RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 TSC1Q92574 1164 aa19.73■□□□□ 0.75
IFT140-201ENST00000361339 TRIM6-TRIM34B2RNG4 842 aa19.73■□□□□ 0.75
IFT140-201ENST00000361339 EIF4A1P60842 406 aaKnown RBP19.73■□□□□ 0.75
IFT140-201ENST00000361339 PALD1Q9ULE6 856 aa19.73■□□□□ 0.75
IFT140-201ENST00000361339 AXIN2Q9Y2T1 843 aa19.73■□□□□ 0.75
IFT140-201ENST00000361339 LTN1O94822 1766 aa19.73■□□□□ 0.75
IFT140-201ENST00000361339 ZNF530Q6P9A1 599 aaPredicted RBP19.72■□□□□ 0.75
IFT140-201ENST00000361339 MX1P20591 662 aa19.72■□□□□ 0.75
IFT140-201ENST00000361339 PRIM1P49642 420 aaKnown RBP19.72■□□□□ 0.75
IFT140-201ENST00000361339 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
IFT140-201ENST00000361339 PI4KAP2A4QPH2 592 aa19.71■□□□□ 0.75
IFT140-201ENST00000361339 UBTFL1P0CB47 393 aaPredicted RBP19.71■□□□□ 0.75
IFT140-201ENST00000361339 RABEP1Q15276 862 aa19.71■□□□□ 0.75
IFT140-201ENST00000361339 PROSER3Q2NL68 480 aa19.71■□□□□ 0.75
IFT140-201ENST00000361339 PI4KAP1Q8N8J0 262 aa19.71■□□□□ 0.75
IFT140-201ENST00000361339 PRPF40AO75400 957 aaKnown RBP19.71■□□□□ 0.75
IFT140-201ENST00000361339 GNAI3P08754 354 aa19.71■□□□□ 0.75
IFT140-201ENST00000361339 PPP1R42Q7Z4L9 355 aa19.71■□□□□ 0.75
IFT140-201ENST00000361339 PXDNQ92626 1479 aa19.7■□□□□ 0.74
IFT140-201ENST00000361339 ERC2O15083 957 aa19.7■□□□□ 0.74
IFT140-201ENST00000361339 CIZ1Q9ULV3 898 aaPredicted RBP19.7■□□□□ 0.74
IFT140-201ENST00000361339 IBTKQ9P2D0 1353 aaPredicted RBP19.7■□□□□ 0.74
IFT140-201ENST00000361339 GCP02774 474 aa19.7■□□□□ 0.74
IFT140-201ENST00000361339 ZSCAN23Q3MJ62 389 aa19.7■□□□□ 0.74
IFT140-201ENST00000361339 DNTTIP2Q5QJE6 756 aaKnown RBP19.7■□□□□ 0.74
IFT140-201ENST00000361339 NFAT5O94916 1531 aa19.7■□□□□ 0.74
IFT140-201ENST00000361339 FAM177BA6PVY3 158 aa19.69■□□□□ 0.74
IFT140-201ENST00000361339 FOXD4L6Q3SYB3 417 aaPredicted RBP19.69■□□□□ 0.74
IFT140-201ENST00000361339 FOXD4L3Q6VB84 417 aaPredicted RBP19.69■□□□□ 0.74
IFT140-201ENST00000361339 CEMIPQ8WUJ3 1361 aa19.69■□□□□ 0.74
IFT140-201ENST00000361339 OSBPL3Q9H4L5 887 aa19.69■□□□□ 0.74
IFT140-201ENST00000361339 KLHL40Q2TBA0 621 aa19.68■□□□□ 0.74
IFT140-201ENST00000361339 BTBD11A6QL63 1104 aa19.68■□□□□ 0.74
IFT140-201ENST00000361339 SURF6O75683 361 aaKnown RBP19.68■□□□□ 0.74
IFT140-201ENST00000361339 CASC1Q6TDU7 716 aa19.68■□□□□ 0.74
IFT140-201ENST00000361339 SOS1Q07889 1333 aaPredicted RBP19.68■□□□□ 0.74
IFT140-201ENST00000361339 TEFQ10587 303 aa19.67■□□□□ 0.74
IFT140-201ENST00000361339 PTMAP06454 111 aaKnown RBP19.67■□□□□ 0.74
IFT140-201ENST00000361339 ZC3H6P61129 1189 aaKnown RBP19.67■□□□□ 0.74
IFT140-201ENST00000361339 ESYT1Q9BSJ8 1104 aa19.67■□□□□ 0.74
IFT140-201ENST00000361339 ANO2Q9NQ90 1003 aa19.67■□□□□ 0.74
IFT140-201ENST00000361339 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.67■□□□□ 0.74
IFT140-201ENST00000361339 SRGAP3O43295 1099 aa19.66■□□□□ 0.74
IFT140-201ENST00000361339 DTNBO60941 627 aa19.66■□□□□ 0.74
IFT140-201ENST00000361339 SRCIN1Q9C0H9 1055 aa19.66■□□□□ 0.74
IFT140-201ENST00000361339 CHD2O14647 1828 aaKnown RBP19.66■□□□□ 0.74
IFT140-201ENST00000361339 CHMLP26374 656 aa19.65■□□□□ 0.74
IFT140-201ENST00000361339 NEK4P51957 841 aa19.65■□□□□ 0.74
IFT140-201ENST00000361339 ANKRD24Q8TF21 1146 aa19.65■□□□□ 0.74
IFT140-201ENST00000361339 SYCE3A1L190 88 aa19.65■□□□□ 0.74
IFT140-201ENST00000361339 REC8O95072 547 aa19.65■□□□□ 0.74
IFT140-201ENST00000361339 BEND3Q5T5X7 828 aa19.65■□□□□ 0.74
IFT140-201ENST00000361339 UPF3BQ9BZI7 483 aaKnown RBP19.65■□□□□ 0.74
IFT140-201ENST00000361339 ARHGEF25Q86VW2 580 aa19.64■□□□□ 0.73
IFT140-201ENST00000361339 CWF19L2Q2TBE0 894 aaKnown RBP19.64■□□□□ 0.73
IFT140-201ENST00000361339 SSH3Q8TE77 659 aa19.64■□□□□ 0.73
IFT140-201ENST00000361339 ADGRL3Q9HAR2 1447 aa19.64■□□□□ 0.73
IFT140-201ENST00000361339 DNAAF4Q8WXU2 420 aa19.63■□□□□ 0.73
IFT140-201ENST00000361339 NOL7Q9UMY1 257 aaKnown RBP19.63■□□□□ 0.73
IFT140-201ENST00000361339 ZDHHC9Q9Y397 364 aa19.63■□□□□ 0.73
IFT140-201ENST00000361339 ADCY9O60503 1353 aa19.63■□□□□ 0.73
IFT140-201ENST00000361339 RNMTO43148 476 aaKnown RBP19.62■□□□□ 0.73
IFT140-201ENST00000361339 SLC39A6Q13433 755 aa19.62■□□□□ 0.73
IFT140-201ENST00000361339 PA2G4Q9UQ80 394 aaKnown RBP19.62■□□□□ 0.73
IFT140-201ENST00000361339 ZNF830Q96NB3 372 aaPredicted RBP19.62■□□□□ 0.73
IFT140-201ENST00000361339 LARP6Q9BRS8 491 aaKnown RBP19.62■□□□□ 0.73
IFT140-201ENST00000361339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.62■□□□□ 0.73
IFT140-201ENST00000361339 AIMP1Q12904 312 aaKnown RBP19.62■□□□□ 0.73
IFT140-201ENST00000361339 AKAP4Q5JQC9 854 aa19.62■□□□□ 0.73
IFT140-201ENST00000361339 NSFL1CQ9UNZ2 370 aaKnown RBP19.62■□□□□ 0.73
IFT140-201ENST00000361339 PIP4K2AP48426 406 aaPredicted RBP19.61■□□□□ 0.73
IFT140-201ENST00000361339 RHPN1Q8TCX5 695 aa19.61■□□□□ 0.73
IFT140-201ENST00000361339 PTMSP20962 102 aa19.61■□□□□ 0.73
IFT140-201ENST00000361339 KCNH5Q8NCM2 988 aa19.61■□□□□ 0.73
IFT140-201ENST00000361339 LMBRD1Q9NUN5 540 aa19.61■□□□□ 0.73
IFT140-201ENST00000361339 ST18O60284 1047 aa19.6■□□□□ 0.73
IFT140-201ENST00000361339 CABLES1Q8TDN4 633 aa19.6■□□□□ 0.73
IFT140-201ENST00000361339 MAP3K2Q9Y2U5 619 aa19.6■□□□□ 0.73
IFT140-201ENST00000361339 CBX1P83916 185 aa19.6■□□□□ 0.73
IFT140-201ENST00000361339 PLEKHO1Q53GL0 409 aaPredicted RBP19.6■□□□□ 0.73
IFT140-201ENST00000361339 TMX3Q96JJ7 454 aa19.59■□□□□ 0.73
IFT140-201ENST00000361339 POLA2Q14181 598 aa19.59■□□□□ 0.73
IFT140-201ENST00000361339 C1orf141Q5JVX7 400 aa19.59■□□□□ 0.73
IFT140-201ENST00000361339 KRT28Q7Z3Y7 464 aa19.59■□□□□ 0.73
IFT140-201ENST00000361339 PI4K2BQ8TCG2 481 aa19.59■□□□□ 0.73
IFT140-201ENST00000361339 ZKSCAN5Q9Y2L8 839 aa19.59■□□□□ 0.73
IFT140-201ENST00000361339 USP54Q70EL1 1684 aa19.59■□□□□ 0.73
IFT140-201ENST00000361339 CYP2E1P05181 493 aaPredicted RBP19.59■□□□□ 0.73
IFT140-201ENST00000361339 GPT2Q8TD30 523 aa19.59■□□□□ 0.73
IFT140-201ENST00000361339 STAP2Q9UGK3 403 aa19.59■□□□□ 0.73
IFT140-201ENST00000361339 C17orf53Q8N3J3 647 aaPredicted RBP19.58■□□□□ 0.73
IFT140-201ENST00000361339 MAP7D2Q96T17 732 aa19.58■□□□□ 0.73
IFT140-201ENST00000361339 BABAM1Q9NWV8 329 aa19.58■□□□□ 0.73
IFT140-201ENST00000361339 GIGYF1O75420 1035 aaPredicted RBP19.58■□□□□ 0.72
IFT140-201ENST00000361339 PROSER2Q86WR7 435 aaPredicted RBP19.58■□□□□ 0.72
IFT140-201ENST00000361339 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
IFT140-201ENST00000361339 IGSF3O75054 1194 aa19.56■□□□□ 0.72
IFT140-201ENST00000361339 ZNF445P59923 1031 aa19.56■□□□□ 0.72
IFT140-201ENST00000361339 TMEM63CQ9P1W3 806 aa19.56■□□□□ 0.72
IFT140-201ENST00000361339 NPHP4O75161 1426 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms