RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 G3BP1Q13283 466 aaKnown RBP eCLIP7.85□□□□□ -1.151e-6■■□□□ 12.6
CSDE1-203ENST00000358528 ZNF771Q7L3S4 317 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-203ENST00000358528 MROH2AA6NES4 1674 aa7.85□□□□□ -1.15
CSDE1-203ENST00000358528 PI4KAP2A4QPH2 592 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 ZNF500O60304 480 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-203ENST00000358528 PI4KAP1Q8N8J0 262 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 BOLA2Q9H3K6 86 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 PA2G4Q9UQ80 394 aaKnown RBP7.84□□□□□ -1.15
CSDE1-203ENST00000358528 PPRC1Q5VV67 1664 aaKnown RBP7.84□□□□□ -1.15
CSDE1-203ENST00000358528 RAB11FIP3O75154 756 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 LETM1O95202 739 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-203ENST00000358528 UBE2HP62256 183 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 KRT85P78386 507 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 TPD52L1Q16890 204 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-203ENST00000358528 KIF1BPQ96EK5 621 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 NUP62CLQ9H1M0 184 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 PDCL2Q8N4E4 241 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 MAP3K19Q56UN5 1328 aa7.84□□□□□ -1.15
CSDE1-203ENST00000358528 KDM4AO75164 1064 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 F13A1P00488 732 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 CYP2E1P05181 493 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-203ENST00000358528 FILIP1Q7Z7B0 1213 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 SPATA32Q96LK8 384 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 FMNL2Q96PY5 1086 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 EYA1Q99502 592 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 ZNF330Q9Y3S2 320 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-203ENST00000358528 ADGRB3O60242 1522 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 MAP3K11Q16584 847 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 DNAJC2Q99543 621 aaKnown RBP7.83□□□□□ -1.16
CSDE1-203ENST00000358528 SNX14Q9Y5W7 946 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 EID1Q9Y6B2 187 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 ANAPC15P60006 121 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 HSP90AB4PQ58FF6 505 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 BLOC1S2Q6QNY1 142 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 RASEFQ8IZ41 740 aa7.83□□□□□ -1.16
CSDE1-203ENST00000358528 INTS4Q96HW7 963 aaKnown RBP7.83□□□□□ -1.16
CSDE1-203ENST00000358528 IBTKQ9P2D0 1353 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-203ENST00000358528 LUZP1Q86V48 1076 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 CHPF2Q9P2E5 772 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 PIK3R4Q99570 1358 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 CFAP74Q9C0B2 1584 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 NBPF7P0C2Y1 421 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-203ENST00000358528 PTGS1P23219 599 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 MPRIPQ6WCQ1 1025 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 CCDC186Q7Z3E2 898 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 PDLIM2Q96JY6 352 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 KIAA1210Q9ULL0 1709 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 PNPLA6Q8IY17 1366 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 GLRX3O76003 335 aaKnown RBP7.82□□□□□ -1.16
CSDE1-203ENST00000358528 SF3A1Q15459 793 aaKnown RBP7.82□□□□□ -1.16
CSDE1-203ENST00000358528 C1orf141Q5JVX7 400 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 RNF20Q5VTR2 975 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 CLEC17AQ6ZS10 378 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 LRRC2Q9BYS8 371 aa7.82□□□□□ -1.16
CSDE1-203ENST00000358528 ADGRB1O14514 1584 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 NEURL4Q96JN8 1562 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 EDC4Q6P2E9 1401 aaKnown RBP7.81□□□□□ -1.16
CSDE1-203ENST00000358528 YEATS2Q9ULM3 1422 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 MYL6BP14649 208 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 GUCY1B3Q02153 619 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 ZNF530Q6P9A1 599 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-203ENST00000358528 RIC3Q7Z5B4 369 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 DNAAF4Q8WXU2 420 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 USP44Q9H0E7 712 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 IL25Q9H293 177 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 DACT1Q9NYF0 836 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.81□□□□□ -1.16
CSDE1-203ENST00000358528 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.81□□□□□ -1.16
CSDE1-203ENST00000358528 V9GYY5 206 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-203ENST00000358528 SOS1Q07889 1333 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-203ENST00000358528 HTATSF1O43719 755 aaKnown RBP7.81□□□□□ -1.16
CSDE1-203ENST00000358528 LARGE1O95461 756 aa7.81□□□□□ -1.16
CSDE1-203ENST00000358528 TRMT1Q9NXH9 659 aaKnown RBP7.81□□□□□ -1.16
CSDE1-203ENST00000358528 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 CEBPAP49715 358 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-203ENST00000358528 UVSSAQ2YD98 709 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 ANO6Q4KMQ2 910 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 RUFY3Q7L099 469 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 PIBF1Q8WXW3 757 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 NEUROD6Q96NK8 337 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 RBM8AQ9Y5S9 174 aaKnown RBP7.8□□□□□ -1.16
CSDE1-203ENST00000358528 MED14O60244 1454 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 BTBD11A6QL63 1104 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 SGSM2O43147 1006 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 PSMA5P28066 241 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 HSPA4P34932 840 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 GORABQ5T7V8 394 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 MYRIPQ8NFW9 859 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 UHRF1BP1LA0JNW5 1464 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 CAMSAP1Q5T5Y3 1602 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 ABCC3O15438 1527 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 ARAP3Q8WWN8 1544 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 PDCP20941 246 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 PTH1RQ03431 593 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 CUL4AQ13619 759 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 CWF19L2Q2TBE0 894 aaKnown RBP7.8□□□□□ -1.16
CSDE1-203ENST00000358528 ADCK5Q3MIX3 580 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 ECHDC1Q9NTX5 307 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 PYCARDQ9ULZ3 195 aa7.8□□□□□ -1.16
CSDE1-203ENST00000358528 RIOK3O14730 519 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms