RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 ANKRD33BA6NCL7 494 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 SMTNL1A8MU46 457 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 MAGEA9P43362 315 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 GPS2Q13227 327 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 MAP9Q49MG5 647 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 SYT10Q6XYQ8 523 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 PLEKHG2Q9H7P9 1386 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 IRX1P78414 480 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-202ENST00000357710 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
PSEN1-202ENST00000357710 SRLQ86TD4 932 aa13.47□□□□□ -0.25
PSEN1-202ENST00000357710 ANKLE2Q86XL3 938 aa13.47□□□□□ -0.25
PSEN1-202ENST00000357710 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
PSEN1-202ENST00000357710 ZNF526Q8TF50 670 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-202ENST00000357710 TSHZ1Q6ZSZ6 1077 aa13.46□□□□□ -0.25
PSEN1-202ENST00000357710 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.25
PSEN1-202ENST00000357710 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.25
PSEN1-202ENST00000357710 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.25
PSEN1-202ENST00000357710 MYBBP1AQ9BQG0 1328 aaKnown RBP13.46□□□□□ -0.26
PSEN1-202ENST00000357710 ERCC3P19447 782 aa13.46□□□□□ -0.26
PSEN1-202ENST00000357710 NUCB2P80303 420 aa13.46□□□□□ -0.26
PSEN1-202ENST00000357710 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.26
PSEN1-202ENST00000357710 IQUBQ8NA54 791 aa13.46□□□□□ -0.26
PSEN1-202ENST00000357710 C22orf23Q9BZE7 217 aa13.46□□□□□ -0.26
PSEN1-202ENST00000357710 TBX22Q9Y458 520 aa13.46□□□□□ -0.26
PSEN1-202ENST00000357710 COQ9O75208 318 aa13.45□□□□□ -0.26
PSEN1-202ENST00000357710 SAFB2Q14151 953 aaKnown RBP eCLIP13.45□□□□□ -0.26
PSEN1-202ENST00000357710 FAM177BA6PVY3 158 aa13.45□□□□□ -0.26
PSEN1-202ENST00000357710 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
PSEN1-202ENST00000357710 FAM184AQ8NB25 1140 aa13.45□□□□□ -0.26
PSEN1-202ENST00000357710 XRN1Q8IZH2 1706 aaKnown RBP13.44□□□□□ -0.26
PSEN1-202ENST00000357710 GYS2P54840 703 aa13.44□□□□□ -0.26
PSEN1-202ENST00000357710 TPM4P67936 248 aa13.44□□□□□ -0.26
PSEN1-202ENST00000357710 PIK3R4Q99570 1358 aa13.44□□□□□ -0.26
PSEN1-202ENST00000357710 BMS1Q14692 1282 aaKnown RBP13.44□□□□□ -0.26
PSEN1-202ENST00000357710 ERCC4Q92889 916 aaPredicted RBP13.44□□□□□ -0.26
PSEN1-202ENST00000357710 PTCH1Q13635 1447 aa13.44□□□□□ -0.26
PSEN1-202ENST00000357710 PPP2R5AQ15172 486 aa13.43□□□□□ -0.26
PSEN1-202ENST00000357710 JAKMIP3Q5VZ66 844 aa13.43□□□□□ -0.26
PSEN1-202ENST00000357710 PPM1EQ8WY54 764 aa13.43□□□□□ -0.26
PSEN1-202ENST00000357710 CGNL1Q0VF96 1302 aa13.43□□□□□ -0.26
PSEN1-202ENST00000357710 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-202ENST00000357710 ATAD2Q6PL18 1390 aa13.43□□□□□ -0.26
PSEN1-202ENST00000357710 BAG4O95429 457 aaKnown RBP13.43□□□□□ -0.26
PSEN1-202ENST00000357710 CPP00450 1065 aa13.43□□□□□ -0.26
PSEN1-202ENST00000357710 MMS22LQ6ZRQ5 1243 aa13.43□□□□□ -0.26
PSEN1-202ENST00000357710 GOLGA5Q8TBA6 731 aa13.43□□□□□ -0.26
PSEN1-202ENST00000357710 TEX13AQ9BXU3 409 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-202ENST00000357710 RRP15Q9Y3B9 282 aaKnown RBP13.43□□□□□ -0.26
PSEN1-202ENST00000357710 ADGRB2O60241 1585 aa13.42□□□□□ -0.26
PSEN1-202ENST00000357710 NFATC2IPQ8NCF5 419 aa13.42□□□□□ -0.26
PSEN1-202ENST00000357710 NPHP4O75161 1426 aaPredicted RBP13.42□□□□□ -0.26
PSEN1-202ENST00000357710 PTPRUQ92729 1446 aa13.42□□□□□ -0.26
PSEN1-202ENST00000357710 IPO8O15397 1037 aaKnown RBP13.42□□□□□ -0.26
PSEN1-202ENST00000357710 TNNT1P13805 278 aa13.42□□□□□ -0.26
PSEN1-202ENST00000357710 CAVIN1Q6NZI2 390 aaKnown RBP13.42□□□□□ -0.26
PSEN1-202ENST00000357710 KRBA2Q6ZNG9 492 aa13.42□□□□□ -0.26
PSEN1-202ENST00000357710 CCDC191Q8NCU4 936 aa13.42□□□□□ -0.26
PSEN1-202ENST00000357710 HTATSF1O43719 755 aaKnown RBP13.41□□□□□ -0.26
PSEN1-202ENST00000357710 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
PSEN1-202ENST00000357710 ZSCAN26Q16670 478 aa13.41□□□□□ -0.26
PSEN1-202ENST00000357710 WAPLQ7Z5K2 1190 aa13.41□□□□□ -0.26
PSEN1-202ENST00000357710 C21orf2O43822 256 aa13.4□□□□□ -0.26
PSEN1-202ENST00000357710 FBXO18Q8NFZ0 1043 aa13.4□□□□□ -0.26
PSEN1-202ENST00000357710 KIAA1524Q8TCG1 905 aa13.4□□□□□ -0.26
PSEN1-202ENST00000357710 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
PSEN1-202ENST00000357710 TRIM66O15016 1216 aa13.4□□□□□ -0.26
PSEN1-202ENST00000357710 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-202ENST00000357710 IVLP07476 585 aa13.4□□□□□ -0.26
PSEN1-202ENST00000357710 ANKRD18BA2A2Z9 1011 aa13.39□□□□□ -0.27
PSEN1-202ENST00000357710 EIF3JO75822 258 aaKnown RBP13.39□□□□□ -0.27
PSEN1-202ENST00000357710 SART3Q15020 963 aaKnown RBP13.39□□□□□ -0.27
PSEN1-202ENST00000357710 RINLQ6ZS11 566 aa13.39□□□□□ -0.27
PSEN1-202ENST00000357710 HSP90AB4PQ58FF6 505 aa13.39□□□□□ -0.27
PSEN1-202ENST00000357710 STAG1Q8WVM7 1258 aa13.39□□□□□ -0.27
PSEN1-202ENST00000357710 SUDS3Q9H7L9 328 aaPredicted RBP13.39□□□□□ -0.27
PSEN1-202ENST00000357710 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
PSEN1-202ENST00000357710 USP8P40818 1118 aa13.38□□□□□ -0.27
PSEN1-202ENST00000357710 PACS2Q86VP3 889 aa13.38□□□□□ -0.27
PSEN1-202ENST00000357710 CWC22Q9HCG8 908 aaKnown RBP13.38□□□□□ -0.27
PSEN1-202ENST00000357710 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
PSEN1-202ENST00000357710 PSD3Q9NYI0 1048 aa13.38□□□□□ -0.27
PSEN1-202ENST00000357710 ANAPC4Q9UJX5 808 aa13.38□□□□□ -0.27
PSEN1-202ENST00000357710 AMOTL2Q9Y2J4 779 aa13.38□□□□□ -0.27
PSEN1-202ENST00000357710 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
PSEN1-202ENST00000357710 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
PSEN1-202ENST00000357710 MBD3O95983 291 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 TPM1P09493 284 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 LRRFIP2Q9Y608 721 aaKnown RBP13.37□□□□□ -0.27
PSEN1-202ENST00000357710 ANKRD36BQ8N2N9 1353 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 FMNL3Q8IVF7 1028 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 CDK19Q9BWU1 502 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 TSPY26PQ9H489 355 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 LMBRD1Q9NUN5 540 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 RPS6KL1Q9Y6S9 549 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.37□□□□□ -0.27
PSEN1-202ENST00000357710 TMTC2Q8N394 836 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 TSPAN18Q96SJ8 248 aa13.37□□□□□ -0.27
PSEN1-202ENST00000357710 ETAA1Q9NY74 926 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms