RNA–Protein interactions for RNA: ENST00000357545.8

SPOCK3-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPOCK3, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-202ENST00000357545 CCDC30Q5VVM6 783 aa17.57■□□□□ 0.4
SPOCK3-202ENST00000357545 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
SPOCK3-202ENST00000357545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
SPOCK3-202ENST00000357545 ACEP12821 1306 aa17.56■□□□□ 0.4
SPOCK3-202ENST00000357545 USP48Q86UV5 1035 aa17.56■□□□□ 0.4
SPOCK3-202ENST00000357545 MAP3K5Q99683 1374 aa17.56■□□□□ 0.4
SPOCK3-202ENST00000357545 NCKAP5LQ9HCH0 1330 aa17.56■□□□□ 0.4
SPOCK3-202ENST00000357545 KDM3BQ7LBC6 1761 aa17.56■□□□□ 0.4
SPOCK3-202ENST00000357545 HMGN5P82970 282 aaKnown RBP17.56■□□□□ 0.4
SPOCK3-202ENST00000357545 FLIIQ13045 1269 aa17.56■□□□□ 0.4
SPOCK3-202ENST00000357545 EXOC6BQ9Y2D4 811 aa17.56■□□□□ 0.4
SPOCK3-202ENST00000357545 PNMA6EA0A0J9YXQ4 647 aa17.55■□□□□ 0.4
SPOCK3-202ENST00000357545 HSP90AB2PQ58FF8 381 aa17.55■□□□□ 0.4
SPOCK3-202ENST00000357545 KCNB2Q92953 911 aa17.55■□□□□ 0.4
SPOCK3-202ENST00000357545 FUCA2Q9BTY2 467 aa17.55■□□□□ 0.4
SPOCK3-202ENST00000357545 TCHHQ07283 1943 aa17.55■□□□□ 0.4
SPOCK3-202ENST00000357545 TMEM2Q9UHN6 1383 aa17.55■□□□□ 0.4
SPOCK3-202ENST00000357545 CHAMP1Q96JM3 812 aa17.55■□□□□ 0.4
SPOCK3-202ENST00000357545 STK31Q9BXU1 1019 aa17.55■□□□□ 0.4
SPOCK3-202ENST00000357545 ANO2Q9NQ90 1003 aa17.54■□□□□ 0.4
SPOCK3-202ENST00000357545 PLEKHG1Q9ULL1 1385 aa17.54■□□□□ 0.4
SPOCK3-202ENST00000357545 F6X3S4 739 aa17.54■□□□□ 0.4
SPOCK3-202ENST00000357545 SGSM2O43147 1006 aa17.54■□□□□ 0.4
SPOCK3-202ENST00000357545 UBE2HP62256 183 aa17.54■□□□□ 0.4
SPOCK3-202ENST00000357545 SMAP1Q8IYB5 467 aaPredicted RBP17.54■□□□□ 0.4
SPOCK3-202ENST00000357545 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
SPOCK3-202ENST00000357545 NAP1L2Q9ULW6 460 aaPredicted RBP17.54■□□□□ 0.4
SPOCK3-202ENST00000357545 APBB1O00213 710 aa17.53■□□□□ 0.4
SPOCK3-202ENST00000357545 GADD45BO75293 160 aaPredicted RBP17.53■□□□□ 0.4
SPOCK3-202ENST00000357545 ZSCAN22P10073 491 aaPredicted RBP17.53■□□□□ 0.4
SPOCK3-202ENST00000357545 PI4K2BQ8TCG2 481 aa17.53■□□□□ 0.4
SPOCK3-202ENST00000357545 LSG1Q9H089 658 aaKnown RBP17.52■□□□□ 0.4
SPOCK3-202ENST00000357545 UNC5CLQ8IV45 518 aa17.52■□□□□ 0.4
SPOCK3-202ENST00000357545 USP44Q9H0E7 712 aa17.52■□□□□ 0.4
SPOCK3-202ENST00000357545 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
SPOCK3-202ENST00000357545 ATP6V1DQ9Y5K8 247 aa17.51■□□□□ 0.39
SPOCK3-202ENST00000357545 TPM3P06753 285 aa17.51■□□□□ 0.39
SPOCK3-202ENST00000357545 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.51■□□□□ 0.39
SPOCK3-202ENST00000357545 SLC4A10Q6U841 1118 aa17.51■□□□□ 0.39
SPOCK3-202ENST00000357545 SNX14Q9Y5W7 946 aa17.51■□□□□ 0.39
SPOCK3-202ENST00000357545 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
SPOCK3-202ENST00000357545 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
SPOCK3-202ENST00000357545 IL25Q9H293 177 aa17.5■□□□□ 0.39
SPOCK3-202ENST00000357545 PRDM4Q9UKN5 801 aa17.5■□□□□ 0.39
SPOCK3-202ENST00000357545 LIMCH1Q9UPQ0 1083 aa17.5■□□□□ 0.39
SPOCK3-202ENST00000357545 ADGRL3Q9HAR2 1447 aa17.5■□□□□ 0.39
SPOCK3-202ENST00000357545 RNF214Q8ND24 703 aa17.49■□□□□ 0.39
SPOCK3-202ENST00000357545 FAM13BQ9NYF5 915 aa17.49■□□□□ 0.39
SPOCK3-202ENST00000357545 BRD2P25440 801 aaKnown RBP17.49■□□□□ 0.39
SPOCK3-202ENST00000357545 HOMEZQ8IX15 550 aa17.49■□□□□ 0.39
SPOCK3-202ENST00000357545 USP25Q9UHP3 1055 aa17.49■□□□□ 0.39
SPOCK3-202ENST00000357545 LRRFIP2Q9Y608 721 aaKnown RBP17.49■□□□□ 0.39
SPOCK3-202ENST00000357545 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
SPOCK3-202ENST00000357545 CCDC171Q6TFL3 1326 aa17.49■□□□□ 0.39
SPOCK3-202ENST00000357545 TRIM6-TRIM34B2RNG4 842 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 KDM4AO75164 1064 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 F13A1P00488 732 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 PHRF1Q9P1Y6 1649 aaKnown RBP17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 FOXO3O43524 673 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 STX6O43752 255 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 HOXB7P09629 217 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 NOLC1Q14978 699 aaKnown RBP eCLIP17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 TSHZ3Q63HK5 1081 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 RILPL2Q969X0 211 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 CCDC94Q9BW85 323 aaPredicted RBP17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 LMO7Q8WWI1 1683 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 TNRQ92752 1358 aa17.48■□□□□ 0.39
SPOCK3-202ENST00000357545 RUFY3Q7L099 469 aa17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 EYA1Q99502 592 aa17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 ANKARQ7Z5J8 1434 aa17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 GNAT3A8MTJ3 354 aa17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 PTMAP06454 111 aaKnown RBP17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 KIF1BPQ96EK5 621 aa17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 SNRKQ9NRH2 765 aa17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
SPOCK3-202ENST00000357545 SYT1P21579 422 aa17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 MTX1Q13505 466 aa17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 ZSCAN31Q96LW9 406 aaPredicted RBP17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 SH2B1Q9NRF2 756 aaPredicted RBP17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 ADCY5O95622 1261 aa17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 UBTFL1P0CB47 393 aaPredicted RBP17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 VPS53Q5VIR6 699 aa17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 SLIT1O75093 1534 aa17.46■□□□□ 0.39
SPOCK3-202ENST00000357545 HSP90AB4PQ58FF6 505 aa17.45■□□□□ 0.38
SPOCK3-202ENST00000357545 CNTROBQ8N137 903 aa17.45■□□□□ 0.38
SPOCK3-202ENST00000357545 RHPN1Q8TCX5 695 aa17.45■□□□□ 0.38
SPOCK3-202ENST00000357545 LMTK3Q96Q04 1460 aa17.45■□□□□ 0.38
SPOCK3-202ENST00000357545 AK2P54819 239 aa17.45■□□□□ 0.38
SPOCK3-202ENST00000357545 UTP14CQ5TAP6 766 aaKnown RBP17.45■□□□□ 0.38
SPOCK3-202ENST00000357545 CNPY2Q9Y2B0 182 aa17.45■□□□□ 0.38
SPOCK3-202ENST00000357545 ELP1O95163 1332 aa17.44■□□□□ 0.38
SPOCK3-202ENST00000357545 ALDH8A1Q9H2A2 487 aaPredicted RBP17.44■□□□□ 0.38
SPOCK3-202ENST00000357545 HYPKQ9NX55 129 aa17.44■□□□□ 0.38
SPOCK3-202ENST00000357545 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
SPOCK3-202ENST00000357545 RGPD8O14715 1765 aaPredicted RBP17.44■□□□□ 0.38
SPOCK3-202ENST00000357545 TAF7Q15545 349 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms