RNA–Protein interactions for RNA: ENST00000359632.7

HPS1-203, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 978 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-203ENST00000359632 DDR1Q08345 913 aa17.75■□□□□ 0.43
HPS1-203ENST00000359632 IFNL2Q8IZJ0 200 aa17.75■□□□□ 0.43
HPS1-203ENST00000359632 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
HPS1-203ENST00000359632 RPS6KA4O75676 772 aa17.74■□□□□ 0.43
HPS1-203ENST00000359632 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
HPS1-203ENST00000359632 SLC4A9Q96Q91 983 aa17.74■□□□□ 0.43
HPS1-203ENST00000359632 CNTNAP4Q9C0A0 1308 aa17.73■□□□□ 0.43
HPS1-203ENST00000359632 RC3H1Q5TC82 1133 aaKnown RBP17.73■□□□□ 0.43
HPS1-203ENST00000359632 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
HPS1-203ENST00000359632 SRP68Q9UHB9 627 aaKnown RBP17.73■□□□□ 0.43
HPS1-203ENST00000359632 CCDC85CA6NKD9 419 aa17.72■□□□□ 0.43
HPS1-203ENST00000359632 FKBP8Q14318 412 aa17.72■□□□□ 0.43
HPS1-203ENST00000359632 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
HPS1-203ENST00000359632 POTEIP0CG38 1075 aa17.71■□□□□ 0.43
HPS1-203ENST00000359632 POTEJP0CG39 1038 aa17.71■□□□□ 0.43
HPS1-203ENST00000359632 VEGFBP49765 207 aa17.71■□□□□ 0.43
HPS1-203ENST00000359632 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
HPS1-203ENST00000359632 DPY19L2Q6NUT2 758 aa17.71■□□□□ 0.43
HPS1-203ENST00000359632 WBP1LQ9NX94 342 aa17.71■□□□□ 0.43
HPS1-203ENST00000359632 ZNF530Q6P9A1 599 aaPredicted RBP17.7■□□□□ 0.42
HPS1-203ENST00000359632 COL5A3P25940 1745 aaPredicted RBP17.69■□□□□ 0.42
HPS1-203ENST00000359632 HSPA8P11142 646 aaKnown RBP17.69■□□□□ 0.42
HPS1-203ENST00000359632 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
HPS1-203ENST00000359632 POLRMTO00411 1230 aaKnown RBP17.68■□□□□ 0.42
HPS1-203ENST00000359632 HMOX1P09601 288 aa17.68■□□□□ 0.42
HPS1-203ENST00000359632 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
HPS1-203ENST00000359632 MYH14Q7Z406 1995 aaKnown RBP17.68■□□□□ 0.42
HPS1-203ENST00000359632 NFKBIEO00221 500 aa17.67■□□□□ 0.42
HPS1-203ENST00000359632 RGS19P49795 217 aa17.67■□□□□ 0.42
HPS1-203ENST00000359632 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
HPS1-203ENST00000359632 AMOTQ4VCS5 1084 aa17.66■□□□□ 0.42
HPS1-203ENST00000359632 ZNF831Q5JPB2 1677 aa17.66■□□□□ 0.42
HPS1-203ENST00000359632 ERVV-2B6SEH9 535 aa17.65■□□□□ 0.42
HPS1-203ENST00000359632 TTLL6Q8N841 843 aa17.65■□□□□ 0.42
HPS1-203ENST00000359632 PASKQ96RG2 1323 aa17.65■□□□□ 0.42
HPS1-203ENST00000359632 TMEM88BA6NKF7 163 aa17.64■□□□□ 0.41
HPS1-203ENST00000359632 CRKLP46109 303 aaKnown RBP17.64■□□□□ 0.41
HPS1-203ENST00000359632 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
HPS1-203ENST00000359632 CABP4P57796 275 aa17.63■□□□□ 0.41
HPS1-203ENST00000359632 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
HPS1-203ENST00000359632 C1orf141Q5JVX7 400 aa17.63■□□□□ 0.41
HPS1-203ENST00000359632 NFATC2IPQ8NCF5 419 aa17.63■□□□□ 0.41
HPS1-203ENST00000359632 CFAP44Q96MT7 982 aa17.63■□□□□ 0.41
HPS1-203ENST00000359632 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
HPS1-203ENST00000359632 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
HPS1-203ENST00000359632 TM4SF1P30408 202 aa17.62■□□□□ 0.41
HPS1-203ENST00000359632 NPC1L1Q9UHC9 1359 aa17.62■□□□□ 0.41
HPS1-203ENST00000359632 COL3A1P02461 1466 aaPredicted RBP17.62■□□□□ 0.41
HPS1-203ENST00000359632 PTCD1O75127 700 aaKnown RBP17.61■□□□□ 0.41
HPS1-203ENST00000359632 DDNO94850 711 aaPredicted RBP17.61■□□□□ 0.41
HPS1-203ENST00000359632 MAP2K1Q02750 393 aaPredicted RBP17.6■□□□□ 0.41
HPS1-203ENST00000359632 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
HPS1-203ENST00000359632 LDHDQ86WU2 507 aa17.6■□□□□ 0.41
HPS1-203ENST00000359632 C2CD5Q86YS7 1000 aa17.6■□□□□ 0.41
HPS1-203ENST00000359632 DLEC1Q9Y238 1755 aa17.6■□□□□ 0.41
HPS1-203ENST00000359632 ZPR1O75312 459 aa17.59■□□□□ 0.41
HPS1-203ENST00000359632 USPL1Q5W0Q7 1092 aa17.59■□□□□ 0.41
HPS1-203ENST00000359632 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
HPS1-203ENST00000359632 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
HPS1-203ENST00000359632 DEFB115Q30KQ5 88 aa17.58■□□□□ 0.4
HPS1-203ENST00000359632 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
HPS1-203ENST00000359632 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
HPS1-203ENST00000359632 PDE4DIPQ5VU43 2346 aa17.58■□□□□ 0.4
HPS1-203ENST00000359632 WDR33Q9C0J8 1336 aaKnown RBP17.57■□□□□ 0.4
HPS1-203ENST00000359632 H0YIN7 160 aa17.57■□□□□ 0.4
HPS1-203ENST00000359632 NFIXQ14938 502 aa17.57■□□□□ 0.4
HPS1-203ENST00000359632 IQCA1LA6NCM1 817 aa17.56■□□□□ 0.4
HPS1-203ENST00000359632 RASSF10A6NK89 507 aa17.56■□□□□ 0.4
HPS1-203ENST00000359632 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
HPS1-203ENST00000359632 ITGBL1O95965 494 aaPredicted RBP17.56■□□□□ 0.4
HPS1-203ENST00000359632 EAPPQ56P03 285 aaPredicted RBP17.56■□□□□ 0.4
HPS1-203ENST00000359632 DICER1Q9UPY3 1922 aaKnown RBP17.56■□□□□ 0.4
HPS1-203ENST00000359632 CARMIL3Q8ND23 1372 aa17.55■□□□□ 0.4
HPS1-203ENST00000359632 C21orf2O43822 256 aa17.55■□□□□ 0.4
HPS1-203ENST00000359632 SERPINB2P05120 415 aa17.55■□□□□ 0.4
HPS1-203ENST00000359632 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
HPS1-203ENST00000359632 SLC39A6Q13433 755 aa17.55■□□□□ 0.4
HPS1-203ENST00000359632 TAF1DQ9H5J8 278 aaPredicted RBP17.55■□□□□ 0.4
HPS1-203ENST00000359632 TJP1Q07157 1748 aa17.55■□□□□ 0.4
HPS1-203ENST00000359632 ADAMTS7Q9UKP4 1686 aa17.55■□□□□ 0.4
HPS1-203ENST00000359632 INTS5Q6P9B9 1019 aaKnown RBP17.54■□□□□ 0.4
HPS1-203ENST00000359632 ZNF622Q969S3 477 aaKnown RBP eCLIP17.54■□□□□ 0.4
HPS1-203ENST00000359632 SLC52A2Q9HAB3 445 aa17.54■□□□□ 0.4
HPS1-203ENST00000359632 ABT1Q9ULW3 272 aaKnown RBP17.54■□□□□ 0.4
HPS1-203ENST00000359632 NRXN2Q9P2S2 1712 aa17.54■□□□□ 0.4
HPS1-203ENST00000359632 PHACTR3Q96KR7 559 aa17.53■□□□□ 0.4
HPS1-203ENST00000359632 BEGAINQ9BUH8 593 aa17.53■□□□□ 0.4
HPS1-203ENST00000359632 TAOK3Q9H2K8 898 aa17.53■□□□□ 0.4
HPS1-203ENST00000359632 CLEC11AQ9Y240 323 aa17.53■□□□□ 0.4
HPS1-203ENST00000359632 TNRC18O15417 2968 aaPredicted RBP17.52■□□□□ 0.4
HPS1-203ENST00000359632 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.4
HPS1-203ENST00000359632 FER1L6Q2WGJ9 1857 aa17.52■□□□□ 0.39
HPS1-203ENST00000359632 PAXIP1Q6ZW49 1069 aaPredicted RBP17.51■□□□□ 0.39
HPS1-203ENST00000359632 IL17REQ8NFR9 667 aa17.51■□□□□ 0.39
HPS1-203ENST00000359632 TSKSQ9UJT2 592 aa17.51■□□□□ 0.39
HPS1-203ENST00000359632 SOS1Q07889 1333 aaPredicted RBP17.5■□□□□ 0.39
HPS1-203ENST00000359632 LTBP3Q9NS15 1303 aa17.5■□□□□ 0.39
HPS1-203ENST00000359632 GRM1Q13255 1194 aa17.5■□□□□ 0.39
HPS1-203ENST00000359632 L3MBTL3Q96JM7 780 aaPredicted RBP17.5■□□□□ 0.39
HPS1-203ENST00000359632 MCOLN1Q9GZU1 580 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms