RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 ZHX1Q9UKY1 873 aaPredicted RBP14.33□□□□□ -0.12
DNMT1-202ENST00000359526 PREX2Q70Z35 1606 aa14.33□□□□□ -0.12
DNMT1-202ENST00000359526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.32□□□□□ -0.129e-7■□□□□ 10.8
DNMT1-202ENST00000359526 ZPR1O75312 459 aa14.32□□□□□ -0.12
DNMT1-202ENST00000359526 CWC27Q6UX04 472 aaKnown RBP14.32□□□□□ -0.12
DNMT1-202ENST00000359526 SCAND2PQ9GZW5 306 aaPredicted RBP14.32□□□□□ -0.12
DNMT1-202ENST00000359526 BABAM1Q9NWV8 329 aa14.32□□□□□ -0.12
DNMT1-202ENST00000359526 HECW2Q9P2P5 1572 aa14.32□□□□□ -0.12
DNMT1-202ENST00000359526 AXDND1Q5T1B0 1012 aaPredicted RBP14.32□□□□□ -0.12
DNMT1-202ENST00000359526 ERICH4A6NGS2 130 aa14.32□□□□□ -0.12
DNMT1-202ENST00000359526 DDX54Q8TDD1 881 aaKnown RBP14.32□□□□□ -0.12
DNMT1-202ENST00000359526 SSH1Q8WYL5 1049 aa14.32□□□□□ -0.12
DNMT1-202ENST00000359526 MPHOSPH8Q99549 860 aa14.32□□□□□ -0.12
DNMT1-202ENST00000359526 BRPF1P55201 1214 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-202ENST00000359526 WAPLQ7Z5K2 1190 aa14.31□□□□□ -0.12
DNMT1-202ENST00000359526 SYCE3A1L190 88 aa14.31□□□□□ -0.12
DNMT1-202ENST00000359526 MCM5P33992 734 aa14.31□□□□□ -0.12
DNMT1-202ENST00000359526 NPC1L1Q9UHC9 1359 aa14.31□□□□□ -0.12
DNMT1-202ENST00000359526 ZCCHC11Q5TAX3 1644 aaKnown RBP14.31□□□□□ -0.12
DNMT1-202ENST00000359526 YTHDC2Q9H6S0 1430 aaKnown RBP14.31□□□□□ -0.12
DNMT1-202ENST00000359526 ACEP12821 1306 aa14.31□□□□□ -0.12
DNMT1-202ENST00000359526 NGLY1Q96IV0 654 aa14.31□□□□□ -0.12
DNMT1-202ENST00000359526 GOLGA6L10A6NI86 522 aa14.3□□□□□ -0.12
DNMT1-202ENST00000359526 MAP4K4O95819 1239 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-202ENST00000359526 SHROOM2Q13796 1616 aa14.3□□□□□ -0.12
DNMT1-202ENST00000359526 CASTP20810 708 aaKnown RBP14.3□□□□□ -0.12
DNMT1-202ENST00000359526 SKIDA1Q1XH10 827 aa14.3□□□□□ -0.12
DNMT1-202ENST00000359526 DUSP27Q5VZP5 1158 aa14.3□□□□□ -0.12
DNMT1-202ENST00000359526 TBC1D2Q9BYX2 928 aa14.3□□□□□ -0.12
DNMT1-202ENST00000359526 SIL1Q9H173 461 aa14.3□□□□□ -0.12
DNMT1-202ENST00000359526 DEF6Q9H4E7 631 aa14.3□□□□□ -0.12
DNMT1-202ENST00000359526 CEP131Q9UPN4 1083 aa14.3□□□□□ -0.12
DNMT1-202ENST00000359526 CEP126Q9P2H0 1117 aa14.29□□□□□ -0.12
DNMT1-202ENST00000359526 C20orf194Q5TEA3 1177 aa14.29□□□□□ -0.12
DNMT1-202ENST00000359526 CGNQ9P2M7 1197 aaKnown RBP14.29□□□□□ -0.12
DNMT1-202ENST00000359526 FLT4P35916 1363 aa14.29□□□□□ -0.12
DNMT1-202ENST00000359526 NPATQ14207 1427 aa14.29□□□□□ -0.12
DNMT1-202ENST00000359526 CTAGE5O15320 804 aa14.29□□□□□ -0.12
DNMT1-202ENST00000359526 CEBPAP49715 358 aaPredicted RBP14.29□□□□□ -0.12
DNMT1-202ENST00000359526 IL1RAPL2Q9NP60 686 aa14.29□□□□□ -0.12
DNMT1-202ENST00000359526 PIK3R4Q99570 1358 aa14.29□□□□□ -0.12
DNMT1-202ENST00000359526 CCDC181Q5TID7 509 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 ANO10Q9NW15 660 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 TMOD2Q9NZR1 351 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 WDHD1O75717 1129 aaPredicted RBP14.28□□□□□ -0.12
DNMT1-202ENST00000359526 BMP2KLQ5H9B9 411 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 DBF4Q9UBU7 674 aaPredicted RBP14.28□□□□□ -0.12
DNMT1-202ENST00000359526 KRT18P05783 430 aaKnown RBP14.28□□□□□ -0.12
DNMT1-202ENST00000359526 HMGB1P09429 215 aaKnown RBP14.28□□□□□ -0.12
DNMT1-202ENST00000359526 SYCP1Q15431 976 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 GBP3Q9H0R5 595 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 ADCY10Q96PN6 1610 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 NEMFO60524 1076 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 IMMTQ16891 758 aaKnown RBP14.28□□□□□ -0.12
DNMT1-202ENST00000359526 KDM4AO75164 1064 aa14.28□□□□□ -0.12
DNMT1-202ENST00000359526 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.12
DNMT1-202ENST00000359526 ZSCAN12O43309 604 aa14.27□□□□□ -0.13
DNMT1-202ENST00000359526 TNPO1Q92973 898 aaKnown RBP14.27□□□□□ -0.13
DNMT1-202ENST00000359526 RRS1Q15050 365 aaKnown RBP14.27□□□□□ -0.13
DNMT1-202ENST00000359526 INSRP06213 1382 aa14.27□□□□□ -0.13
DNMT1-202ENST00000359526 KIAA0754O94854 1291 aa14.27□□□□□ -0.13
DNMT1-202ENST00000359526 UBXN4Q92575 508 aa14.27□□□□□ -0.13
DNMT1-202ENST00000359526 USP8P40818 1118 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 EXOC6BQ9Y2D4 811 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-202ENST00000359526 ZC3H6P61129 1189 aaKnown RBP14.26□□□□□ -0.13
DNMT1-202ENST00000359526 XPCQ01831 940 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-202ENST00000359526 SOGA3Q5TF21 947 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 PPP1R42Q7Z4L9 355 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 TMEM2Q9UHN6 1383 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 EDC4Q6P2E9 1401 aaKnown RBP14.26□□□□□ -0.13
DNMT1-202ENST00000359526 UVSSAQ2YD98 709 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 FILIP1Q7Z7B0 1213 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 NUTM1Q86Y26 1132 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 CALCOCO1Q9P1Z2 691 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 LIMCH1Q9UPQ0 1083 aa14.26□□□□□ -0.13
DNMT1-202ENST00000359526 UBAC1Q9BSL1 405 aa14.25□□□□□ -0.13
DNMT1-202ENST00000359526 PTPN14Q15678 1187 aa14.25□□□□□ -0.13
DNMT1-202ENST00000359526 TBC1D32Q96NH3 1257 aa14.25□□□□□ -0.13
DNMT1-202ENST00000359526 UBAP1LF5GYI3 381 aa14.25□□□□□ -0.13
DNMT1-202ENST00000359526 SFPQP23246 707 aaKnown RBP eCLIP14.25□□□□□ -0.13
DNMT1-202ENST00000359526 CLCN1P35523 988 aa14.25□□□□□ -0.13
DNMT1-202ENST00000359526 ZFYVE27Q5T4F4 411 aa14.25□□□□□ -0.13
DNMT1-202ENST00000359526 EPB41L2O43491 1005 aaKnown RBP14.25□□□□□ -0.13
DNMT1-202ENST00000359526 IKQ13123 557 aaPredicted RBP14.25□□□□□ -0.13
DNMT1-202ENST00000359526 ANKRD24Q8TF21 1146 aa14.25□□□□□ -0.13
DNMT1-202ENST00000359526 IFIT1P09914 478 aaKnown RBP14.24□□□□□ -0.13
DNMT1-202ENST00000359526 FKBP4Q02790 459 aaKnown RBP eCLIP14.24□□□□□ -0.13
DNMT1-202ENST00000359526 CCDC83Q8IWF9 413 aa14.24□□□□□ -0.13
DNMT1-202ENST00000359526 BBXQ8WY36 941 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-202ENST00000359526 BMP2KQ9NSY1 1161 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-202ENST00000359526 DDX19AQ9NUU7 478 aaKnown RBP14.24□□□□□ -0.13
DNMT1-202ENST00000359526 SAMD9LQ8IVG5 1584 aa14.24□□□□□ -0.13
DNMT1-202ENST00000359526 LMTK3Q96Q04 1460 aa14.24□□□□□ -0.13
DNMT1-202ENST00000359526 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
DNMT1-202ENST00000359526 KIF18AQ8NI77 898 aa14.24□□□□□ -0.13
DNMT1-202ENST00000359526 MTMR7Q9Y216 660 aa14.24□□□□□ -0.13
DNMT1-202ENST00000359526 PLEKHG1Q9ULL1 1385 aa14.24□□□□□ -0.13
DNMT1-202ENST00000359526 CAVIN2O95810 425 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms