RNA–Protein interactions for RNA: ENST00000361303.7

LDLRAD4-202, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,086 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-202ENST00000361303 CASTP20810 708 aaKnown RBP12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 KIF5BP33176 963 aa12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 KIAA1328Q86T90 577 aa12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 HMGN5P82970 282 aaKnown RBP12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 FKBP15Q5T1M5 1219 aa12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 CDCA7LQ96GN5 454 aa12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 PDE4BQ07343 736 aa12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 STXBP4Q6ZWJ1 553 aa12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 C16orf71Q8IYS4 520 aaPredicted RBP12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 SLC12A7Q9Y666 1083 aa12.55□□□□□ -0.4
LDLRAD4-202ENST00000361303 CETN1Q12798 172 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 CCDC112Q8NEF3 446 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 NSD2O96028 1365 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 FOXO3O43524 673 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 WAPLQ7Z5K2 1190 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 RANBP6O60518 1105 aaKnown RBP12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 LEKR1Q6ZMV7 388 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 HDAC9Q9UKV0 1011 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 ABCA10Q8WWZ4 1543 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 ZNF213O14771 459 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 EPB41L2O43491 1005 aaKnown RBP12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 ITSN2Q9NZM3 1697 aa12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 EIF3JO75822 258 aaKnown RBP12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 CALRP27797 417 aaKnown RBP12.54□□□□□ -0.4
LDLRAD4-202ENST00000361303 ZNF622Q969S3 477 aaKnown RBP eCLIP12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 NUP62CLQ9H1M0 184 aa12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 PTPRCP08575 1304 aa12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 MX1P20591 662 aa12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 CCDC91Q7Z6B0 441 aa12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 PYM1Q9BRP8 204 aaKnown RBP12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 PLEKHH1Q9ULM0 1364 aa12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 PLB1Q6P1J6 1458 aa12.53□□□□□ -0.4
LDLRAD4-202ENST00000361303 MCM10Q7L590 875 aa12.52□□□□□ -0.4
LDLRAD4-202ENST00000361303 FANCAO15360 1455 aa12.52□□□□□ -0.4
LDLRAD4-202ENST00000361303 GRIN2AQ12879 1464 aa12.52□□□□□ -0.4
LDLRAD4-202ENST00000361303 CCDC194A0A1B0GVG4 234 aa12.52□□□□□ -0.4
LDLRAD4-202ENST00000361303 NAIPQ13075 1403 aa12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 NCOA1Q15788 1441 aa12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 CCDC152Q4G0S7 254 aa12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 CCDC178Q5BJE1 867 aa12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 TSPYL1Q9H0U9 437 aa12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 PCF11O94913 1555 aaKnown RBP12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 PRXQ9BXM0 1461 aa12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 SPA17Q15506 151 aa12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 FERMT2Q96AC1 680 aa12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 SH2B1Q9NRF2 756 aaPredicted RBP12.52□□□□□ -0.41
LDLRAD4-202ENST00000361303 CCDC148Q8NFR7 591 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 AMPD3Q01432 767 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 SPC24Q8NBT2 197 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 NF2P35240 595 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 NFKBIBQ15653 356 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 NBPF6Q5VWK0 638 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 NBPF5PQ86XG9 351 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 NBPF4Q96M43 638 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 B4DLN1 442 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 MRPL12P52815 198 aaKnown RBP12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 NUTM1Q86Y26 1132 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 FERMT1Q9BQL6 677 aa12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD4-202ENST00000361303 POLD1P28340 1107 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 CALML4Q96GE6 196 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 C8orf76Q96K31 380 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 UBAP1LF5GYI3 381 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 LRRC27Q9C0I9 530 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 TNRQ92752 1358 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 CACNA2D4Q7Z3S7 1137 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 UBA5Q9GZZ9 404 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 KIAA0754O94854 1291 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 NLRP5P59047 1200 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 OGFOD1Q8N543 542 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
LDLRAD4-202ENST00000361303 TAX1BP1Q86VP1 789 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 CRNKL1Q9BZJ0 848 aaKnown RBP12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 NBPF8Q3BBV2 869 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 NPHP3Q7Z494 1330 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 IFIT3O14879 490 aaKnown RBP12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 KAT14Q9H8E8 782 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 ARHGAP29Q52LW3 1261 aa12.49□□□□□ -0.41
LDLRAD4-202ENST00000361303 MAP3K11Q16584 847 aa12.48□□□□□ -0.41
LDLRAD4-202ENST00000361303 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms