RNA–Protein interactions for RNA: ENST00000357632.6

CCR9-202, Transcript of C-C motif chemokine receptor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR9, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-202ENST00000357632 GLI3P10071 1580 aa13□□□□□ -0.33
CCR9-202ENST00000357632 SPATA31A1Q5TZJ5 1347 aa13□□□□□ -0.33
CCR9-202ENST00000357632 RGS3P49796 1198 aa13□□□□□ -0.33
CCR9-202ENST00000357632 MYT1Q01538 1121 aa13□□□□□ -0.33
CCR9-202ENST00000357632 BARGINQ6ZT62 677 aa13□□□□□ -0.33
CCR9-202ENST00000357632 NECTIN2Q92692 538 aa13□□□□□ -0.33
CCR9-202ENST00000357632 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
CCR9-202ENST00000357632 PHAXQ9H814 394 aaKnown RBP13□□□□□ -0.33
CCR9-202ENST00000357632 CEP85Q6P2H3 762 aa13□□□□□ -0.33
CCR9-202ENST00000357632 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
CCR9-202ENST00000357632 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
CCR9-202ENST00000357632 KCPQ6ZWJ8 1503 aa12.99□□□□□ -0.33
CCR9-202ENST00000357632 F6X3S4 739 aa12.99□□□□□ -0.33
CCR9-202ENST00000357632 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
CCR9-202ENST00000357632 MEIS3Q99687 375 aa12.99□□□□□ -0.33
CCR9-202ENST00000357632 EIF5BO60841 1220 aaKnown RBP12.99□□□□□ -0.33
CCR9-202ENST00000357632 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
CCR9-202ENST00000357632 CHD1LQ86WJ1 897 aa12.99□□□□□ -0.33
CCR9-202ENST00000357632 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
CCR9-202ENST00000357632 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
CCR9-202ENST00000357632 SPATA31A5Q5VU36 1347 aa12.98□□□□□ -0.33
CCR9-202ENST00000357632 SPATA31A7Q8IWB4 1347 aa12.98□□□□□ -0.33
CCR9-202ENST00000357632 BEND3Q5T5X7 828 aa12.98□□□□□ -0.33
CCR9-202ENST00000357632 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
CCR9-202ENST00000357632 UBTFL1P0CB47 393 aaPredicted RBP12.98□□□□□ -0.33
CCR9-202ENST00000357632 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
CCR9-202ENST00000357632 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
CCR9-202ENST00000357632 ADCY9O60503 1353 aa12.98□□□□□ -0.33
CCR9-202ENST00000357632 PDIA6Q15084 440 aa12.97□□□□□ -0.33
CCR9-202ENST00000357632 ATP8B2P98198 1209 aa12.97□□□□□ -0.33
CCR9-202ENST00000357632 LINS1Q8NG48 757 aa12.97□□□□□ -0.33
CCR9-202ENST00000357632 ADAMTS2O95450 1211 aa12.96□□□□□ -0.33
CCR9-202ENST00000357632 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.33
CCR9-202ENST00000357632 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
CCR9-202ENST00000357632 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.34
CCR9-202ENST00000357632 USP44Q9H0E7 712 aa12.96□□□□□ -0.34
CCR9-202ENST00000357632 USP35Q9P2H5 1018 aa12.96□□□□□ -0.34
CCR9-202ENST00000357632 BCL9O00512 1426 aa12.95□□□□□ -0.34
CCR9-202ENST00000357632 DDB1Q16531 1140 aa12.95□□□□□ -0.34
CCR9-202ENST00000357632 MAP3K2Q9Y2U5 619 aa12.95□□□□□ -0.34
CCR9-202ENST00000357632 UTYO14607 1347 aa12.95□□□□□ -0.34
CCR9-202ENST00000357632 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
CCR9-202ENST00000357632 ANP32AP39687 249 aaKnown RBP12.94□□□□□ -0.34
CCR9-202ENST00000357632 VPS72Q15906 364 aa12.94□□□□□ -0.34
CCR9-202ENST00000357632 C8orf34Q49A92 452 aa12.94□□□□□ -0.34
CCR9-202ENST00000357632 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
CCR9-202ENST00000357632 RIC3Q7Z5B4 369 aa12.94□□□□□ -0.34
CCR9-202ENST00000357632 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
CCR9-202ENST00000357632 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
CCR9-202ENST00000357632 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
CCR9-202ENST00000357632 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
CCR9-202ENST00000357632 HSP90AB4PQ58FF6 505 aa12.93□□□□□ -0.34
CCR9-202ENST00000357632 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
CCR9-202ENST00000357632 FNBP4Q8N3X1 1017 aaPredicted RBP12.93□□□□□ -0.34
CCR9-202ENST00000357632 METTL22Q9BUU2 404 aaPredicted RBP12.93□□□□□ -0.34
CCR9-202ENST00000357632 DOT1LQ8TEK3 1739 aa12.93□□□□□ -0.34
CCR9-202ENST00000357632 COL15A1P39059 1388 aa12.93□□□□□ -0.34
CCR9-202ENST00000357632 PRAMEF22A3QJZ6 481 aa12.93□□□□□ -0.34
CCR9-202ENST00000357632 MTX1Q13505 466 aa12.93□□□□□ -0.34
CCR9-202ENST00000357632 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
CCR9-202ENST00000357632 LRP10Q7Z4F1 713 aa12.93□□□□□ -0.34
CCR9-202ENST00000357632 PLBD2Q8NHP8 589 aa12.93□□□□□ -0.34
CCR9-202ENST00000357632 RAB11FIP3O75154 756 aa12.92□□□□□ -0.34
CCR9-202ENST00000357632 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
CCR9-202ENST00000357632 SSH3Q8TE77 659 aa12.92□□□□□ -0.34
CCR9-202ENST00000357632 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
CCR9-202ENST00000357632 COPS6Q7L5N1 327 aa12.92□□□□□ -0.34
CCR9-202ENST00000357632 XAGE3Q8WTP9 111 aa12.92□□□□□ -0.34
CCR9-202ENST00000357632 C9orf78Q9NZ63 289 aaPredicted RBP12.92□□□□□ -0.34
CCR9-202ENST00000357632 ZNF831Q5JPB2 1677 aa12.92□□□□□ -0.34
CCR9-202ENST00000357632 STARD3NLO95772 234 aa12.91□□□□□ -0.34
CCR9-202ENST00000357632 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
CCR9-202ENST00000357632 NUP188Q5SRE5 1749 aa12.91□□□□□ -0.34
CCR9-202ENST00000357632 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
CCR9-202ENST00000357632 ANXA1P04083 346 aa12.91□□□□□ -0.34
CCR9-202ENST00000357632 POLA2Q14181 598 aa12.91□□□□□ -0.34
CCR9-202ENST00000357632 PIGBQ92521 554 aa12.91□□□□□ -0.34
CCR9-202ENST00000357632 LNPKQ9C0E8 428 aa12.91□□□□□ -0.34
CCR9-202ENST00000357632 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
CCR9-202ENST00000357632 SKAP1Q86WV1 359 aa12.9□□□□□ -0.34
CCR9-202ENST00000357632 NGLY1Q96IV0 654 aa12.9□□□□□ -0.34
CCR9-202ENST00000357632 GRM8O00222 908 aa12.9□□□□□ -0.34
CCR9-202ENST00000357632 MYL6BP14649 208 aa12.9□□□□□ -0.34
CCR9-202ENST00000357632 UPF2Q9HAU5 1272 aaKnown RBP12.9□□□□□ -0.34
CCR9-202ENST00000357632 ATG3Q9NT62 314 aa12.9□□□□□ -0.34
CCR9-202ENST00000357632 DDRGK1Q96HY6 314 aa12.89□□□□□ -0.35
CCR9-202ENST00000357632 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
CCR9-202ENST00000357632 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
CCR9-202ENST00000357632 LRRCC1Q9C099 1032 aa12.88□□□□□ -0.35
CCR9-202ENST00000357632 CCDC9Q9Y3X0 531 aaKnown RBP12.88□□□□□ -0.35
CCR9-202ENST00000357632 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
CCR9-202ENST00000357632 OSBPL3Q9H4L5 887 aa12.88□□□□□ -0.35
CCR9-202ENST00000357632 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
CCR9-202ENST00000357632 AOX1Q06278 1338 aa12.87□□□□□ -0.35
CCR9-202ENST00000357632 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
CCR9-202ENST00000357632 NBPF7P0C2Y1 421 aaPredicted RBP12.87□□□□□ -0.35
CCR9-202ENST00000357632 GCKRQ14397 625 aa12.87□□□□□ -0.35
CCR9-202ENST00000357632 ERC1Q8IUD2 1116 aa12.87□□□□□ -0.35
CCR9-202ENST00000357632 C8orf37Q96NL8 207 aa12.87□□□□□ -0.35
CCR9-202ENST00000357632 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms