RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 CHL1O00533 1208 aa16.25■□□□□ 0.19
TRIM4-203ENST00000355947 DDX11Q96FC9 970 aa16.25■□□□□ 0.19
TRIM4-203ENST00000355947 TNMDQ9H2S6 317 aa16.25■□□□□ 0.19
TRIM4-203ENST00000355947 ATP10DQ9P241 1426 aa16.25■□□□□ 0.19
TRIM4-203ENST00000355947 SNX14Q9Y5W7 946 aa16.25■□□□□ 0.19
TRIM4-203ENST00000355947 SIL1Q9H173 461 aa16.24■□□□□ 0.19
TRIM4-203ENST00000355947 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
TRIM4-203ENST00000355947 GLI2P10070 1586 aa16.24■□□□□ 0.19
TRIM4-203ENST00000355947 HSP90B1P14625 803 aaKnown RBP16.24■□□□□ 0.19
TRIM4-203ENST00000355947 CUL4AQ13619 759 aa16.24■□□□□ 0.19
TRIM4-203ENST00000355947 RUFY3Q7L099 469 aa16.24■□□□□ 0.19
TRIM4-203ENST00000355947 NUP62CLQ9H1M0 184 aa16.24■□□□□ 0.19
TRIM4-203ENST00000355947 ADGRB2O60241 1585 aa16.24■□□□□ 0.19
TRIM4-203ENST00000355947 EFCAB6Q5THR3 1501 aa16.24■□□□□ 0.19
TRIM4-203ENST00000355947 ZSCAN20P17040 1043 aaPredicted RBP16.24■□□□□ 0.19
TRIM4-203ENST00000355947 ADCK5Q3MIX3 580 aa16.24■□□□□ 0.19
TRIM4-203ENST00000355947 WASLO00401 505 aaPredicted RBP16.23■□□□□ 0.19
TRIM4-203ENST00000355947 TNNT1P13805 278 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 LIG1P18858 919 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 HDGFL1Q5TGJ6 251 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 PTPRCP08575 1304 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 COL3A1P02461 1466 aaPredicted RBP16.23■□□□□ 0.19
TRIM4-203ENST00000355947 ANO6Q4KMQ2 910 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 ERCC4Q92889 916 aaPredicted RBP16.23■□□□□ 0.19
TRIM4-203ENST00000355947 PPRC1Q5VV67 1664 aaKnown RBP16.23■□□□□ 0.19
TRIM4-203ENST00000355947 ADGRB1O14514 1584 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 CNTROBQ8N137 903 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 SLC52A1Q9NWF4 448 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
TRIM4-203ENST00000355947 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
TRIM4-203ENST00000355947 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
TRIM4-203ENST00000355947 PA2G4Q9UQ80 394 aaKnown RBP16.22■□□□□ 0.19
TRIM4-203ENST00000355947 DMTNQ08495 405 aa16.22■□□□□ 0.19
TRIM4-203ENST00000355947 FMNL2Q96PY5 1086 aa16.22■□□□□ 0.19
TRIM4-203ENST00000355947 DNAJC25Q9H1X3 360 aa16.22■□□□□ 0.19
TRIM4-203ENST00000355947 PIK3R4Q99570 1358 aa16.22■□□□□ 0.19
TRIM4-203ENST00000355947 MAP3K11Q16584 847 aa16.21■□□□□ 0.19
TRIM4-203ENST00000355947 TCHHQ07283 1943 aa16.21■□□□□ 0.19
TRIM4-203ENST00000355947 GORABQ5T7V8 394 aa16.21■□□□□ 0.19
TRIM4-203ENST00000355947 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
TRIM4-203ENST00000355947 PUS7Q96PZ0 661 aaKnown RBP16.21■□□□□ 0.19
TRIM4-203ENST00000355947 POGZQ7Z3K3 1410 aa16.21■□□□□ 0.19
TRIM4-203ENST00000355947 PTH1RQ03431 593 aa16.21■□□□□ 0.18
TRIM4-203ENST00000355947 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.18
TRIM4-203ENST00000355947 RHPN1Q8TCX5 695 aa16.21■□□□□ 0.18
TRIM4-203ENST00000355947 CYP46A1Q9Y6A2 500 aa16.21■□□□□ 0.18
TRIM4-203ENST00000355947 ZBTB22O15209 634 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 IFIT2P09913 472 aaKnown RBP16.2■□□□□ 0.18
TRIM4-203ENST00000355947 ATP8B2P98198 1209 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 CCDC112Q8NEF3 446 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 LRRC2Q9BYS8 371 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 PNPLA6Q8IY17 1366 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
TRIM4-203ENST00000355947 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
TRIM4-203ENST00000355947 UVSSAQ2YD98 709 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 GOLGA6L19H0YKK7 550 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 ZKSCAN1P17029 563 aaPredicted RBP16.2■□□□□ 0.18
TRIM4-203ENST00000355947 KRT85P78386 507 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 CDC37L1Q7L3B6 337 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 SPATA32Q96LK8 384 aa16.2■□□□□ 0.18
TRIM4-203ENST00000355947 CCDC8Q9H0W5 538 aaPredicted RBP16.2■□□□□ 0.18
TRIM4-203ENST00000355947 NBPF7P0C2Y1 421 aaPredicted RBP16.19■□□□□ 0.18
TRIM4-203ENST00000355947 TYRO3Q06418 890 aa16.19■□□□□ 0.18
TRIM4-203ENST00000355947 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
TRIM4-203ENST00000355947 CDK11BP21127 795 aaKnown RBP16.19■□□□□ 0.18
TRIM4-203ENST00000355947 HSPA4P34932 840 aa16.19■□□□□ 0.18
TRIM4-203ENST00000355947 ARID5BQ14865 1188 aa16.19■□□□□ 0.18
TRIM4-203ENST00000355947 C9orf78Q9NZ63 289 aaPredicted RBP16.19■□□□□ 0.18
TRIM4-203ENST00000355947 BECN2A8MW95 431 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 H3BQV1 296 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 IFFO2Q5TF58 517 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 KIAA1524Q8TCG1 905 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 ZFYVE9O95405 1425 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 LETM1O95202 739 aaPredicted RBP16.18■□□□□ 0.18
TRIM4-203ENST00000355947 ANAPC15P60006 121 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 TTC6Q86TZ1 520 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 ADGRB3O60242 1522 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 VGLL3A8MV65 326 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 GUCY1B3Q02153 619 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 CLIP2Q9UDT6 1046 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 KIAA1210Q9ULL0 1709 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 ABCA9Q8IUA7 1624 aa16.18■□□□□ 0.18
TRIM4-203ENST00000355947 MAP3K19Q56UN5 1328 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 BOLA2Q9H3K6 86 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 NDUFB9Q9Y6M9 179 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 COL9A3Q14050 684 aaPredicted RBP16.17■□□□□ 0.18
TRIM4-203ENST00000355947 USP44Q9H0E7 712 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 ARHGEF40Q8TER5 1519 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 SGSM2O43147 1006 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 ZNF165P49910 485 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 LMOD2Q6P5Q4 547 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 AACSQ86V21 672 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 MTMR6Q9Y217 621 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 ABCC3O15438 1527 aa16.17■□□□□ 0.18
TRIM4-203ENST00000355947 RPAP1Q9BWH6 1393 aaPredicted RBP16.16■□□□□ 0.18
TRIM4-203ENST00000355947 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
TRIM4-203ENST00000355947 ME3Q16798 604 aa16.16■□□□□ 0.18
TRIM4-203ENST00000355947 CLASRPQ8N2M8 674 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms