RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TMEM87AQ8NBN3 555 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 PPM1EQ8WY54 764 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 PCDHB15Q9Y5E8 787 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 SHTN1A0MZ66 631 aa7.69□□□□□ -1.18
TRIM38-201ENST00000357085 FANCAO15360 1455 aa7.69□□□□□ -1.18
TRIM38-201ENST00000357085 NOB1Q9ULX3 412 aaKnown RBP7.69□□□□□ -1.18
TRIM38-201ENST00000357085 HCLS1P14317 486 aaPredicted RBP7.69□□□□□ -1.18
TRIM38-201ENST00000357085 TRIM27P14373 513 aa7.69□□□□□ -1.18
TRIM38-201ENST00000357085 CCDC50Q8IVM0 306 aa7.69□□□□□ -1.18
TRIM38-201ENST00000357085 LUC7LQ9NQ29 371 aaKnown RBP7.69□□□□□ -1.18
TRIM38-201ENST00000357085 GOLGA6L10A0A0M3HER8 536 aa7.69□□□□□ -1.18
TRIM38-201ENST00000357085 SLU7O95391 586 aaKnown RBP7.69□□□□□ -1.18
TRIM38-201ENST00000357085 IMPACTQ9P2X3 320 aa7.69□□□□□ -1.18
TRIM38-201ENST00000357085 NPM1P06748 294 aaKnown RBP eCLIP7.69□□□□□ -1.18
TRIM38-201ENST00000357085 GAS2L2Q8NHY3 880 aa7.69□□□□□ -1.18
TRIM38-201ENST00000357085 TDO2P48775 406 aa7.69□□□□□ -1.18
TRIM38-201ENST00000357085 KIF1CO43896 1103 aaKnown RBP7.68□□□□□ -1.18
TRIM38-201ENST00000357085 TESK2Q96S53 571 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 ZSCAN16Q9H4T2 348 aaPredicted RBP7.68□□□□□ -1.18
TRIM38-201ENST00000357085 LIMCH1Q9UPQ0 1083 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 DISP1Q96F81 1524 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 CDKL5O76039 1030 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 TICAM2Q86XR7 235 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 TSC1Q92574 1164 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 ESF1Q9H501 851 aaKnown RBP7.68□□□□□ -1.18
TRIM38-201ENST00000357085 HSP90B1P14625 803 aaKnown RBP7.68□□□□□ -1.18
TRIM38-201ENST00000357085 LRRCC1Q9C099 1032 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 PPIP5K1Q6PFW1 1433 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 LMAN1P49257 510 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 TRDNQ13061 729 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 TERF2Q15554 542 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 GORABQ5T7V8 394 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 YY1AP1Q9H869 796 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 ARFGAP3Q9NP61 516 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 CCDC30Q5VVM6 783 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 SPATA32Q96LK8 384 aa7.68□□□□□ -1.18
TRIM38-201ENST00000357085 ZNHIT6Q9NWK9 470 aaKnown RBP7.68□□□□□ -1.18
TRIM38-201ENST00000357085 ZNF518AQ6AHZ1 1483 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 GNAI2P04899 355 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 ZFP91Q96JP5 570 aaPredicted RBP7.67□□□□□ -1.18
TRIM38-201ENST00000357085 NLRP1Q9C000 1473 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 GOLGA6L10A6NI86 522 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 ZRSR2Q15696 482 aaKnown RBP7.67□□□□□ -1.18
TRIM38-201ENST00000357085 CHMP3Q9Y3E7 222 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 MYOM1P52179 1685 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 C10orf67Q8IYJ2 551 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 NEXMIFQ5QGS0 1516 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 KDM4AO75164 1064 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 KRBA2Q6ZNG9 492 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 C17orf53Q8N3J3 647 aaPredicted RBP7.67□□□□□ -1.18
TRIM38-201ENST00000357085 ATP7AQ04656 1500 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 TCHHQ07283 1943 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 PYM1Q9BRP8 204 aaKnown RBP7.67□□□□□ -1.18
TRIM38-201ENST00000357085 PTCH1Q13635 1447 aa7.67□□□□□ -1.18
TRIM38-201ENST00000357085 BCCIPQ9P287 314 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 ZC3H13Q5T200 1668 aaKnown RBP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 BANK1Q8NDB2 785 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 CHGAP10645 457 aaKnown RBP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 SF3A1Q15459 793 aaKnown RBP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 CT47A1Q5JQC4 288 aaPredicted RBP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 KIAA1328Q86T90 577 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 CDK12Q9NYV4 1490 aaPredicted RBP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 STX6O43752 255 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 SNW1Q13573 536 aaKnown RBP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 MED4Q9NPJ6 270 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 NOC3LQ8WTT2 800 aaKnown RBP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 SSR1P43307 286 aaKnown RBP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 TMEM57Q8N5G2 664 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 RILPL2Q969X0 211 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 RPGRIP1Q96KN7 1286 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 GEMIN8Q9NWZ8 242 aaKnown RBP7.66□□□□□ -1.18
TRIM38-201ENST00000357085 KCNJ6P48051 423 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 MNAT1P51948 309 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 GTF3C6Q969F1 213 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 MRFAP1L1Q96HT8 127 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 COG3Q96JB2 828 aa7.66□□□□□ -1.18
TRIM38-201ENST00000357085 ZSCAN22P10073 491 aaPredicted RBP7.65□□□□□ -1.18
TRIM38-201ENST00000357085 CASQ1P31415 396 aa7.65□□□□□ -1.18
TRIM38-201ENST00000357085 EIF5P55010 431 aaKnown RBP7.65□□□□□ -1.18
TRIM38-201ENST00000357085 UPF3BQ9BZI7 483 aaKnown RBP7.65□□□□□ -1.18
TRIM38-201ENST00000357085 TMEM51Q9NW97 253 aa7.65□□□□□ -1.18
TRIM38-201ENST00000357085 TTC21BQ7Z4L5 1316 aa7.65□□□□□ -1.18
TRIM38-201ENST00000357085 HNRNPMP52272 730 aaKnown RBP eCLIP7.65□□□□□ -1.18
TRIM38-201ENST00000357085 GOLGA5Q8TBA6 731 aa7.65□□□□□ -1.18
TRIM38-201ENST00000357085 DDX41Q9UJV9 622 aaKnown RBP7.65□□□□□ -1.18
TRIM38-201ENST00000357085 PIK3R4Q99570 1358 aa7.65□□□□□ -1.18
TRIM38-201ENST00000357085 EXOSC9Q06265 439 aaKnown RBP7.65□□□□□ -1.19
TRIM38-201ENST00000357085 SYNE3Q6ZMZ3 975 aa7.65□□□□□ -1.19
TRIM38-201ENST00000357085 CEP112Q8N8E3 955 aa7.65□□□□□ -1.19
TRIM38-201ENST00000357085 TOMM22Q9NS69 142 aa7.65□□□□□ -1.19
TRIM38-201ENST00000357085 FCHSD1Q86WN1 690 aa7.65□□□□□ -1.19
TRIM38-201ENST00000357085 TTC41PQ6P2S7 1318 aa7.65□□□□□ -1.19
TRIM38-201ENST00000357085 ADGRB2O60241 1585 aa7.65□□□□□ -1.19
TRIM38-201ENST00000357085 SSH1Q8WYL5 1049 aa7.65□□□□□ -1.19
TRIM38-201ENST00000357085 DNAI1Q9UI46 699 aa7.65□□□□□ -1.19
TRIM38-201ENST00000357085 IQSEC3Q9UPP2 1182 aaPredicted RBP7.65□□□□□ -1.19
TRIM38-201ENST00000357085 IQCDQ96DY2 449 aa7.64□□□□□ -1.19
TRIM38-201ENST00000357085 KIAA0232Q92628 1395 aa7.64□□□□□ -1.19
TRIM38-201ENST00000357085 HECW2Q9P2P5 1572 aa7.64□□□□□ -1.19
TRIM38-201ENST00000357085 CHD2O14647 1828 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms