RNA–Protein interactions for RNA: ENST00000366888.6

PACRG-202, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-202ENST00000366888 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
PACRG-202ENST00000366888 LGR6Q9HBX8 967 aa10.94□□□□□ -0.66
PACRG-202ENST00000366888 KDM2BQ8NHM5 1336 aa10.94□□□□□ -0.66
PACRG-202ENST00000366888 COL11A2P13942 1736 aaPredicted RBP10.94□□□□□ -0.66
PACRG-202ENST00000366888 MRC1P22897 1456 aa10.93□□□□□ -0.66
PACRG-202ENST00000366888 TM4SF1P30408 202 aa10.93□□□□□ -0.66
PACRG-202ENST00000366888 IL13P35225 146 aa10.93□□□□□ -0.66
PACRG-202ENST00000366888 EIF4G2P78344 907 aaKnown RBP eCLIP10.93□□□□□ -0.66
PACRG-202ENST00000366888 DICER1Q9UPY3 1922 aaKnown RBP10.93□□□□□ -0.66
PACRG-202ENST00000366888 SOS1Q07889 1333 aaPredicted RBP10.93□□□□□ -0.66
PACRG-202ENST00000366888 ZPR1O75312 459 aa10.92□□□□□ -0.66
PACRG-202ENST00000366888 HMOX1P09601 288 aa10.92□□□□□ -0.66
PACRG-202ENST00000366888 KLRG1Q96E93 195 aa10.92□□□□□ -0.66
PACRG-202ENST00000366888 COL15A1P39059 1388 aa10.92□□□□□ -0.66
PACRG-202ENST00000366888 CARMIL3Q8ND23 1372 aa10.92□□□□□ -0.66
PACRG-202ENST00000366888 SCN7AQ01118 1682 aa10.92□□□□□ -0.66
PACRG-202ENST00000366888 SIPA1L3O60292 1781 aaPredicted RBP10.92□□□□□ -0.66
PACRG-202ENST00000366888 FER1L6Q2WGJ9 1857 aa10.91□□□□□ -0.66
PACRG-202ENST00000366888 CYP19A1P11511 503 aaPredicted RBP10.91□□□□□ -0.66
PACRG-202ENST00000366888 PRELPP51888 382 aa10.91□□□□□ -0.66
PACRG-202ENST00000366888 NFIXQ14938 502 aa10.91□□□□□ -0.66
PACRG-202ENST00000366888 SLC52A2Q9HAB3 445 aa10.91□□□□□ -0.66
PACRG-202ENST00000366888 TIMELESSQ9UNS1 1208 aa10.91□□□□□ -0.66
PACRG-202ENST00000366888 ZBTB1Q9Y2K1 713 aa10.91□□□□□ -0.66
PACRG-202ENST00000366888 PCNTO95613 3336 aa10.91□□□□□ -0.66
PACRG-202ENST00000366888 RNMTO43148 476 aaKnown RBP10.9□□□□□ -0.66
PACRG-202ENST00000366888 FSTL1Q12841 308 aa10.9□□□□□ -0.66
PACRG-202ENST00000366888 AKAP4Q5JQC9 854 aa10.9□□□□□ -0.66
PACRG-202ENST00000366888 COL13A1Q5TAT6 717 aaPredicted RBP10.9□□□□□ -0.66
PACRG-202ENST00000366888 BCL2L12Q9HB09 334 aa10.9□□□□□ -0.66
PACRG-202ENST00000366888 CAPN15O75808 1086 aa10.9□□□□□ -0.67
PACRG-202ENST00000366888 CANXP27824 592 aaKnown RBP10.9□□□□□ -0.67
PACRG-202ENST00000366888 NARFQ9UHQ1 456 aa10.9□□□□□ -0.67
PACRG-202ENST00000366888 KNSTRNQ9Y448 316 aa10.9□□□□□ -0.67
PACRG-202ENST00000366888 SERPINB2P05120 415 aa10.89□□□□□ -0.67
PACRG-202ENST00000366888 BICDL1Q6ZP65 573 aa10.89□□□□□ -0.67
PACRG-202ENST00000366888 C2CD5Q86YS7 1000 aa10.89□□□□□ -0.67
PACRG-202ENST00000366888 JMYQ8N9B5 988 aa10.89□□□□□ -0.67
PACRG-202ENST00000366888 LMNB1P20700 586 aa10.88□□□□□ -0.67
PACRG-202ENST00000366888 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
PACRG-202ENST00000366888 BCORQ6W2J9 1755 aa10.88□□□□□ -0.67
PACRG-202ENST00000366888 SLX4Q8IY92 1834 aa10.88□□□□□ -0.67
PACRG-202ENST00000366888 CCDC24Q8N4L8 307 aa10.88□□□□□ -0.67
PACRG-202ENST00000366888 SMC1BQ8NDV3 1235 aa10.88□□□□□ -0.67
PACRG-202ENST00000366888 ZNF219Q9P2Y4 722 aaPredicted RBP10.88□□□□□ -0.67
PACRG-202ENST00000366888 ARFGEF2Q9Y6D5 1785 aa10.88□□□□□ -0.67
PACRG-202ENST00000366888 NFKBIEO00221 500 aa10.87□□□□□ -0.67
PACRG-202ENST00000366888 AMER1Q5JTC6 1135 aaPredicted RBP10.87□□□□□ -0.67
PACRG-202ENST00000366888 TTLL6Q8N841 843 aa10.87□□□□□ -0.67
PACRG-202ENST00000366888 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
PACRG-202ENST00000366888 GLTPD2A6NH11 291 aa10.86□□□□□ -0.67
PACRG-202ENST00000366888 CNGB1Q14028 1251 aaPredicted RBP10.86□□□□□ -0.67
PACRG-202ENST00000366888 ZNF330Q9Y3S2 320 aaPredicted RBP10.86□□□□□ -0.67
PACRG-202ENST00000366888 ZC3H4Q9UPT8 1303 aaKnown RBP10.85□□□□□ -0.67
PACRG-202ENST00000366888 H0YIN7 160 aa10.85□□□□□ -0.67
PACRG-202ENST00000366888 VEGFAP15692 232 aaPredicted RBP10.85□□□□□ -0.67
PACRG-202ENST00000366888 TBC1D9BQ66K14 1250 aa10.85□□□□□ -0.67
PACRG-202ENST00000366888 POTECB2RU33 542 aa10.84□□□□□ -0.67
PACRG-202ENST00000366888 C21orf2O43822 256 aa10.84□□□□□ -0.67
PACRG-202ENST00000366888 CC2D1BQ5T0F9 858 aaKnown RBP10.84□□□□□ -0.67
PACRG-202ENST00000366888 TNS4Q8IZW8 715 aa10.84□□□□□ -0.67
PACRG-202ENST00000366888 ZNF622Q969S3 477 aaKnown RBP eCLIP10.84□□□□□ -0.67
PACRG-202ENST00000366888 TBC1D2BQ9UPU7 963 aa10.84□□□□□ -0.67
PACRG-202ENST00000366888 COL3A1P02461 1466 aaPredicted RBP10.84□□□□□ -0.67
PACRG-202ENST00000366888 KIF7Q2M1P5 1343 aa10.83□□□□□ -0.68
PACRG-202ENST00000366888 DIAPH1O60610 1272 aaKnown RBP10.83□□□□□ -0.68
PACRG-202ENST00000366888 HSPA1AP0DMV8 641 aaKnown RBP10.83□□□□□ -0.68
PACRG-202ENST00000366888 HSPA1BP0DMV9 641 aaKnown RBP10.83□□□□□ -0.68
PACRG-202ENST00000366888 EIF5P55010 431 aaKnown RBP10.83□□□□□ -0.68
PACRG-202ENST00000366888 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
PACRG-202ENST00000366888 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
PACRG-202ENST00000366888 ZNF496Q96IT1 587 aaPredicted RBP10.83□□□□□ -0.68
PACRG-202ENST00000366888 HEG1Q9ULI3 1381 aa10.83□□□□□ -0.68
PACRG-202ENST00000366888 U2SURPO15042 1029 aaKnown RBP10.82□□□□□ -0.68
PACRG-202ENST00000366888 STARD3NLO95772 234 aa10.82□□□□□ -0.68
PACRG-202ENST00000366888 PRR5LQ6MZQ0 368 aa10.82□□□□□ -0.68
PACRG-202ENST00000366888 A1BGP04217 495 aa10.81□□□□□ -0.68
PACRG-202ENST00000366888 PIP4K2AP48426 406 aaPredicted RBP10.81□□□□□ -0.68
PACRG-202ENST00000366888 TEFQ10587 303 aa10.81□□□□□ -0.68
PACRG-202ENST00000366888 ERFEQ4G0M1 354 aa10.81□□□□□ -0.68
PACRG-202ENST00000366888 IL17REQ8NFR9 667 aa10.81□□□□□ -0.68
PACRG-202ENST00000366888 A0A087WZG4 1122 aa10.8□□□□□ -0.68
PACRG-202ENST00000366888 KCNQ3O43525 872 aa10.8□□□□□ -0.68
PACRG-202ENST00000366888 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
PACRG-202ENST00000366888 POTEJP0CG39 1038 aa10.8□□□□□ -0.68
PACRG-202ENST00000366888 PDE6BP35913 854 aa10.8□□□□□ -0.68
PACRG-202ENST00000366888 DPY19L2Q6NUT2 758 aa10.8□□□□□ -0.68
PACRG-202ENST00000366888 ZNF790Q6PG37 636 aa10.8□□□□□ -0.68
PACRG-202ENST00000366888 SCN4AP35499 1836 aa10.8□□□□□ -0.68
PACRG-202ENST00000366888 GNAT3A8MTJ3 354 aa10.79□□□□□ -0.68
PACRG-202ENST00000366888 NPHP1O15259 732 aa10.79□□□□□ -0.68
PACRG-202ENST00000366888 PER1O15534 1290 aaPredicted RBP10.79□□□□□ -0.68
PACRG-202ENST00000366888 DDNO94850 711 aaPredicted RBP10.79□□□□□ -0.68
PACRG-202ENST00000366888 CACNB1Q02641 598 aaPredicted RBP10.79□□□□□ -0.68
PACRG-202ENST00000366888 CCER1Q8TC90 406 aaPredicted RBP10.79□□□□□ -0.68
PACRG-202ENST00000366888 BRIP1Q9BX63 1249 aa10.79□□□□□ -0.68
PACRG-202ENST00000366888 MKRN1Q9UHC7 482 aaKnown RBP10.79□□□□□ -0.68
PACRG-202ENST00000366888 CAMTA2O94983 1202 aa10.78□□□□□ -0.68
PACRG-202ENST00000366888 IL6STP40189 918 aaPredicted RBP10.78□□□□□ -0.68
PACRG-202ENST00000366888 PRPF40BQ6NWY9 871 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms