RNA–Protein interactions for RNA: ENST00000355327.7

THSD4-202, Transcript of thrombospondin type 1 domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene THSD4, Length 9,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-202ENST00000355327 K7ELQ4 463 aaPredicted RBP16.13■□□□□ 0.17
THSD4-202ENST00000355327 LUC7L3O95232 432 aaKnown RBP16.13■□□□□ 0.17
THSD4-202ENST00000355327 SYF2O95926 243 aaKnown RBP16.13■□□□□ 0.17
THSD4-202ENST00000355327 CCDC129Q6ZRS4 1044 aa16.13■□□□□ 0.17
THSD4-202ENST00000355327 LRRC45Q96CN5 670 aa16.13■□□□□ 0.17
THSD4-202ENST00000355327 OGFRQ9NZT2 677 aa16.13■□□□□ 0.17
THSD4-202ENST00000355327 SMIM24O75264 130 aa16.13■□□□□ 0.17
THSD4-202ENST00000355327 CACNA2D4Q7Z3S7 1137 aa16.13■□□□□ 0.17
THSD4-202ENST00000355327 KDM4AO75164 1064 aa16.13■□□□□ 0.17
THSD4-202ENST00000355327 G3BP1Q13283 466 aaKnown RBP eCLIP16.13■□□□□ 0.17
THSD4-202ENST00000355327 NUB1Q9Y5A7 615 aa16.13■□□□□ 0.17
THSD4-202ENST00000355327 CEP162Q5TB80 1403 aa16.13■□□□□ 0.17
THSD4-202ENST00000355327 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
THSD4-202ENST00000355327 BAZ1BQ9UIG0 1483 aaKnown RBP16.13■□□□□ 0.17
THSD4-202ENST00000355327 SSX2IPQ9Y2D8 614 aa16.13■□□□□ 0.17
THSD4-202ENST00000355327 RNF10Q8N5U6 811 aaKnown RBP16.12■□□□□ 0.17
THSD4-202ENST00000355327 ARL1P40616 181 aaPredicted RBP16.12■□□□□ 0.17
THSD4-202ENST00000355327 CAMK4Q16566 473 aa16.12■□□□□ 0.17
THSD4-202ENST00000355327 PPM1FP49593 454 aaPredicted RBP16.12■□□□□ 0.17
THSD4-202ENST00000355327 RASAL2Q9UJF2 1139 aa16.12■□□□□ 0.17
THSD4-202ENST00000355327 ATP2A3Q93084 1043 aa16.12■□□□□ 0.17
THSD4-202ENST00000355327 MATR3P43243 847 aaKnown RBP eCLIP16.12■□□□□ 0.17
THSD4-202ENST00000355327 ARHGAP25P42331 645 aa16.12■□□□□ 0.17
THSD4-202ENST00000355327 TUBB4BP68371 445 aa16.12■□□□□ 0.17
THSD4-202ENST00000355327 PRPF4BQ13523 1007 aaKnown RBP16.12■□□□□ 0.17
THSD4-202ENST00000355327 INTS8Q75QN2 995 aaKnown RBP16.12■□□□□ 0.17
THSD4-202ENST00000355327 ERCC5P28715 1186 aaPredicted RBP16.11■□□□□ 0.17
THSD4-202ENST00000355327 RAP1GDS1P52306 607 aa16.11■□□□□ 0.17
THSD4-202ENST00000355327 CIZ1Q9ULV3 898 aaPredicted RBP16.11■□□□□ 0.17
THSD4-202ENST00000355327 CCDC65Q8IXS2 484 aa16.11■□□□□ 0.17
THSD4-202ENST00000355327 UIMC1Q96RL1 719 aa16.11■□□□□ 0.17
THSD4-202ENST00000355327 CCDC12Q8WUD4 166 aaPredicted RBP16.11■□□□□ 0.17
THSD4-202ENST00000355327 SLU7O95391 586 aaKnown RBP16.1■□□□□ 0.17
THSD4-202ENST00000355327 ALDH3A1P30838 453 aa16.1■□□□□ 0.17
THSD4-202ENST00000355327 BMP2KQ9NSY1 1161 aaPredicted RBP16.1■□□□□ 0.17
THSD4-202ENST00000355327 SAFB2Q14151 953 aaKnown RBP eCLIP16.1■□□□□ 0.17
THSD4-202ENST00000355327 TRIM22Q8IYM9 498 aa16.1■□□□□ 0.17
THSD4-202ENST00000355327 SEC62Q99442 399 aaKnown RBP16.1■□□□□ 0.17
THSD4-202ENST00000355327 YEATS4O95619 227 aa16.1■□□□□ 0.17
THSD4-202ENST00000355327 CSB-PGBD3P0DP91 1061 aa16.1■□□□□ 0.17
THSD4-202ENST00000355327 KIAA0753Q2KHM9 967 aa16.1■□□□□ 0.17
THSD4-202ENST00000355327 FERMT1Q9BQL6 677 aa16.1■□□□□ 0.17
THSD4-202ENST00000355327 GIMAP4Q9NUV9 329 aa16.1■□□□□ 0.17
THSD4-202ENST00000355327 KANK1Q14678 1352 aa16.1■□□□□ 0.17
THSD4-202ENST00000355327 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
THSD4-202ENST00000355327 INF2Q27J81 1249 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 ZSWIM4Q9H7M6 989 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 LARP1BQ659C4 914 aaKnown RBP16.09■□□□□ 0.17
THSD4-202ENST00000355327 SMARCC2Q8TAQ2 1214 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 SELENOSQ9BQE4 189 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 INPP1P49441 399 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 CCDC40Q4G0X9 1142 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 ANKRD24Q8TF21 1146 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 VIMP08670 466 aaKnown RBP16.09■□□□□ 0.17
THSD4-202ENST00000355327 HIP1O00291 1037 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 CFAP157Q5JU67 520 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 TRIM68Q6AZZ1 485 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 TMED1Q13445 227 aa16.09■□□□□ 0.17
THSD4-202ENST00000355327 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.17
THSD4-202ENST00000355327 CTAGE9A4FU28 777 aa16.08■□□□□ 0.17
THSD4-202ENST00000355327 MUM1Q2TAK8 710 aa16.08■□□□□ 0.17
THSD4-202ENST00000355327 WDR78Q5VTH9 848 aa16.08■□□□□ 0.16
THSD4-202ENST00000355327 CLCN1P35523 988 aa16.08■□□□□ 0.16
THSD4-202ENST00000355327 PCYT1AP49585 367 aa16.08■□□□□ 0.16
THSD4-202ENST00000355327 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.16
THSD4-202ENST00000355327 MRPS9P82933 396 aaKnown RBP16.08■□□□□ 0.16
THSD4-202ENST00000355327 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
THSD4-202ENST00000355327 CCDC172P0C7W6 258 aa16.08■□□□□ 0.16
THSD4-202ENST00000355327 SF3B2Q13435 895 aaKnown RBP16.08■□□□□ 0.16
THSD4-202ENST00000355327 MCUR1Q96AQ8 359 aa16.08■□□□□ 0.16
THSD4-202ENST00000355327 ANO10Q9NW15 660 aa16.08■□□□□ 0.16
THSD4-202ENST00000355327 CCDC63Q8NA47 563 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 SLC4A8Q2Y0W8 1093 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 GOLGA1Q92805 767 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 ABTB1Q969K4 478 aaPredicted RBP16.07■□□□□ 0.16
THSD4-202ENST00000355327 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
THSD4-202ENST00000355327 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
THSD4-202ENST00000355327 ADCY5O95622 1261 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 SLC3A2P08195 630 aaKnown RBP16.07■□□□□ 0.16
THSD4-202ENST00000355327 PIP4K2BP78356 416 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 GKAP1Q5VSY0 366 aaPredicted RBP16.07■□□□□ 0.16
THSD4-202ENST00000355327 OPHN1O60890 802 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 PDCD2Q16342 344 aaPredicted RBP16.07■□□□□ 0.16
THSD4-202ENST00000355327 WASHC4Q2M389 1173 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 EIF2AQ9BY44 585 aaKnown RBP16.07■□□□□ 0.16
THSD4-202ENST00000355327 NLRP5P59047 1200 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
THSD4-202ENST00000355327 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
THSD4-202ENST00000355327 ARHGEF2Q92974 986 aaKnown RBP16.06■□□□□ 0.16
THSD4-202ENST00000355327 THEGQ9P2T0 379 aa16.06■□□□□ 0.16
THSD4-202ENST00000355327 GOLGA4Q13439 2230 aaKnown RBP16.06■□□□□ 0.16
THSD4-202ENST00000355327 SPECC1L-ADORA2AF8WAN1 911 aa16.06■□□□□ 0.16
THSD4-202ENST00000355327 FGFR1OPO95684 399 aaKnown RBP16.06■□□□□ 0.16
THSD4-202ENST00000355327 CCDC144CPQ8IYA2 1237 aa16.06■□□□□ 0.16
THSD4-202ENST00000355327 CTAGE5O15320 804 aa16.06■□□□□ 0.16
THSD4-202ENST00000355327 MAN1A2O60476 641 aa16.06■□□□□ 0.16
THSD4-202ENST00000355327 ACTN2P35609 894 aa16.06■□□□□ 0.16
THSD4-202ENST00000355327 IGSF3O75054 1194 aa16.06■□□□□ 0.16
THSD4-202ENST00000355327 GNG11P61952 73 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms