RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 CHAMP1Q96JM3 812 aa18.02■□□□□ 0.48
UBAP1-202ENST00000359544 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.47
UBAP1-202ENST00000359544 FOXD4L5Q5VV16 416 aaPredicted RBP18.02■□□□□ 0.47
UBAP1-202ENST00000359544 FOXD4L4Q8WXT5 416 aaPredicted RBP18.02■□□□□ 0.47
UBAP1-202ENST00000359544 TMX3Q96JJ7 454 aa18.02■□□□□ 0.47
UBAP1-202ENST00000359544 ARHGEF10O15013 1369 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 ZBTB7CA1YPR0 619 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 INTS4Q96HW7 963 aaKnown RBP18.01■□□□□ 0.47
UBAP1-202ENST00000359544 A0A1W2PP64 1363 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 ALS2Q96Q42 1657 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 FCHSD2O94868 740 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 ADCY5O95622 1261 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 TPM3P06753 285 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 NLRP6P59044 892 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 CUL4AQ13619 759 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 KLHL34Q8N239 644 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 USP25Q9UHP3 1055 aa18.01■□□□□ 0.47
UBAP1-202ENST00000359544 COL22A1Q8NFW1 1626 aaPredicted RBP18■□□□□ 0.47
UBAP1-202ENST00000359544 TTC21BQ7Z4L5 1316 aa18■□□□□ 0.47
UBAP1-202ENST00000359544 NME9Q86XW9 330 aa18■□□□□ 0.47
UBAP1-202ENST00000359544 ZNF830Q96NB3 372 aaPredicted RBP18■□□□□ 0.47
UBAP1-202ENST00000359544 CHRNA2Q15822 529 aa18■□□□□ 0.47
UBAP1-202ENST00000359544 FEZ1Q99689 392 aa18■□□□□ 0.47
UBAP1-202ENST00000359544 TTC12Q9H892 705 aaPredicted RBP18■□□□□ 0.47
UBAP1-202ENST00000359544 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
UBAP1-202ENST00000359544 ANKRD7Q92527 254 aa17.99■□□□□ 0.47
UBAP1-202ENST00000359544 FAM83GA6ND36 823 aa17.99■□□□□ 0.47
UBAP1-202ENST00000359544 GNAI1P63096 354 aa17.99■□□□□ 0.47
UBAP1-202ENST00000359544 CCDC183Q5T5S1 534 aa17.99■□□□□ 0.47
UBAP1-202ENST00000359544 NEK4P51957 841 aa17.98■□□□□ 0.47
UBAP1-202ENST00000359544 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
UBAP1-202ENST00000359544 IFT57Q9NWB7 429 aa17.98■□□□□ 0.47
UBAP1-202ENST00000359544 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
UBAP1-202ENST00000359544 C16orf71Q8IYS4 520 aaPredicted RBP17.97■□□□□ 0.47
UBAP1-202ENST00000359544 ANKRD44Q8N8A2 993 aa17.97■□□□□ 0.47
UBAP1-202ENST00000359544 GGNBP2Q9H3C7 697 aa17.97■□□□□ 0.47
UBAP1-202ENST00000359544 USP21Q9UK80 565 aa17.97■□□□□ 0.47
UBAP1-202ENST00000359544 MCCP23508 829 aa17.97■□□□□ 0.47
UBAP1-202ENST00000359544 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
UBAP1-202ENST00000359544 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
UBAP1-202ENST00000359544 WDR33Q9C0J8 1336 aaKnown RBP17.95■□□□□ 0.46
UBAP1-202ENST00000359544 SPDYE4A6NLX3 237 aa17.95■□□□□ 0.46
UBAP1-202ENST00000359544 CTIFO43310 598 aaKnown RBP17.95■□□□□ 0.46
UBAP1-202ENST00000359544 FBLN1P23142 703 aa17.95■□□□□ 0.46
UBAP1-202ENST00000359544 C17orf53Q8N3J3 647 aaPredicted RBP17.95■□□□□ 0.46
UBAP1-202ENST00000359544 TMEM87AQ8NBN3 555 aa17.95■□□□□ 0.46
UBAP1-202ENST00000359544 KDM4AO75164 1064 aa17.95■□□□□ 0.46
UBAP1-202ENST00000359544 NFE2L2Q16236 605 aa17.95■□□□□ 0.46
UBAP1-202ENST00000359544 USP48Q86UV5 1035 aa17.95■□□□□ 0.46
UBAP1-202ENST00000359544 TSPYL6Q8N831 410 aa17.95■□□□□ 0.46
UBAP1-202ENST00000359544 KIAA1524Q8TCG1 905 aa17.95■□□□□ 0.46
UBAP1-202ENST00000359544 BBXQ8WY36 941 aaPredicted RBP17.95■□□□□ 0.46
UBAP1-202ENST00000359544 QTRT2Q9H974 415 aaKnown RBP17.95■□□□□ 0.46
UBAP1-202ENST00000359544 AKAP12Q02952 1782 aa17.94■□□□□ 0.46
UBAP1-202ENST00000359544 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
UBAP1-202ENST00000359544 FAM177BA6PVY3 158 aa17.94■□□□□ 0.46
UBAP1-202ENST00000359544 RIOK3O14730 519 aaKnown RBP17.94■□□□□ 0.46
UBAP1-202ENST00000359544 TWISTNBQ3B726 338 aaPredicted RBP17.94■□□□□ 0.46
UBAP1-202ENST00000359544 MPNDQ8N594 471 aa17.94■□□□□ 0.46
UBAP1-202ENST00000359544 ABCA3Q99758 1704 aa17.94■□□□□ 0.46
UBAP1-202ENST00000359544 OGFRQ9NZT2 677 aa17.94■□□□□ 0.46
UBAP1-202ENST00000359544 GOLGA6L6A8MZA4 724 aa17.94■□□□□ 0.46
UBAP1-202ENST00000359544 GADD45BO75293 160 aaPredicted RBP17.94■□□□□ 0.46
UBAP1-202ENST00000359544 GCP02774 474 aa17.94■□□□□ 0.46
UBAP1-202ENST00000359544 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
UBAP1-202ENST00000359544 ATP10DQ9P241 1426 aa17.93■□□□□ 0.46
UBAP1-202ENST00000359544 MX1P20591 662 aa17.93■□□□□ 0.46
UBAP1-202ENST00000359544 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
UBAP1-202ENST00000359544 ANAPC15P60006 121 aa17.93■□□□□ 0.46
UBAP1-202ENST00000359544 SYCP1Q15431 976 aa17.93■□□□□ 0.46
UBAP1-202ENST00000359544 OTUD7AQ8TE49 926 aaPredicted RBP17.93■□□□□ 0.46
UBAP1-202ENST00000359544 PRDM11Q9NQV5 511 aa17.93■□□□□ 0.46
UBAP1-202ENST00000359544 U2AF2P26368 475 aaKnown RBP eCLIP17.93■□□□□ 0.464e-8■□□□□ 9.6
UBAP1-202ENST00000359544 BTG4Q9NY30 223 aa17.93■□□□□ 0.46
UBAP1-202ENST00000359544 ZNF772Q68DY9 489 aaPredicted RBP17.92■□□□□ 0.46
UBAP1-202ENST00000359544 RTL1A6NKG5 1358 aa17.92■□□□□ 0.46
UBAP1-202ENST00000359544 HCLS1P14317 486 aaPredicted RBP17.92■□□□□ 0.46
UBAP1-202ENST00000359544 GABPB1Q06547 395 aaPredicted RBP17.92■□□□□ 0.46
UBAP1-202ENST00000359544 FNBP4Q8N3X1 1017 aaPredicted RBP17.92■□□□□ 0.46
UBAP1-202ENST00000359544 BCL9LQ86UU0 1499 aa17.91■□□□□ 0.46
UBAP1-202ENST00000359544 FYB1O15117 783 aa17.91■□□□□ 0.46
UBAP1-202ENST00000359544 ZNF853P0CG23 659 aa17.91■□□□□ 0.46
UBAP1-202ENST00000359544 ZNF771Q7L3S4 317 aaPredicted RBP17.91■□□□□ 0.46
UBAP1-202ENST00000359544 MBIPQ9NS73 344 aa17.91■□□□□ 0.46
UBAP1-202ENST00000359544 OSBPL3Q9H4L5 887 aa17.91■□□□□ 0.46
UBAP1-202ENST00000359544 RGS12O14924 1447 aa17.9■□□□□ 0.46
UBAP1-202ENST00000359544 NRKQ7Z2Y5 1582 aa17.9■□□□□ 0.46
UBAP1-202ENST00000359544 MON2Q7Z3U7 1717 aa17.9■□□□□ 0.46
UBAP1-202ENST00000359544 GTF2E1P29083 439 aaPredicted RBP17.9■□□□□ 0.46
UBAP1-202ENST00000359544 CEP85Q6P2H3 762 aa17.9■□□□□ 0.46
UBAP1-202ENST00000359544 CRYBG1Q9Y4K1 1723 aa17.9■□□□□ 0.46
UBAP1-202ENST00000359544 GDPD2Q9HCC8 539 aa17.9■□□□□ 0.46
UBAP1-202ENST00000359544 CCDC9Q9Y3X0 531 aaKnown RBP17.9■□□□□ 0.46
UBAP1-202ENST00000359544 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
UBAP1-202ENST00000359544 UBE2HP62256 183 aa17.89■□□□□ 0.45
UBAP1-202ENST00000359544 STRN4Q9NRL3 753 aa17.89■□□□□ 0.45
UBAP1-202ENST00000359544 PHRF1Q9P1Y6 1649 aaKnown RBP17.89■□□□□ 0.45
UBAP1-202ENST00000359544 LMOD3Q0VAK6 560 aa17.89■□□□□ 0.45
UBAP1-202ENST00000359544 EDC4Q6P2E9 1401 aaKnown RBP17.88■□□□□ 0.45
UBAP1-202ENST00000359544 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms