RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 ADCY9O60503 1353 aa22.62■■□□□ 1.21
PDLIM7-203ENST00000359895 NHSL1Q5SYE7 1610 aa22.62■■□□□ 1.21
PDLIM7-203ENST00000359895 TUBGCP6Q96RT7 1819 aa22.62■■□□□ 1.21
PDLIM7-203ENST00000359895 APBB1O00213 710 aa22.62■■□□□ 1.21
PDLIM7-203ENST00000359895 DCAF5Q96JK2 942 aa22.62■■□□□ 1.21
PDLIM7-203ENST00000359895 HDAC5Q9UQL6 1122 aa22.62■■□□□ 1.21
PDLIM7-203ENST00000359895 IBTKQ9P2D0 1353 aaPredicted RBP22.62■■□□□ 1.21
PDLIM7-203ENST00000359895 ZNF790Q6PG37 636 aa22.61■■□□□ 1.21
PDLIM7-203ENST00000359895 CASC1Q6TDU7 716 aa22.61■■□□□ 1.21
PDLIM7-203ENST00000359895 SSH3Q8TE77 659 aa22.61■■□□□ 1.21
PDLIM7-203ENST00000359895 PNMA6EA0A0J9YXQ4 647 aa22.6■■□□□ 1.21
PDLIM7-203ENST00000359895 ALDH1L1O75891 902 aa22.6■■□□□ 1.21
PDLIM7-203ENST00000359895 KSR2Q6VAB6 950 aa22.6■■□□□ 1.21
PDLIM7-203ENST00000359895 DDX58O95786 925 aaKnown RBP22.59■■□□□ 1.21
PDLIM7-203ENST00000359895 OTUD7AQ8TE49 926 aaPredicted RBP22.59■■□□□ 1.21
PDLIM7-203ENST00000359895 DDX21Q9NR30 783 aaKnown RBP eCLIP22.59■■□□□ 1.21
PDLIM7-203ENST00000359895 EXOC6BQ9Y2D4 811 aa22.59■■□□□ 1.21
PDLIM7-203ENST00000359895 PRDM11Q9NQV5 511 aa22.59■■□□□ 1.21
PDLIM7-203ENST00000359895 WDR17Q8IZU2 1322 aa22.58■■□□□ 1.21
PDLIM7-203ENST00000359895 RAB11FIP3O75154 756 aa22.58■■□□□ 1.2
PDLIM7-203ENST00000359895 NFKBIBQ15653 356 aa22.58■■□□□ 1.2
PDLIM7-203ENST00000359895 ANXA1P04083 346 aa22.57■■□□□ 1.2
PDLIM7-203ENST00000359895 PDE1AP54750 535 aa22.57■■□□□ 1.2
PDLIM7-203ENST00000359895 POLA2Q14181 598 aa22.57■■□□□ 1.2
PDLIM7-203ENST00000359895 HSCBQ8IWL3 235 aa22.57■■□□□ 1.2
PDLIM7-203ENST00000359895 SNX21Q969T3 373 aa22.57■■□□□ 1.2
PDLIM7-203ENST00000359895 LAMB4A4D0S4 1761 aa22.57■■□□□ 1.2
PDLIM7-203ENST00000359895 PHLPP1O60346 1717 aa22.56■■□□□ 1.2
PDLIM7-203ENST00000359895 SDSP20132 328 aa22.56■■□□□ 1.2
PDLIM7-203ENST00000359895 NFATC2IPQ8NCF5 419 aa22.56■■□□□ 1.2
PDLIM7-203ENST00000359895 MAP3K2Q9Y2U5 619 aa22.56■■□□□ 1.2
PDLIM7-203ENST00000359895 SALL3Q9BXA9 1300 aa22.56■■□□□ 1.2
PDLIM7-203ENST00000359895 CYP27B1O15528 508 aa22.55■■□□□ 1.2
PDLIM7-203ENST00000359895 COL5A2P05997 1499 aaPredicted RBP22.55■■□□□ 1.2
PDLIM7-203ENST00000359895 HSPA1LP34931 641 aa22.55■■□□□ 1.2
PDLIM7-203ENST00000359895 PPP1R42Q7Z4L9 355 aa22.55■■□□□ 1.2
PDLIM7-203ENST00000359895 AOX1Q06278 1338 aa22.54■■□□□ 1.2
PDLIM7-203ENST00000359895 PROSER3Q2NL68 480 aa22.54■■□□□ 1.2
PDLIM7-203ENST00000359895 HSP90AB4PQ58FF6 505 aa22.54■■□□□ 1.2
PDLIM7-203ENST00000359895 TTC5Q8N0Z6 440 aa22.54■■□□□ 1.2
PDLIM7-203ENST00000359895 BCL11AQ9H165 835 aa22.54■■□□□ 1.2
PDLIM7-203ENST00000359895 AHDC1Q5TGY3 1603 aaPredicted RBP22.53■■□□□ 1.2
PDLIM7-203ENST00000359895 PRAMEF22A3QJZ6 481 aa22.53■■□□□ 1.2
PDLIM7-203ENST00000359895 NBPF7P0C2Y1 421 aaPredicted RBP22.53■■□□□ 1.2
PDLIM7-203ENST00000359895 SLC39A6Q13433 755 aa22.53■■□□□ 1.2
PDLIM7-203ENST00000359895 STAP2Q9UGK3 403 aa22.53■■□□□ 1.2
PDLIM7-203ENST00000359895 MX1P20591 662 aa22.52■■□□□ 1.2
PDLIM7-203ENST00000359895 TOM1L2Q6ZVM7 507 aa22.52■■□□□ 1.2
PDLIM7-203ENST00000359895 LINS1Q8NG48 757 aa22.52■■□□□ 1.2
PDLIM7-203ENST00000359895 ANTXR1Q9H6X2 564 aa22.52■■□□□ 1.2
PDLIM7-203ENST00000359895 PCDH11XQ9BZA7 1347 aa22.52■■□□□ 1.2
PDLIM7-203ENST00000359895 PCDH11YQ9BZA8 1340 aa22.52■■□□□ 1.2
PDLIM7-203ENST00000359895 AK9Q5TCS8 1911 aa22.51■■□□□ 1.19
PDLIM7-203ENST00000359895 SNRPA1P09661 255 aaKnown RBP22.51■■□□□ 1.19
PDLIM7-203ENST00000359895 CABP4P57796 275 aa22.51■■□□□ 1.19
PDLIM7-203ENST00000359895 MTX1Q13505 466 aa22.51■■□□□ 1.19
PDLIM7-203ENST00000359895 PDIA6Q15084 440 aa22.51■■□□□ 1.19
PDLIM7-203ENST00000359895 FMNL2Q96PY5 1086 aa22.51■■□□□ 1.19
PDLIM7-203ENST00000359895 C9orf78Q9NZ63 289 aaPredicted RBP22.51■■□□□ 1.19
PDLIM7-203ENST00000359895 SRGAP3O43295 1099 aa22.5■■□□□ 1.19
PDLIM7-203ENST00000359895 COL16A1Q07092 1604 aaPredicted RBP22.5■■□□□ 1.19
PDLIM7-203ENST00000359895 SURF6O75683 361 aaKnown RBP22.5■■□□□ 1.19
PDLIM7-203ENST00000359895 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
PDLIM7-203ENST00000359895 ZNF496Q96IT1 587 aaPredicted RBP22.5■■□□□ 1.19
PDLIM7-203ENST00000359895 CARD10Q9BWT7 1032 aa22.5■■□□□ 1.19
PDLIM7-203ENST00000359895 SLKQ9H2G2 1235 aaPredicted RBP22.5■■□□□ 1.19
PDLIM7-203ENST00000359895 UBR2Q8IWV8 1755 aa22.49■■□□□ 1.19
PDLIM7-203ENST00000359895 SHANK3Q9BYB0 1731 aa22.49■■□□□ 1.19
PDLIM7-203ENST00000359895 REC8O95072 547 aa22.49■■□□□ 1.19
PDLIM7-203ENST00000359895 LARP1Q6PKG0 1096 aaKnown RBP22.49■■□□□ 1.19
PDLIM7-203ENST00000359895 KIF1BPQ96EK5 621 aa22.49■■□□□ 1.19
PDLIM7-203ENST00000359895 KIF2CQ99661 725 aa22.49■■□□□ 1.19
PDLIM7-203ENST00000359895 UTYO14607 1347 aa22.48■■□□□ 1.19
PDLIM7-203ENST00000359895 USP26Q9BXU7 913 aa22.47■■□□□ 1.19
PDLIM7-203ENST00000359895 PAPPAQ13219 1627 aa22.47■■□□□ 1.19
PDLIM7-203ENST00000359895 GLI3P10071 1580 aa22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 NEXNQ0ZGT2 675 aa22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 RIC3Q7Z5B4 369 aa22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 RHPN1Q8TCX5 695 aa22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 AFDNP55196 1824 aaKnown RBP22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 ERVV-2B6SEH9 535 aa22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 GRM8O00222 908 aa22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 ERC2O15083 957 aa22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 IL2RBP14784 551 aa22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 DEKP35659 375 aaKnown RBP22.46■■□□□ 1.19
PDLIM7-203ENST00000359895 ARFGEF2Q9Y6D5 1785 aa22.45■■□□□ 1.18
PDLIM7-203ENST00000359895 AIMP1Q12904 312 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-203ENST00000359895 NKX1-1Q15270 411 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-203ENST00000359895 RABEP1Q15276 862 aa22.45■■□□□ 1.18
PDLIM7-203ENST00000359895 ERBB4Q15303 1308 aa22.44■■□□□ 1.18
PDLIM7-203ENST00000359895 CHMP5Q9NZZ3 219 aa22.44■■□□□ 1.18
PDLIM7-203ENST00000359895 EVA1CP58658 441 aa22.43■■□□□ 1.18
PDLIM7-203ENST00000359895 CWF19L2Q2TBE0 894 aaKnown RBP22.43■■□□□ 1.18
PDLIM7-203ENST00000359895 ERC1Q8IUD2 1116 aa22.43■■□□□ 1.18
PDLIM7-203ENST00000359895 XAGE3Q8WTP9 111 aa22.43■■□□□ 1.18
PDLIM7-203ENST00000359895 MYL6BP14649 208 aa22.42■■□□□ 1.18
PDLIM7-203ENST00000359895 METTL22Q9BUU2 404 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-203ENST00000359895 FRAT2O75474 233 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-203ENST00000359895 COPS6Q7L5N1 327 aa22.42■■□□□ 1.18
PDLIM7-203ENST00000359895 IL1RAPL2Q9NP60 686 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms