ENST00000366896 PKD1L3Q7Z443 1732 aa17.94■□□□□ 0.46
PRKN-204ENST00000366896 PKP1Q13835 747 aa17.94■□□□□ 0.46
PRKN-204ENST00000366896 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.93■□□□□ 0.46
PRKN-204ENST00000366896 OVOS2A0A0G2JMS6 1433 aa17.93■□□□□ 0.46
PRKN-204ENST00000366896 ST18O60284 1047 aa17.93■□□□□ 0.46
PRKN-204ENST00000366896 PDLIM2Q96JY6 352 aa17.93■□□□□ 0.46
PRKN-204ENST00000366896 ZSCAN23Q3MJ62 389 aa17.93■□□□□ 0.46
PRKN-204ENST00000366896 NOL7Q9UMY1 257 aaKnown RBP17.93■□□□□ 0.46
PRKN-204ENST00000366896 WNK3Q9BYP7 1800 aa17.92■□□□□ 0.46
PRKN-204ENST00000366896 ZNF500O60304 480 aaPredicted RBP17.92■□□□□ 0.46
PRKN-204ENST00000366896 RTF1Q92541 710 aaKnown RBP17.92■□□□□ 0.46
PRKN-204ENST00000366896 LMBRD1Q9NUN5 540 aa17.92■□□□□ 0.46
PRKN-204ENST00000366896 ERC2O15083 957 aa17.92■□□□□ 0.46
PRKN-204ENST00000366896 IL2RBP14784 551 aa17.92■□□□□ 0.46
PRKN-204ENST00000366896 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
PRKN-204ENST00000366896 MCTP1Q6DN14 999 aa17.92■□□□□ 0.46
PRKN-204ENST00000366896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
PRKN-204ENST00000366896 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
PRKN-204ENST00000366896 SPATA31A5Q5VU36 1347 aa17.91■□□□□ 0.46
PRKN-204ENST00000366896 SPATA31A7Q8IWB4 1347 aa17.91■□□□□ 0.46
PRKN-204ENST00000366896 DISP2A7MBM2 1401 aa17.91■□□□□ 0.46
PRKN-204ENST00000366896 LRRC37A3O60309 1634 aa17.91■□□□□ 0.46
PRKN-204ENST00000366896 CAVIN1Q6NZI2 390 aaKnown RBP17.91■□□□□ 0.46
PRKN-204ENST00000366896 ZNF530Q6P9A1 599 aaPredicted RBP17.91■□□□□ 0.46
PRKN-204ENST00000366896 ZGPATQ8N5A5 531 aaKnown RBP17.91■□□□□ 0.46
PRKN-204ENST00000366896 BABAM1Q9NWV8 329 aa17.91■□□□□ 0.46
PRKN-204ENST00000366896 USP21Q9UK80 565 aa17.91■□□□□ 0.46
PRKN-204ENST00000366896 MAP3K5Q99683 1374 aa17.91■□□□□ 0.46
PRKN-204ENST00000366896 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
PRKN-204ENST00000366896 PDE1AP54750 535 aa17.9■□□□□ 0.46
PRKN-204ENST00000366896 EXOC6BQ9Y2D4 811 aa17.9■□□□□ 0.46
PRKN-204ENST00000366896 SALL3Q9BXA9 1300 aa17.9■□□□□ 0.46
PRKN-204ENST00000366896 RBSNQ9H1K0 784 aa17.9■□□□□ 0.46
PRKN-204ENST00000366896 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.9■□□□□ 0.46
PRKN-204ENST00000366896 AFF2P51816 1311 aa17.89■□□□□ 0.45
PRKN-204ENST00000366896 GNAI2P04899 355 aa17.89■□□□□ 0.45
PRKN-204ENST00000366896 VPS72Q15906 364 aa17.89■□□□□ 0.45
PRKN-204ENST00000366896 IL17RAQ96F46 866 aa17.89■□□□□ 0.45
PRKN-204ENST00000366896 MAP7D2Q96T17 732 aa17.89■□□□□ 0.45
PRKN-204ENST00000366896 SPG7Q9UQ90 795 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms