RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 SRCIN1Q9C0H9 1055 aa16.79■□□□□ 0.28
EBF3-201ENST00000355311 SETD1AO15047 1707 aaKnown RBP16.79■□□□□ 0.28
EBF3-201ENST00000355311 PPFIA3O75145 1194 aa16.78■□□□□ 0.28
EBF3-201ENST00000355311 GNAI3P08754 354 aa16.78■□□□□ 0.28
EBF3-201ENST00000355311 SIRT1Q96EB6 747 aa16.78■□□□□ 0.28
EBF3-201ENST00000355311 C9orf78Q9NZ63 289 aaPredicted RBP16.78■□□□□ 0.28
EBF3-201ENST00000355311 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
EBF3-201ENST00000355311 SYCE3A1L190 88 aa16.77■□□□□ 0.28
EBF3-201ENST00000355311 CCDC8Q9H0W5 538 aaPredicted RBP16.77■□□□□ 0.28
EBF3-201ENST00000355311 CHMP3Q9Y3E7 222 aa16.77■□□□□ 0.28
EBF3-201ENST00000355311 CHGBP05060 677 aa16.77■□□□□ 0.28
EBF3-201ENST00000355311 KIAA0232Q92628 1395 aa16.77■□□□□ 0.27
EBF3-201ENST00000355311 PLEKHG1Q9ULL1 1385 aa16.77■□□□□ 0.27
EBF3-201ENST00000355311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.77■□□□□ 0.27
EBF3-201ENST00000355311 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.27
EBF3-201ENST00000355311 PRDM4Q9UKN5 801 aa16.77■□□□□ 0.27
EBF3-201ENST00000355311 CHRNA2Q15822 529 aa16.76■□□□□ 0.27
EBF3-201ENST00000355311 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
EBF3-201ENST00000355311 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
EBF3-201ENST00000355311 RHPN1Q8TCX5 695 aa16.76■□□□□ 0.27
EBF3-201ENST00000355311 EDC3Q96F86 508 aaKnown RBP16.76■□□□□ 0.27
EBF3-201ENST00000355311 ZHX1Q9UKY1 873 aaPredicted RBP16.76■□□□□ 0.27
EBF3-201ENST00000355311 NASPP49321 788 aaPredicted RBP16.75■□□□□ 0.27
EBF3-201ENST00000355311 LMBRD1Q9NUN5 540 aa16.75■□□□□ 0.27
EBF3-201ENST00000355311 TTC21AQ8NDW8 1320 aa16.75■□□□□ 0.27
EBF3-201ENST00000355311 TPM2P07951 284 aa16.75■□□□□ 0.27
EBF3-201ENST00000355311 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
EBF3-201ENST00000355311 RASEFQ8IZ41 740 aa16.75■□□□□ 0.27
EBF3-201ENST00000355311 MAP3K5Q99683 1374 aa16.74■□□□□ 0.27
EBF3-201ENST00000355311 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
EBF3-201ENST00000355311 NLRP2Q9NX02 1062 aa16.74■□□□□ 0.27
EBF3-201ENST00000355311 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
EBF3-201ENST00000355311 FER1L4A9Z1Z3 1794 aa16.74■□□□□ 0.27
EBF3-201ENST00000355311 GADD45BO75293 160 aaPredicted RBP16.74■□□□□ 0.27
EBF3-201ENST00000355311 RBSNQ9H1K0 784 aa16.74■□□□□ 0.27
EBF3-201ENST00000355311 CIZ1Q9ULV3 898 aaPredicted RBP16.74■□□□□ 0.27
EBF3-201ENST00000355311 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
EBF3-201ENST00000355311 C3P01024 1663 aa16.73■□□□□ 0.27
EBF3-201ENST00000355311 GCP02774 474 aa16.73■□□□□ 0.27
EBF3-201ENST00000355311 MSNP26038 577 aaKnown RBP16.73■□□□□ 0.27
EBF3-201ENST00000355311 PLCB2Q00722 1185 aa16.73■□□□□ 0.27
EBF3-201ENST00000355311 ZSCAN23Q3MJ62 389 aa16.73■□□□□ 0.27
EBF3-201ENST00000355311 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
EBF3-201ENST00000355311 GOLGB1Q14789 3259 aaKnown RBP16.73■□□□□ 0.27
EBF3-201ENST00000355311 TMEM63CQ9P1W3 806 aa16.72■□□□□ 0.27
EBF3-201ENST00000355311 TECPR2O15040 1411 aa16.72■□□□□ 0.27
EBF3-201ENST00000355311 ITSN1Q15811 1721 aa16.72■□□□□ 0.27
EBF3-201ENST00000355311 C1orf141Q5JVX7 400 aa16.72■□□□□ 0.27
EBF3-201ENST00000355311 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
EBF3-201ENST00000355311 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
EBF3-201ENST00000355311 ANKRD24Q8TF21 1146 aa16.71■□□□□ 0.27
EBF3-201ENST00000355311 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.26
EBF3-201ENST00000355311 ZSCAN30Q86W11 494 aa16.71■□□□□ 0.26
EBF3-201ENST00000355311 BOLA2Q9H3K6 86 aa16.71■□□□□ 0.26
EBF3-201ENST00000355311 TLR7Q9NYK1 1049 aaKnown RBP16.71■□□□□ 0.26
EBF3-201ENST00000355311 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
EBF3-201ENST00000355311 PTCD1O75127 700 aaKnown RBP16.7■□□□□ 0.26
EBF3-201ENST00000355311 NUCB2P80303 420 aa16.7■□□□□ 0.26
EBF3-201ENST00000355311 KCNJ4P48050 445 aa16.7■□□□□ 0.26
EBF3-201ENST00000355311 PTH1RQ03431 593 aa16.7■□□□□ 0.26
EBF3-201ENST00000355311 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
EBF3-201ENST00000355311 IP6K1Q92551 441 aa16.7■□□□□ 0.26
EBF3-201ENST00000355311 DNAJC5Q9H3Z4 198 aa16.7■□□□□ 0.26
EBF3-201ENST00000355311 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
EBF3-201ENST00000355311 MON2Q7Z3U7 1717 aa16.69■□□□□ 0.26
EBF3-201ENST00000355311 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
EBF3-201ENST00000355311 SLFNL1Q499Z3 407 aa16.69■□□□□ 0.26
EBF3-201ENST00000355311 BEND3Q5T5X7 828 aa16.69■□□□□ 0.26
EBF3-201ENST00000355311 PRPF40BQ6NWY9 871 aaKnown RBP16.69■□□□□ 0.26
EBF3-201ENST00000355311 NFATC2IPQ8NCF5 419 aa16.69■□□□□ 0.26
EBF3-201ENST00000355311 LARGE1O95461 756 aa16.69■□□□□ 0.26
EBF3-201ENST00000355311 FAM173BQ6P4H8 233 aa16.69■□□□□ 0.26
EBF3-201ENST00000355311 AACSQ86V21 672 aa16.69■□□□□ 0.26
EBF3-201ENST00000355311 ANKLE2Q86XL3 938 aa16.69■□□□□ 0.26
EBF3-201ENST00000355311 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
EBF3-201ENST00000355311 FOSBP53539 338 aa16.68■□□□□ 0.26
EBF3-201ENST00000355311 TSC1Q92574 1164 aa16.68■□□□□ 0.26
EBF3-201ENST00000355311 OFD1O75665 1012 aa16.68■□□□□ 0.26
EBF3-201ENST00000355311 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
EBF3-201ENST00000355311 KLHL40Q2TBA0 621 aa16.68■□□□□ 0.26
EBF3-201ENST00000355311 FAM227BQ96M60 508 aa16.68■□□□□ 0.26
EBF3-201ENST00000355311 KDRP35968 1356 aa16.68■□□□□ 0.26
EBF3-201ENST00000355311 MCCP23508 829 aa16.68■□□□□ 0.26
EBF3-201ENST00000355311 STK3Q13188 491 aa16.68■□□□□ 0.26
EBF3-201ENST00000355311 FERMT3Q86UX7 667 aa16.68■□□□□ 0.26
EBF3-201ENST00000355311 UQCRHLA0A096LP55 91 aa16.67■□□□□ 0.26
EBF3-201ENST00000355311 UQCRHP07919 91 aa16.67■□□□□ 0.26
EBF3-201ENST00000355311 SKOR2Q2VWA4 1001 aaPredicted RBP16.67■□□□□ 0.26
EBF3-201ENST00000355311 TAF6LQ9Y6J9 622 aa16.67■□□□□ 0.26
EBF3-201ENST00000355311 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
EBF3-201ENST00000355311 CCDC83Q8IWF9 413 aa16.67■□□□□ 0.26
EBF3-201ENST00000355311 PI4K2BQ8TCG2 481 aa16.67■□□□□ 0.26
EBF3-201ENST00000355311 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
EBF3-201ENST00000355311 FIBPO43427 364 aa16.66■□□□□ 0.26
EBF3-201ENST00000355311 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
EBF3-201ENST00000355311 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
EBF3-201ENST00000355311 SALL3Q9BXA9 1300 aa16.66■□□□□ 0.26
EBF3-201ENST00000355311 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
EBF3-201ENST00000355311 DIAPH3Q9NSV4 1193 aa16.66■□□□□ 0.26
EBF3-201ENST00000355311 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms