RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 RAPGEF4Q8WZA2 1011 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 CFAP53Q96M91 514 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 TOGARAM1Q9Y4F4 1720 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 IL13P35225 146 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 FAM196AQ6ZSG2 479 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 USHBP1Q8N6Y0 703 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 UPF1Q92900 1129 aaKnown RBP eCLIP5.34□□□□□ -1.55
CNOT4-202ENST00000356162 DDX27Q96GQ7 796 aaKnown RBP5.34□□□□□ -1.55
CNOT4-202ENST00000356162 EYA1Q99502 592 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 MYBBP1AQ9BQG0 1328 aaKnown RBP5.34□□□□□ -1.55
CNOT4-202ENST00000356162 PCDH11XQ9BZA7 1347 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 PCDH11YQ9BZA8 1340 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 EXOC5O00471 708 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 TBC1D12O60347 775 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 DIAPH1O60610 1272 aaKnown RBP5.34□□□□□ -1.55
CNOT4-202ENST00000356162 CCDC125Q86Z20 511 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 SPRYD3Q8NCJ5 442 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.34□□□□□ -1.55
CNOT4-202ENST00000356162 BTAF1O14981 1849 aa5.34□□□□□ -1.55
CNOT4-202ENST00000356162 VIRMAQ69YN4 1812 aaKnown RBP5.33□□□□□ -1.56
CNOT4-202ENST00000356162 ADAMTS7Q9UKP4 1686 aa5.33□□□□□ -1.56
CNOT4-202ENST00000356162 MMRN1Q13201 1228 aa5.33□□□□□ -1.56
CNOT4-202ENST00000356162 NUP188Q5SRE5 1749 aa5.33□□□□□ -1.56
CNOT4-202ENST00000356162 MARCH10Q8NA82 808 aaPredicted RBP5.33□□□□□ -1.56
CNOT4-202ENST00000356162 ZCRB1Q8TBF4 217 aaKnown RBP5.33□□□□□ -1.56
CNOT4-202ENST00000356162 ITGB4P16144 1822 aa5.33□□□□□ -1.56
CNOT4-202ENST00000356162 SCN11AQ9UI33 1791 aa5.32□□□□□ -1.56
CNOT4-202ENST00000356162 CNGB1Q14028 1251 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-202ENST00000356162 SPG7Q9UQ90 795 aa5.32□□□□□ -1.56
CNOT4-202ENST00000356162 MRC1P22897 1456 aa5.32□□□□□ -1.56
CNOT4-202ENST00000356162 PSDA5PKW4 1024 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-202ENST00000356162 SF3B2Q13435 895 aaKnown RBP5.32□□□□□ -1.56
CNOT4-202ENST00000356162 PRKRIP1Q9H875 184 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-202ENST00000356162 NUDCQ9Y266 331 aa5.32□□□□□ -1.56
CNOT4-202ENST00000356162 PAPPAQ13219 1627 aa5.31□□□□□ -1.56
CNOT4-202ENST00000356162 LY75O60449 1722 aa5.31□□□□□ -1.56
CNOT4-202ENST00000356162 AMOTQ4VCS5 1084 aa5.31□□□□□ -1.56
CNOT4-202ENST00000356162 SULT6B1Q6IMI4 303 aa5.31□□□□□ -1.56
CNOT4-202ENST00000356162 AEBP1Q8IUX7 1158 aa5.31□□□□□ -1.56
CNOT4-202ENST00000356162 PBX2P40425 430 aa5.31□□□□□ -1.56
CNOT4-202ENST00000356162 BAG6P46379 1132 aa5.31□□□□□ -1.56
CNOT4-202ENST00000356162 PLEKHO1Q53GL0 409 aaPredicted RBP5.31□□□□□ -1.56
CNOT4-202ENST00000356162 FAM182BQ5T319 152 aa5.31□□□□□ -1.56
CNOT4-202ENST00000356162 SIPA1L3O60292 1781 aaPredicted RBP5.3□□□□□ -1.56
CNOT4-202ENST00000356162 POTEEQ6S8J3 1075 aa5.3□□□□□ -1.56
CNOT4-202ENST00000356162 CICQ96RK0 1608 aaPredicted RBP5.3□□□□□ -1.56
CNOT4-202ENST00000356162 ZNF831Q5JPB2 1677 aa5.3□□□□□ -1.56
CNOT4-202ENST00000356162 KDM6AO15550 1401 aaPredicted RBP5.3□□□□□ -1.56
CNOT4-202ENST00000356162 U2SURPO15042 1029 aaKnown RBP5.3□□□□□ -1.56
CNOT4-202ENST00000356162 CYP27B1O15528 508 aa5.3□□□□□ -1.56
CNOT4-202ENST00000356162 TRIM37O94972 964 aa5.3□□□□□ -1.56
CNOT4-202ENST00000356162 HSP90AB1P08238 724 aaKnown RBP5.3□□□□□ -1.56
CNOT4-202ENST00000356162 PHKG2P15735 406 aa5.3□□□□□ -1.56
CNOT4-202ENST00000356162 ZNF530Q6P9A1 599 aaPredicted RBP5.3□□□□□ -1.56
CNOT4-202ENST00000356162 PAXIP1Q6ZW49 1069 aaPredicted RBP5.3□□□□□ -1.56
CNOT4-202ENST00000356162 IFNL2Q8IZJ0 200 aa5.3□□□□□ -1.56
CNOT4-202ENST00000356162 DDX54Q8TDD1 881 aaKnown RBP5.3□□□□□ -1.56
CNOT4-202ENST00000356162 RSPH6AQ9H0K4 717 aa5.3□□□□□ -1.56
CNOT4-202ENST00000356162 QSER1Q2KHR3 1735 aa5.3□□□□□ -1.56
CNOT4-202ENST00000356162 DLG5Q8TDM6 1919 aa5.29□□□□□ -1.56
CNOT4-202ENST00000356162 EMILIN3Q9NT22 766 aa5.29□□□□□ -1.56
CNOT4-202ENST00000356162 MAP3K5Q99683 1374 aa5.29□□□□□ -1.56
CNOT4-202ENST00000356162 ANP32CO43423 234 aa5.29□□□□□ -1.56
CNOT4-202ENST00000356162 HMOX1P09601 288 aa5.29□□□□□ -1.56
CNOT4-202ENST00000356162 LSM11P83369 360 aaKnown RBP eCLIP5.29□□□□□ -1.56
CNOT4-202ENST00000356162 C1orf141Q5JVX7 400 aa5.29□□□□□ -1.56
CNOT4-202ENST00000356162 GAS2L2Q8NHY3 880 aa5.29□□□□□ -1.56
CNOT4-202ENST00000356162 CFAP44Q96MT7 982 aa5.29□□□□□ -1.56
CNOT4-202ENST00000356162 C5P01031 1676 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 FCHSD2O94868 740 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 U2AF1L5P0DN76 240 aaPredicted RBP5.28□□□□□ -1.56
CNOT4-202ENST00000356162 PRKAR2BP31323 418 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 U2AF1Q01081 240 aaKnown RBP eCLIP5.28□□□□□ -1.563e-20■■■■■ 41.5
CNOT4-202ENST00000356162 AKAP4Q5JQC9 854 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 ACSBG1Q96GR2 724 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 UBR2Q8IWV8 1755 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 TAF1LQ8IZX4 1826 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 PLSCR1O15162 318 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 APBA3O96018 575 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 CAMK2BQ13554 666 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 PPP4R3BQ5MIZ7 849 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 DCAF5Q96JK2 942 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 CAMKK2Q96RR4 588 aa5.28□□□□□ -1.56
CNOT4-202ENST00000356162 PNNQ9H307 717 aaKnown RBP5.28□□□□□ -1.56
CNOT4-202ENST00000356162 ANO8Q9HCE9 1232 aaPredicted RBP5.28□□□□□ -1.56
CNOT4-202ENST00000356162 ERVV-2B6SEH9 535 aa5.27□□□□□ -1.57
CNOT4-202ENST00000356162 DEFB132Q7Z7B7 95 aa5.27□□□□□ -1.57
CNOT4-202ENST00000356162 TUBGCP6Q96RT7 1819 aa5.27□□□□□ -1.57
CNOT4-202ENST00000356162 COL5A3P25940 1745 aaPredicted RBP5.27□□□□□ -1.57
CNOT4-202ENST00000356162 KCNQ2O43526 872 aa5.27□□□□□ -1.57
CNOT4-202ENST00000356162 EVI5O60447 810 aa5.27□□□□□ -1.57
CNOT4-202ENST00000356162 NEFMP07197 916 aa5.27□□□□□ -1.57
CNOT4-202ENST00000356162 WDR43Q15061 677 aaKnown RBP eCLIP5.27□□□□□ -1.57
CNOT4-202ENST00000356162 MTHFSDQ2M296 383 aaKnown RBP5.27□□□□□ -1.57
CNOT4-202ENST00000356162 ANKRD13DQ6ZTN6 518 aa5.27□□□□□ -1.57
CNOT4-202ENST00000356162 KAT6BQ8WYB5 2073 aa5.27□□□□□ -1.57
CNOT4-202ENST00000356162 TJP1Q07157 1748 aa5.27□□□□□ -1.57
CNOT4-202ENST00000356162 MAPK8IP3Q9UPT6 1336 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 KDM3BQ7LBC6 1761 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 CASZ1Q86V15 1759 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms