RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 ZNF790Q6PG37 636 aa13.57□□□□□ -0.24
NEIL1-201ENST00000355059 MAP3K2Q9Y2U5 619 aa13.57□□□□□ -0.24
NEIL1-201ENST00000355059 PHKG2P15735 406 aa13.57□□□□□ -0.24
NEIL1-201ENST00000355059 SKOR2Q2VWA4 1001 aaPredicted RBP13.57□□□□□ -0.24
NEIL1-201ENST00000355059 IL1RAPL2Q9NP60 686 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
NEIL1-201ENST00000355059 WDR17Q8IZU2 1322 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 ARID3AQ99856 593 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 IL16Q14005 1332 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 PCDH11XQ9BZA7 1347 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 PCDH11YQ9BZA8 1340 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 CHL1O00533 1208 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 TNS3Q68CZ2 1445 aa13.56□□□□□ -0.24
NEIL1-201ENST00000355059 GNAI2P04899 355 aa13.55□□□□□ -0.24
NEIL1-201ENST00000355059 SF3B2Q13435 895 aaKnown RBP13.55□□□□□ -0.24
NEIL1-201ENST00000355059 MEIS3Q99687 375 aa13.55□□□□□ -0.24
NEIL1-201ENST00000355059 PANK2Q9BZ23 570 aa13.55□□□□□ -0.24
NEIL1-201ENST00000355059 QTRT2Q9H974 415 aaKnown RBP13.55□□□□□ -0.24
NEIL1-201ENST00000355059 SRGAP3O43295 1099 aa13.55□□□□□ -0.24
NEIL1-201ENST00000355059 GNAI3P08754 354 aa13.55□□□□□ -0.24
NEIL1-201ENST00000355059 DNAAF4Q8WXU2 420 aa13.55□□□□□ -0.24
NEIL1-201ENST00000355059 USP16Q9Y5T5 823 aa13.55□□□□□ -0.24
NEIL1-201ENST00000355059 G3BP1Q13283 466 aaKnown RBP eCLIP13.55□□□□□ -0.24
NEIL1-201ENST00000355059 GRPEL1Q9HAV7 217 aa13.55□□□□□ -0.24
NEIL1-201ENST00000355059 CWF19L2Q2TBE0 894 aaKnown RBP13.54□□□□□ -0.24
NEIL1-201ENST00000355059 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
NEIL1-201ENST00000355059 ZFP91Q96JP5 570 aaPredicted RBP13.54□□□□□ -0.24
NEIL1-201ENST00000355059 WWC3Q9ULE0 1092 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 CD163L1Q9NR16 1453 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 SLC52A2Q9HAB3 445 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 ASAP1Q9ULH1 1129 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 CYP27B1O15528 508 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 SMARCA5O60264 1052 aaPredicted RBP13.54□□□□□ -0.24
NEIL1-201ENST00000355059 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
NEIL1-201ENST00000355059 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 LRRFIP2Q9Y608 721 aaKnown RBP13.54□□□□□ -0.24
NEIL1-201ENST00000355059 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 MST1RQ04912 1400 aa13.54□□□□□ -0.24
NEIL1-201ENST00000355059 CARD10Q9BWT7 1032 aa13.53□□□□□ -0.24
NEIL1-201ENST00000355059 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
NEIL1-201ENST00000355059 INTS3Q68E01 1043 aaKnown RBP13.53□□□□□ -0.24
NEIL1-201ENST00000355059 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
NEIL1-201ENST00000355059 A0A087WZG4 1122 aa13.52□□□□□ -0.24
NEIL1-201ENST00000355059 HDAC1Q13547 482 aaPredicted RBP13.52□□□□□ -0.24
NEIL1-201ENST00000355059 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.25
NEIL1-201ENST00000355059 CAVIN1Q6NZI2 390 aaKnown RBP13.52□□□□□ -0.25
NEIL1-201ENST00000355059 TNPO1Q92973 898 aaKnown RBP13.52□□□□□ -0.25
NEIL1-201ENST00000355059 REC8O95072 547 aa13.51□□□□□ -0.25
NEIL1-201ENST00000355059 XRCC6P12956 609 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEIL1-201ENST00000355059 ANKRD13DQ6ZTN6 518 aa13.51□□□□□ -0.25
NEIL1-201ENST00000355059 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
NEIL1-201ENST00000355059 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
NEIL1-201ENST00000355059 NEURL4Q96JN8 1562 aa13.51□□□□□ -0.25
NEIL1-201ENST00000355059 MAP4K4O95819 1239 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-201ENST00000355059 IFIT2P09913 472 aaKnown RBP13.51□□□□□ -0.25
NEIL1-201ENST00000355059 NASPP49321 788 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-201ENST00000355059 CCDC24Q8N4L8 307 aa13.51□□□□□ -0.25
NEIL1-201ENST00000355059 ANO2Q9NQ90 1003 aa13.51□□□□□ -0.25
NEIL1-201ENST00000355059 CDK12Q9NYV4 1490 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-201ENST00000355059 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
NEIL1-201ENST00000355059 HYPKQ9NX55 129 aa13.5□□□□□ -0.25
NEIL1-201ENST00000355059 AFF2P51816 1311 aa13.5□□□□□ -0.25
NEIL1-201ENST00000355059 SOS2Q07890 1332 aaPredicted RBP13.5□□□□□ -0.25
NEIL1-201ENST00000355059 ADAMTSL3P82987 1691 aa13.5□□□□□ -0.25
NEIL1-201ENST00000355059 TBC1D9Q6ZT07 1266 aa13.5□□□□□ -0.25
NEIL1-201ENST00000355059 USP31Q70CQ4 1352 aa13.5□□□□□ -0.25
NEIL1-201ENST00000355059 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.49□□□□□ -0.25
NEIL1-201ENST00000355059 SSFA2P28290 1259 aa13.49□□□□□ -0.25
NEIL1-201ENST00000355059 NUCB2P80303 420 aa13.49□□□□□ -0.25
NEIL1-201ENST00000355059 PROSER3Q2NL68 480 aa13.49□□□□□ -0.25
NEIL1-201ENST00000355059 NUCB1Q02818 461 aa13.49□□□□□ -0.25
NEIL1-201ENST00000355059 IPO4Q8TEX9 1081 aaKnown RBP13.49□□□□□ -0.25
NEIL1-201ENST00000355059 TRMT112Q9UI30 125 aaKnown RBP13.49□□□□□ -0.25
NEIL1-201ENST00000355059 MED14O60244 1454 aa13.49□□□□□ -0.25
NEIL1-201ENST00000355059 KIAA1211Q6ZU35 1233 aa13.48□□□□□ -0.25
NEIL1-201ENST00000355059 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
NEIL1-201ENST00000355059 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
NEIL1-201ENST00000355059 USP19O94966 1318 aa13.48□□□□□ -0.25
NEIL1-201ENST00000355059 ZPR1O75312 459 aa13.48□□□□□ -0.25
NEIL1-201ENST00000355059 PRPF40AO75400 957 aaKnown RBP13.48□□□□□ -0.25
NEIL1-201ENST00000355059 TSHZ3Q63HK5 1081 aa13.48□□□□□ -0.25
NEIL1-201ENST00000355059 UNC5CLQ8IV45 518 aa13.48□□□□□ -0.25
NEIL1-201ENST00000355059 G3V3G9 751 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 RABEP1Q15276 862 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 BMP2KLQ5H9B9 411 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 RNF214Q8ND24 703 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 AK7Q96M32 723 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 NEK4P51957 841 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 ZNF830Q96NB3 372 aaPredicted RBP13.47□□□□□ -0.25
NEIL1-201ENST00000355059 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 ESPNB1AK53 854 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 KCNQ2O43526 872 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
NEIL1-201ENST00000355059 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
NEIL1-201ENST00000355059 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms