RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ATG3Q9NT62 314 aa12.21□□□□□ -0.46
NPHP1-202ENST00000355301 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.46
NPHP1-202ENST00000355301 A0A0G2JS52 829 aa12.2□□□□□ -0.46
NPHP1-202ENST00000355301 MYT1Q01538 1121 aa12.2□□□□□ -0.46
NPHP1-202ENST00000355301 INTS3Q68E01 1043 aaKnown RBP12.2□□□□□ -0.46
NPHP1-202ENST00000355301 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
NPHP1-202ENST00000355301 SYTL4Q96C24 671 aaPredicted RBP12.2□□□□□ -0.46
NPHP1-202ENST00000355301 DDX21Q9NR30 783 aaKnown RBP eCLIP12.2□□□□□ -0.46
NPHP1-202ENST00000355301 USP16Q9Y5T5 823 aa12.2□□□□□ -0.46
NPHP1-202ENST00000355301 PTCD1O75127 700 aaKnown RBP12.19□□□□□ -0.46
NPHP1-202ENST00000355301 FKBP5Q13451 457 aaPredicted RBP12.19□□□□□ -0.46
NPHP1-202ENST00000355301 PDIA6Q15084 440 aa12.19□□□□□ -0.46
NPHP1-202ENST00000355301 PHAXQ9H814 394 aaKnown RBP12.19□□□□□ -0.46
NPHP1-202ENST00000355301 HYPKQ9NX55 129 aa12.19□□□□□ -0.46
NPHP1-202ENST00000355301 KAT6BQ8WYB5 2073 aa12.19□□□□□ -0.46
NPHP1-202ENST00000355301 PROSER3Q2NL68 480 aa12.19□□□□□ -0.46
NPHP1-202ENST00000355301 ZNF772Q68DY9 489 aaPredicted RBP12.19□□□□□ -0.46
NPHP1-202ENST00000355301 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
NPHP1-202ENST00000355301 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
NPHP1-202ENST00000355301 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
NPHP1-202ENST00000355301 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
NPHP1-202ENST00000355301 N4BP2Q86UW6 1770 aaPredicted RBP12.18□□□□□ -0.46
NPHP1-202ENST00000355301 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
NPHP1-202ENST00000355301 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-202ENST00000355301 ANXA1P04083 346 aa12.17□□□□□ -0.46
NPHP1-202ENST00000355301 ACSBG1Q96GR2 724 aa12.17□□□□□ -0.46
NPHP1-202ENST00000355301 F6X3S4 739 aa12.17□□□□□ -0.46
NPHP1-202ENST00000355301 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
NPHP1-202ENST00000355301 LRP10Q7Z4F1 713 aa12.17□□□□□ -0.46
NPHP1-202ENST00000355301 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-202ENST00000355301 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
NPHP1-202ENST00000355301 KCNQ2O43526 872 aa12.15□□□□□ -0.46
NPHP1-202ENST00000355301 EP400Q96L91 3159 aa12.15□□□□□ -0.46
NPHP1-202ENST00000355301 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
NPHP1-202ENST00000355301 ADCY9O60503 1353 aa12.15□□□□□ -0.46
NPHP1-202ENST00000355301 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
NPHP1-202ENST00000355301 SLC4A10Q6U841 1118 aa12.15□□□□□ -0.46
NPHP1-202ENST00000355301 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
NPHP1-202ENST00000355301 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
NPHP1-202ENST00000355301 PCDHB15Q9Y5E8 787 aa12.15□□□□□ -0.46
NPHP1-202ENST00000355301 KDM2BQ8NHM5 1336 aa12.14□□□□□ -0.47
NPHP1-202ENST00000355301 PI4KAP2A4QPH2 592 aa12.14□□□□□ -0.47
NPHP1-202ENST00000355301 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
NPHP1-202ENST00000355301 MYL6BP14649 208 aa12.14□□□□□ -0.47
NPHP1-202ENST00000355301 KSR2Q6VAB6 950 aa12.14□□□□□ -0.47
NPHP1-202ENST00000355301 PI4KAP1Q8N8J0 262 aa12.14□□□□□ -0.47
NPHP1-202ENST00000355301 DNAAF4Q8WXU2 420 aa12.14□□□□□ -0.47
NPHP1-202ENST00000355301 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
NPHP1-202ENST00000355301 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
NPHP1-202ENST00000355301 TJP1Q07157 1748 aa12.14□□□□□ -0.47
NPHP1-202ENST00000355301 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 STARD3NLO95772 234 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 NBPF14Q5TI25 921 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
NPHP1-202ENST00000355301 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 NBPF15Q8N660 670 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 SBF2Q86WG5 1849 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 ZNF831Q5JPB2 1677 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 BRWD3Q6RI45 1802 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 CENPQQ7L2Z9 268 aaPredicted RBP12.13□□□□□ -0.47
NPHP1-202ENST00000355301 COPS6Q7L5N1 327 aa12.13□□□□□ -0.47
NPHP1-202ENST00000355301 A1BGP04217 495 aa12.12□□□□□ -0.47
NPHP1-202ENST00000355301 FAM182BQ5T319 152 aa12.12□□□□□ -0.47
NPHP1-202ENST00000355301 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
NPHP1-202ENST00000355301 MAP3K2Q9Y2U5 619 aa12.12□□□□□ -0.47
NPHP1-202ENST00000355301 BTAF1O14981 1849 aa12.12□□□□□ -0.47
NPHP1-202ENST00000355301 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
NPHP1-202ENST00000355301 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
NPHP1-202ENST00000355301 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
NPHP1-202ENST00000355301 SIK1P57059 783 aa12.11□□□□□ -0.47
NPHP1-202ENST00000355301 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
NPHP1-202ENST00000355301 BEND3Q5T5X7 828 aa12.11□□□□□ -0.47
NPHP1-202ENST00000355301 IGHDP01880 384 aa12.11□□□□□ -0.47
NPHP1-202ENST00000355301 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
NPHP1-202ENST00000355301 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
NPHP1-202ENST00000355301 MEIS3Q99687 375 aa12.11□□□□□ -0.47
NPHP1-202ENST00000355301 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
NPHP1-202ENST00000355301 IBTKQ9P2D0 1353 aaPredicted RBP12.11□□□□□ -0.47
NPHP1-202ENST00000355301 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
NPHP1-202ENST00000355301 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
NPHP1-202ENST00000355301 RWDD1Q9H446 243 aaPredicted RBP12.1□□□□□ -0.47
NPHP1-202ENST00000355301 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 FAM196AQ6ZSG2 479 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 ARFGEF2Q9Y6D5 1785 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 ALDH1L1O75891 902 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 GNAI3P08754 354 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 RXRBP28702 533 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 LINS1Q8NG48 757 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 PLBD2Q8NHP8 589 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 USP44Q9H0E7 712 aa12.09□□□□□ -0.47
NPHP1-202ENST00000355301 RGS17Q9UGC6 210 aaPredicted RBP12.09□□□□□ -0.47
NPHP1-202ENST00000355301 COL5A3P25940 1745 aaPredicted RBP12.09□□□□□ -0.47
NPHP1-202ENST00000355301 RREB1Q92766 1687 aa12.08□□□□□ -0.47
NPHP1-202ENST00000355301 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.48
NPHP1-202ENST00000355301 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.48
NPHP1-202ENST00000355301 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
NPHP1-202ENST00000355301 C1orf115Q9H7X2 142 aa12.08□□□□□ -0.48
NPHP1-202ENST00000355301 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms