RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 PXDNLA1KZ92 1463 aa21.63■■□□□ 1.05
TPM1-205ENST00000357980 ZBTB7BO15156 539 aaPredicted RBP21.63■■□□□ 1.05
TPM1-205ENST00000357980 FKBP5Q13451 457 aaPredicted RBP21.63■■□□□ 1.05
TPM1-205ENST00000357980 PCDHB15Q9Y5E8 787 aa21.63■■□□□ 1.05
TPM1-205ENST00000357980 PDIA6Q15084 440 aa21.62■■□□□ 1.05
TPM1-205ENST00000357980 PROSER3Q2NL68 480 aa21.62■■□□□ 1.05
TPM1-205ENST00000357980 F6X3S4 739 aa21.62■■□□□ 1.05
TPM1-205ENST00000357980 ANXA1P04083 346 aa21.62■■□□□ 1.05
TPM1-205ENST00000357980 GJD4Q96KN9 370 aaPredicted RBP21.62■■□□□ 1.05
TPM1-205ENST00000357980 DDX21Q9NR30 783 aaKnown RBP eCLIP21.62■■□□□ 1.05
TPM1-205ENST00000357980 USP16Q9Y5T5 823 aa21.62■■□□□ 1.05
TPM1-205ENST00000357980 ASAP1Q9ULH1 1129 aa21.61■■□□□ 1.05
TPM1-205ENST00000357980 ATG3Q9NT62 314 aa21.6■■□□□ 1.05
TPM1-205ENST00000357980 PRIM1P49642 420 aaKnown RBP21.59■■□□□ 1.05
TPM1-205ENST00000357980 CENPQQ7L2Z9 268 aaPredicted RBP21.59■■□□□ 1.05
TPM1-205ENST00000357980 CHMP4BQ9H444 224 aaKnown RBP21.59■■□□□ 1.05
TPM1-205ENST00000357980 HYPKQ9NX55 129 aa21.59■■□□□ 1.05
TPM1-205ENST00000357980 TRPC5Q9UL62 973 aaPredicted RBP21.59■■□□□ 1.05
TPM1-205ENST00000357980 PTCD1O75127 700 aaKnown RBP21.59■■□□□ 1.05
TPM1-205ENST00000357980 CCT4P50991 539 aaKnown RBP21.58■■□□□ 1.05
TPM1-205ENST00000357980 IGHDP01880 384 aa21.57■■□□□ 1.04
TPM1-205ENST00000357980 LRP10Q7Z4F1 713 aa21.57■■□□□ 1.04
TPM1-205ENST00000357980 ADCY9O60503 1353 aa21.57■■□□□ 1.04
TPM1-205ENST00000357980 ONECUT3O60422 494 aaPredicted RBP21.57■■□□□ 1.04
TPM1-205ENST00000357980 SLC4A10Q6U841 1118 aa21.57■■□□□ 1.04
TPM1-205ENST00000357980 SYTL4Q96C24 671 aaPredicted RBP21.57■■□□□ 1.04
TPM1-205ENST00000357980 PELP1Q8IZL8 1130 aaKnown RBP21.56■■□□□ 1.04
TPM1-205ENST00000357980 VSIG10Q8N0Z9 540 aa21.56■■□□□ 1.04
TPM1-205ENST00000357980 ERBB4Q15303 1308 aa21.56■■□□□ 1.04
TPM1-205ENST00000357980 TJP1Q07157 1748 aa21.55■■□□□ 1.04
TPM1-205ENST00000357980 PI4KAP2A4QPH2 592 aa21.54■■□□□ 1.04
TPM1-205ENST00000357980 PI4KAP1Q8N8J0 262 aa21.54■■□□□ 1.04
TPM1-205ENST00000357980 ATP10DQ9P241 1426 aa21.53■■□□□ 1.04
TPM1-205ENST00000357980 A0A0G2JS52 829 aa21.53■■□□□ 1.04
TPM1-205ENST00000357980 MYT1Q01538 1121 aa21.53■■□□□ 1.04
TPM1-205ENST00000357980 ACSBG1Q96GR2 724 aa21.53■■□□□ 1.04
TPM1-205ENST00000357980 CICQ96RK0 1608 aaPredicted RBP21.53■■□□□ 1.04
TPM1-205ENST00000357980 DNAAF4Q8WXU2 420 aa21.52■■□□□ 1.04
TPM1-205ENST00000357980 QTRT2Q9H974 415 aaKnown RBP21.52■■□□□ 1.04
TPM1-205ENST00000357980 MYL6BP14649 208 aa21.52■■□□□ 1.04
TPM1-205ENST00000357980 HDAC1Q13547 482 aaPredicted RBP21.52■■□□□ 1.04
TPM1-205ENST00000357980 MEIS3Q99687 375 aa21.52■■□□□ 1.04
TPM1-205ENST00000357980 NHSQ6T4R5 1651 aa21.52■■□□□ 1.03
TPM1-205ENST00000357980 NBPF26B4DH59 902 aa21.51■■□□□ 1.03
TPM1-205ENST00000357980 NBPF14Q5TI25 921 aa21.51■■□□□ 1.03
TPM1-205ENST00000357980 NBPF10Q6P3W6 841 aaKnown RBP21.51■■□□□ 1.03
TPM1-205ENST00000357980 KSR2Q6VAB6 950 aa21.51■■□□□ 1.03
TPM1-205ENST00000357980 NBPF15Q8N660 670 aa21.51■■□□□ 1.03
TPM1-205ENST00000357980 SLC4A9Q96Q91 983 aa21.51■■□□□ 1.03
TPM1-205ENST00000357980 RWDD1Q9H446 243 aaPredicted RBP21.51■■□□□ 1.03
TPM1-205ENST00000357980 PIP4K2AP48426 406 aaPredicted RBP21.5■■□□□ 1.03
TPM1-205ENST00000357980 TEX13AQ9BXU3 409 aaPredicted RBP21.5■■□□□ 1.03
TPM1-205ENST00000357980 C1orf115Q9H7X2 142 aa21.5■■□□□ 1.03
TPM1-205ENST00000357980 ARFGEF2Q9Y6D5 1785 aa21.5■■□□□ 1.03
TPM1-205ENST00000357980 SBF2Q86WG5 1849 aa21.5■■□□□ 1.03
TPM1-205ENST00000357980 BEND3Q5T5X7 828 aa21.5■■□□□ 1.03
TPM1-205ENST00000357980 XAGE3Q8WTP9 111 aa21.5■■□□□ 1.03
TPM1-205ENST00000357980 RBM42Q9BTD8 480 aaKnown RBP21.5■■□□□ 1.03
TPM1-205ENST00000357980 KCNQ2O43526 872 aa21.49■■□□□ 1.03
TPM1-205ENST00000357980 DDX58O95786 925 aaKnown RBP21.49■■□□□ 1.03
TPM1-205ENST00000357980 DNAJC10Q8IXB1 793 aa21.49■■□□□ 1.03
TPM1-205ENST00000357980 MAP3K2Q9Y2U5 619 aa21.49■■□□□ 1.03
TPM1-205ENST00000357980 NUP188Q5SRE5 1749 aa21.49■■□□□ 1.03
TPM1-205ENST00000357980 ZNF831Q5JPB2 1677 aa21.48■■□□□ 1.03
TPM1-205ENST00000357980 A1BGP04217 495 aa21.48■■□□□ 1.03
TPM1-205ENST00000357980 COPS6Q7L5N1 327 aa21.48■■□□□ 1.03
TPM1-205ENST00000357980 AIMP1Q12904 312 aaKnown RBP21.48■■□□□ 1.03
TPM1-205ENST00000357980 SEPT12Q8IYM1 358 aa21.48■■□□□ 1.03
TPM1-205ENST00000357980 SRCIN1Q9C0H9 1055 aa21.48■■□□□ 1.03
TPM1-205ENST00000357980 BTAF1O14981 1849 aa21.48■■□□□ 1.03
TPM1-205ENST00000357980 BRWD3Q6RI45 1802 aa21.47■■□□□ 1.03
TPM1-205ENST00000357980 SIRT2Q8IXJ6 389 aa21.46■■□□□ 1.03
TPM1-205ENST00000357980 STARD3NLO95772 234 aa21.45■■□□□ 1.03
TPM1-205ENST00000357980 USP44Q9H0E7 712 aa21.45■■□□□ 1.03
TPM1-205ENST00000357980 PALLDQ8WX93 1383 aa21.45■■□□□ 1.02
TPM1-205ENST00000357980 IBTKQ9P2D0 1353 aaPredicted RBP21.44■■□□□ 1.02
TPM1-205ENST00000357980 RREB1Q92766 1687 aa21.44■■□□□ 1.02
TPM1-205ENST00000357980 GNAI3P08754 354 aa21.44■■□□□ 1.02
TPM1-205ENST00000357980 CYP19A1P11511 503 aaPredicted RBP21.44■■□□□ 1.02
TPM1-205ENST00000357980 ANKRD13DQ6ZTN6 518 aa21.44■■□□□ 1.02
TPM1-205ENST00000357980 COL5A3P25940 1745 aaPredicted RBP21.43■■□□□ 1.02
TPM1-205ENST00000357980 ALDH1L1O75891 902 aa21.43■■□□□ 1.02
TPM1-205ENST00000357980 RIC3Q7Z5B4 369 aa21.43■■□□□ 1.02
TPM1-205ENST00000357980 FBXO41Q8TF61 875 aa21.43■■□□□ 1.02
TPM1-205ENST00000357980 SMARCC1Q92922 1105 aaPredicted RBP21.43■■□□□ 1.02
TPM1-205ENST00000357980 ZNF772Q68DY9 489 aaPredicted RBP21.43■■□□□ 1.02
TPM1-205ENST00000357980 CEP85Q6P2H3 762 aa21.43■■□□□ 1.02
TPM1-205ENST00000357980 ANKRD44Q8N8A2 993 aa21.43■■□□□ 1.02
TPM1-205ENST00000357980 LINS1Q8NG48 757 aa21.43■■□□□ 1.02
TPM1-205ENST00000357980 AFDNP55196 1824 aaKnown RBP21.42■■□□□ 1.02
TPM1-205ENST00000357980 LOC102724428A0A0B4J2F2 783 aa21.42■■□□□ 1.02
TPM1-205ENST00000357980 SIK1P57059 783 aa21.42■■□□□ 1.02
TPM1-205ENST00000357980 FAM182BQ5T319 152 aa21.42■■□□□ 1.02
TPM1-205ENST00000357980 SKAP1Q86WV1 359 aa21.42■■□□□ 1.02
TPM1-205ENST00000357980 SMC5Q8IY18 1101 aa21.42■■□□□ 1.02
TPM1-205ENST00000357980 GNAI2P04899 355 aa21.41■■□□□ 1.02
TPM1-205ENST00000357980 PTF1AQ7RTS3 328 aa21.41■■□□□ 1.02
TPM1-205ENST00000357980 RPAP2Q8IXW5 612 aaPredicted RBP21.41■■□□□ 1.02
TPM1-205ENST00000357980 PLBD2Q8NHP8 589 aa21.41■■□□□ 1.02
TPM1-205ENST00000357980 METTL22Q9BUU2 404 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms