RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 CCDC173Q0VFZ6 552 aa18.16■□□□□ 0.5
STRN3-201ENST00000355683 RHPN1Q8TCX5 695 aa18.16■□□□□ 0.5
STRN3-201ENST00000355683 PIBF1Q8WXW3 757 aa18.16■□□□□ 0.5
STRN3-201ENST00000355683 ABCA6Q8N139 1617 aa18.16■□□□□ 0.5
STRN3-201ENST00000355683 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
STRN3-201ENST00000355683 UQCRHLA0A096LP55 91 aa18.15■□□□□ 0.5
STRN3-201ENST00000355683 UQCRHP07919 91 aa18.15■□□□□ 0.5
STRN3-201ENST00000355683 UBE3BQ7Z3V4 1068 aa18.15■□□□□ 0.5
STRN3-201ENST00000355683 SDF4Q9BRK5 362 aa18.15■□□□□ 0.5
STRN3-201ENST00000355683 RBSNQ9H1K0 784 aa18.15■□□□□ 0.5
STRN3-201ENST00000355683 CIZ1Q9ULV3 898 aaPredicted RBP18.15■□□□□ 0.5
STRN3-201ENST00000355683 NUTM2BA6NNL0 878 aaPredicted RBP18.15■□□□□ 0.5
STRN3-201ENST00000355683 NUTM2EB1AL46 878 aaPredicted RBP18.15■□□□□ 0.5
STRN3-201ENST00000355683 PES1O00541 588 aaKnown RBP18.15■□□□□ 0.5
STRN3-201ENST00000355683 GTF2E1P29083 439 aaPredicted RBP18.15■□□□□ 0.5
STRN3-201ENST00000355683 RAB3GAP1Q15042 981 aa18.15■□□□□ 0.5
STRN3-201ENST00000355683 NUTM2AQ8IVF1 878 aaPredicted RBP18.15■□□□□ 0.5
STRN3-201ENST00000355683 ATP6V1DQ9Y5K8 247 aa18.15■□□□□ 0.5
STRN3-201ENST00000355683 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
STRN3-201ENST00000355683 RRP9O43818 475 aaKnown RBP18.15■□□□□ 0.5
STRN3-201ENST00000355683 ANTXR1Q9H6X2 564 aa18.14■□□□□ 0.49
STRN3-201ENST00000355683 INO80Q9ULG1 1556 aaPredicted RBP18.14■□□□□ 0.49
STRN3-201ENST00000355683 GADD45BO75293 160 aaPredicted RBP18.14■□□□□ 0.49
STRN3-201ENST00000355683 ESYT1Q9BSJ8 1104 aa18.14■□□□□ 0.49
STRN3-201ENST00000355683 BLOC1S2Q6QNY1 142 aa18.14■□□□□ 0.49
STRN3-201ENST00000355683 FAM177A1Q8N128 213 aaPredicted RBP18.14■□□□□ 0.49
STRN3-201ENST00000355683 ZSCAN30Q86W11 494 aa18.13■□□□□ 0.49
STRN3-201ENST00000355683 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.13■□□□□ 0.49
STRN3-201ENST00000355683 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
STRN3-201ENST00000355683 EFCAB6Q5THR3 1501 aa18.13■□□□□ 0.49
STRN3-201ENST00000355683 SASS6Q6UVJ0 657 aa18.13■□□□□ 0.49
STRN3-201ENST00000355683 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
STRN3-201ENST00000355683 KIF1BPQ96EK5 621 aa18.13■□□□□ 0.49
STRN3-201ENST00000355683 DNM1Q05193 864 aaKnown RBP18.12■□□□□ 0.49
STRN3-201ENST00000355683 RNF20Q5VTR2 975 aa18.12■□□□□ 0.49
STRN3-201ENST00000355683 IL16Q14005 1332 aa18.12■□□□□ 0.49
STRN3-201ENST00000355683 GJB2P29033 226 aa18.12■□□□□ 0.49
STRN3-201ENST00000355683 TNNT3P45378 269 aaPredicted RBP18.12■□□□□ 0.49
STRN3-201ENST00000355683 CADPS2Q86UW7 1296 aa18.12■□□□□ 0.49
STRN3-201ENST00000355683 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
STRN3-201ENST00000355683 IGSF3O75054 1194 aa18.11■□□□□ 0.49
STRN3-201ENST00000355683 GPTP24298 496 aa18.11■□□□□ 0.49
STRN3-201ENST00000355683 HSP90AA4PQ58FG1 418 aa18.11■□□□□ 0.49
STRN3-201ENST00000355683 TOM1L2Q6ZVM7 507 aa18.11■□□□□ 0.49
STRN3-201ENST00000355683 WDR33Q9C0J8 1336 aaKnown RBP18.11■□□□□ 0.49
STRN3-201ENST00000355683 MBD3O95983 291 aa18.11■□□□□ 0.49
STRN3-201ENST00000355683 CCDC144CPQ8IYA2 1237 aa18.11■□□□□ 0.49
STRN3-201ENST00000355683 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
STRN3-201ENST00000355683 ORAI2Q96SN7 254 aa18.1■□□□□ 0.49
STRN3-201ENST00000355683 KLHL40Q2TBA0 621 aa18.1■□□□□ 0.49
STRN3-201ENST00000355683 NSFL1CQ9UNZ2 370 aaKnown RBP18.1■□□□□ 0.49
STRN3-201ENST00000355683 TRPM2O94759 1503 aa18.1■□□□□ 0.49
STRN3-201ENST00000355683 MAP3K4Q9Y6R4 1608 aa18.1■□□□□ 0.49
STRN3-201ENST00000355683 CLCN1P35523 988 aa18.1■□□□□ 0.49
STRN3-201ENST00000355683 CABP4P57796 275 aa18.1■□□□□ 0.49
STRN3-201ENST00000355683 HSP90AB4PQ58FF6 505 aa18.1■□□□□ 0.49
STRN3-201ENST00000355683 ERCC4Q92889 916 aaPredicted RBP18.1■□□□□ 0.49
STRN3-201ENST00000355683 METP08581 1390 aa18.1■□□□□ 0.49
STRN3-201ENST00000355683 ME1P48163 572 aa18.09■□□□□ 0.49
STRN3-201ENST00000355683 SLC4A8Q2Y0W8 1093 aa18.09■□□□□ 0.49
STRN3-201ENST00000355683 TTLL5Q6EMB2 1281 aa18.09■□□□□ 0.49
STRN3-201ENST00000355683 BIN1O00499 593 aa18.09■□□□□ 0.49
STRN3-201ENST00000355683 CSPP1Q1MSJ5 1256 aa18.09■□□□□ 0.49
STRN3-201ENST00000355683 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
STRN3-201ENST00000355683 CCDC129Q6ZRS4 1044 aa18.09■□□□□ 0.49
STRN3-201ENST00000355683 TET3O43151 1660 aa18.09■□□□□ 0.49
STRN3-201ENST00000355683 ARHGAP31Q2M1Z3 1444 aa18.09■□□□□ 0.49
STRN3-201ENST00000355683 A0A087WZG4 1122 aa18.08■□□□□ 0.49
STRN3-201ENST00000355683 COPS6Q7L5N1 327 aa18.08■□□□□ 0.49
STRN3-201ENST00000355683 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.49
STRN3-201ENST00000355683 ARHGAP45Q92619 1136 aa18.08■□□□□ 0.49
STRN3-201ENST00000355683 CHMLP26374 656 aa18.08■□□□□ 0.49
STRN3-201ENST00000355683 RBM25P49756 843 aaKnown RBP18.08■□□□□ 0.49
STRN3-201ENST00000355683 AK2P54819 239 aa18.08■□□□□ 0.48
STRN3-201ENST00000355683 TNMDQ9H2S6 317 aa18.08■□□□□ 0.48
STRN3-201ENST00000355683 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
STRN3-201ENST00000355683 CCDC39Q9UFE4 941 aa18.08■□□□□ 0.48
STRN3-201ENST00000355683 SPATA32Q96LK8 384 aa18.07■□□□□ 0.48
STRN3-201ENST00000355683 FAM227BQ96M60 508 aa18.07■□□□□ 0.48
STRN3-201ENST00000355683 TMX1Q9H3N1 280 aa18.07■□□□□ 0.48
STRN3-201ENST00000355683 CEP152O94986 1710 aa18.07■□□□□ 0.48
STRN3-201ENST00000355683 GOLIM4O00461 696 aa18.07■□□□□ 0.48
STRN3-201ENST00000355683 CHL1O00533 1208 aa18.07■□□□□ 0.48
STRN3-201ENST00000355683 TMEM63CQ9P1W3 806 aa18.07■□□□□ 0.48
STRN3-201ENST00000355683 MEX3CQ5U5Q3 659 aaKnown RBP18.06■□□□□ 0.48
STRN3-201ENST00000355683 KRT28Q7Z3Y7 464 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 RASSF8Q8NHQ8 419 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 STX6O43752 255 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 TPM2P07951 284 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 IL17REQ8NFR9 667 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 UBAP1LF5GYI3 381 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 RAD21O60216 631 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 PDE4CQ08493 712 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 HOMER1Q86YM7 354 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 TRMT1Q9NXH9 659 aaKnown RBP18.06■□□□□ 0.48
STRN3-201ENST00000355683 HTATSF1O43719 755 aaKnown RBP18.06■□□□□ 0.48
STRN3-201ENST00000355683 XAGE3Q8WTP9 111 aa18.06■□□□□ 0.48
STRN3-201ENST00000355683 UNC13BO14795 1591 aa18.05■□□□□ 0.48
STRN3-201ENST00000355683 NSD2O96028 1365 aa18.05■□□□□ 0.48
STRN3-201ENST00000355683 GLRX3O76003 335 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms