RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 SYNE4Q8N205 404 aa17.3■□□□□ 0.36
LSS-201ENST00000356396 ANKRD44Q8N8A2 993 aa17.3■□□□□ 0.36
LSS-201ENST00000356396 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
LSS-201ENST00000356396 GNAI2P04899 355 aa17.3■□□□□ 0.36
LSS-201ENST00000356396 PDIA6Q15084 440 aa17.3■□□□□ 0.36
LSS-201ENST00000356396 C8orf37Q96NL8 207 aa17.29■□□□□ 0.36
LSS-201ENST00000356396 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
LSS-201ENST00000356396 WDR17Q8IZU2 1322 aa17.29■□□□□ 0.36
LSS-201ENST00000356396 UNC5CLQ8IV45 518 aa17.29■□□□□ 0.36
LSS-201ENST00000356396 PLEKHM2Q8IWE5 1019 aa17.29■□□□□ 0.36
LSS-201ENST00000356396 RILPL2Q969X0 211 aa17.29■□□□□ 0.36
LSS-201ENST00000356396 ADCY9O60503 1353 aa17.29■□□□□ 0.36
LSS-201ENST00000356396 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
LSS-201ENST00000356396 IL2RBP14784 551 aa17.28■□□□□ 0.36
LSS-201ENST00000356396 BRPF1P55201 1214 aaPredicted RBP17.28■□□□□ 0.36
LSS-201ENST00000356396 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
LSS-201ENST00000356396 HTATSF1O43719 755 aaKnown RBP17.28■□□□□ 0.36
LSS-201ENST00000356396 PTPRCP08575 1304 aa17.28■□□□□ 0.36
LSS-201ENST00000356396 EPHA10Q5JZY3 1008 aa17.28■□□□□ 0.36
LSS-201ENST00000356396 DAXXQ9UER7 740 aaPredicted RBP17.28■□□□□ 0.36
LSS-201ENST00000356396 SLIT3O75094 1523 aa17.27■□□□□ 0.36
LSS-201ENST00000356396 BEND3Q5T5X7 828 aa17.27■□□□□ 0.36
LSS-201ENST00000356396 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.36
LSS-201ENST00000356396 OS9Q13438 667 aaPredicted RBP17.27■□□□□ 0.35
LSS-201ENST00000356396 CHGBP05060 677 aa17.26■□□□□ 0.35
LSS-201ENST00000356396 DCTPP1Q9H773 170 aa17.26■□□□□ 0.35
LSS-201ENST00000356396 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
LSS-201ENST00000356396 TRIM6-TRIM34B2RNG4 842 aa17.26■□□□□ 0.35
LSS-201ENST00000356396 NBPF26B4DH59 902 aa17.26■□□□□ 0.35
LSS-201ENST00000356396 NBPF14Q5TI25 921 aa17.26■□□□□ 0.35
LSS-201ENST00000356396 NBPF10Q6P3W6 841 aaKnown RBP17.26■□□□□ 0.35
LSS-201ENST00000356396 TBC1D9Q6ZT07 1266 aa17.26■□□□□ 0.35
LSS-201ENST00000356396 NBPF15Q8N660 670 aa17.26■□□□□ 0.35
LSS-201ENST00000356396 ALS2Q96Q42 1657 aa17.25■□□□□ 0.35
LSS-201ENST00000356396 KCNQ2O43526 872 aa17.25■□□□□ 0.35
LSS-201ENST00000356396 IGKV5-2P06315 115 aa17.25■□□□□ 0.35
LSS-201ENST00000356396 GPTP24298 496 aa17.25■□□□□ 0.35
LSS-201ENST00000356396 CCT4P50991 539 aaKnown RBP17.25■□□□□ 0.35
LSS-201ENST00000356396 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
LSS-201ENST00000356396 UBE3BQ7Z3V4 1068 aa17.25■□□□□ 0.35
LSS-201ENST00000356396 SUCLG2Q96I99 432 aa17.25■□□□□ 0.35
LSS-201ENST00000356396 DNAJC10Q8IXB1 793 aa17.24■□□□□ 0.35
LSS-201ENST00000356396 CD2BP2O95400 341 aaKnown RBP17.24■□□□□ 0.35
LSS-201ENST00000356396 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
LSS-201ENST00000356396 PIGBQ92521 554 aa17.24■□□□□ 0.35
LSS-201ENST00000356396 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
LSS-201ENST00000356396 IL25Q9H293 177 aa17.23■□□□□ 0.35
LSS-201ENST00000356396 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
LSS-201ENST00000356396 SDSP20132 328 aa17.23■□□□□ 0.35
LSS-201ENST00000356396 FAM98CQ17RN3 349 aaKnown RBP17.23■□□□□ 0.35
LSS-201ENST00000356396 LARP6Q9BRS8 491 aaKnown RBP17.22■□□□□ 0.35
LSS-201ENST00000356396 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
LSS-201ENST00000356396 CCDC8Q9H0W5 538 aaPredicted RBP17.22■□□□□ 0.35
LSS-201ENST00000356396 EDC3Q96F86 508 aaKnown RBP17.22■□□□□ 0.35
LSS-201ENST00000356396 KAZALD1Q96I82 304 aa17.22■□□□□ 0.35
LSS-201ENST00000356396 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
LSS-201ENST00000356396 GCC1Q96CN9 775 aa17.21■□□□□ 0.35
LSS-201ENST00000356396 ZNF594Q96JF6 807 aaPredicted RBP17.2■□□□□ 0.34
LSS-201ENST00000356396 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
LSS-201ENST00000356396 TBC1D2BQ9UPU7 963 aa17.2■□□□□ 0.34
LSS-201ENST00000356396 SLFNL1Q499Z3 407 aa17.2■□□□□ 0.34
LSS-201ENST00000356396 ANKRD13DQ6ZTN6 518 aa17.19■□□□□ 0.34
LSS-201ENST00000356396 FMNL2Q96PY5 1086 aa17.19■□□□□ 0.34
LSS-201ENST00000356396 SLC4A9Q96Q91 983 aa17.19■□□□□ 0.34
LSS-201ENST00000356396 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
LSS-201ENST00000356396 KSR2Q6VAB6 950 aa17.19■□□□□ 0.34
LSS-201ENST00000356396 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
LSS-201ENST00000356396 CCDC24Q8N4L8 307 aa17.19■□□□□ 0.34
LSS-201ENST00000356396 SNRPA1P09661 255 aaKnown RBP17.19■□□□□ 0.34
LSS-201ENST00000356396 DDX21Q9NR30 783 aaKnown RBP eCLIP17.19■□□□□ 0.34
LSS-201ENST00000356396 PHRF1Q9P1Y6 1649 aaKnown RBP17.18■□□□□ 0.34
LSS-201ENST00000356396 ATP8B2P98198 1209 aa17.18■□□□□ 0.34
LSS-201ENST00000356396 NGLY1Q96IV0 654 aa17.18■□□□□ 0.34
LSS-201ENST00000356396 DCCP43146 1447 aa17.18■□□□□ 0.34
LSS-201ENST00000356396 A0A087WZG4 1122 aa17.17■□□□□ 0.34
LSS-201ENST00000356396 GNAI3P08754 354 aa17.17■□□□□ 0.34
LSS-201ENST00000356396 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
LSS-201ENST00000356396 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
LSS-201ENST00000356396 LRRCC1Q9C099 1032 aa17.17■□□□□ 0.34
LSS-201ENST00000356396 PDE1AP54750 535 aa17.17■□□□□ 0.34
LSS-201ENST00000356396 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
LSS-201ENST00000356396 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
LSS-201ENST00000356396 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
LSS-201ENST00000356396 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
LSS-201ENST00000356396 FAM89AQ96GI7 184 aa17.16■□□□□ 0.34
LSS-201ENST00000356396 TPRNQ4KMQ1 711 aa17.15■□□□□ 0.34
LSS-201ENST00000356396 TTC22Q5TAA0 569 aa17.15■□□□□ 0.34
LSS-201ENST00000356396 KIF1AQ12756 1690 aa17.15■□□□□ 0.34
LSS-201ENST00000356396 HLFQ16534 295 aa17.15■□□□□ 0.34
LSS-201ENST00000356396 COL18A1P39060 1754 aa17.15■□□□□ 0.34
LSS-201ENST00000356396 GRM8O00222 908 aa17.14■□□□□ 0.33
LSS-201ENST00000356396 EXOC5O00471 708 aa17.14■□□□□ 0.33
LSS-201ENST00000356396 SNAP23O00161 211 aa17.14■□□□□ 0.33
LSS-201ENST00000356396 HMMRO75330 724 aa17.14■□□□□ 0.33
LSS-201ENST00000356396 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
LSS-201ENST00000356396 CHAMP1Q96JM3 812 aa17.14■□□□□ 0.33
LSS-201ENST00000356396 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
LSS-201ENST00000356396 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
LSS-201ENST00000356396 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
LSS-201ENST00000356396 FOXD4L5Q5VV16 416 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms