RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 DOT1LQ8TEK3 1739 aa25.94■■□□□ 1.74
TRIM4-202ENST00000354241 KCPQ6ZWJ8 1503 aa25.94■■□□□ 1.74
TRIM4-202ENST00000354241 CCT4P50991 539 aaKnown RBP25.94■■□□□ 1.74
TRIM4-202ENST00000354241 FAM98CQ17RN3 349 aaKnown RBP25.94■■□□□ 1.74
TRIM4-202ENST00000354241 PROSER3Q2NL68 480 aa25.93■■□□□ 1.74
TRIM4-202ENST00000354241 RWDD1Q9H446 243 aaPredicted RBP25.93■■□□□ 1.74
TRIM4-202ENST00000354241 N4BP2Q86UW6 1770 aaPredicted RBP25.92■■□□□ 1.74
TRIM4-202ENST00000354241 PIGBQ92521 554 aa25.92■■□□□ 1.74
TRIM4-202ENST00000354241 USP16Q9Y5T5 823 aa25.92■■□□□ 1.74
TRIM4-202ENST00000354241 C1orf115Q9H7X2 142 aa25.92■■□□□ 1.74
TRIM4-202ENST00000354241 DDX21Q9NR30 783 aaKnown RBP eCLIP25.92■■□□□ 1.74
TRIM4-202ENST00000354241 HYPKQ9NX55 129 aa25.91■■□□□ 1.74
TRIM4-202ENST00000354241 PTCD1O75127 700 aaKnown RBP25.9■■□□□ 1.74
TRIM4-202ENST00000354241 PXDNLA1KZ92 1463 aa25.9■■□□□ 1.74
TRIM4-202ENST00000354241 SYTL4Q96C24 671 aaPredicted RBP25.9■■□□□ 1.74
TRIM4-202ENST00000354241 PDIA6Q15084 440 aa25.89■■□□□ 1.74
TRIM4-202ENST00000354241 MARCH10Q8NA82 808 aaPredicted RBP25.89■■□□□ 1.74
TRIM4-202ENST00000354241 AFF2P51816 1311 aa25.89■■□□□ 1.73
TRIM4-202ENST00000354241 BCL9O00512 1426 aa25.88■■□□□ 1.73
TRIM4-202ENST00000354241 MYL6BP14649 208 aa25.88■■□□□ 1.73
TRIM4-202ENST00000354241 ASAP1Q9ULH1 1129 aa25.88■■□□□ 1.73
TRIM4-202ENST00000354241 A0A0G2JS52 829 aa25.87■■□□□ 1.73
TRIM4-202ENST00000354241 MYT1Q01538 1121 aa25.87■■□□□ 1.73
TRIM4-202ENST00000354241 HDAC1Q13547 482 aaPredicted RBP25.87■■□□□ 1.73
TRIM4-202ENST00000354241 PI4KAP2A4QPH2 592 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 SKAP1Q86WV1 359 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 PI4KAP1Q8N8J0 262 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 MEIS3Q99687 375 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 PRIM1P49642 420 aaKnown RBP25.86■■□□□ 1.73
TRIM4-202ENST00000354241 ATG3Q9NT62 314 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 AIMP1Q12904 312 aaKnown RBP25.85■■□□□ 1.73
TRIM4-202ENST00000354241 DNAAF4Q8WXU2 420 aa25.85■■□□□ 1.73
TRIM4-202ENST00000354241 ADCY9O60503 1353 aa25.84■■□□□ 1.73
TRIM4-202ENST00000354241 PIP4K2AP48426 406 aaPredicted RBP25.84■■□□□ 1.73
TRIM4-202ENST00000354241 ACSBG1Q96GR2 724 aa25.84■■□□□ 1.73
TRIM4-202ENST00000354241 DDX58O95786 925 aaKnown RBP25.82■■□□□ 1.72
TRIM4-202ENST00000354241 RBM42Q9BTD8 480 aaKnown RBP25.82■■□□□ 1.72
TRIM4-202ENST00000354241 KSR2Q6VAB6 950 aa25.82■■□□□ 1.72
TRIM4-202ENST00000354241 MAP3K2Q9Y2U5 619 aa25.82■■□□□ 1.72
TRIM4-202ENST00000354241 THSD7AQ9UPZ6 1657 aa25.81■■□□□ 1.72
TRIM4-202ENST00000354241 SRCIN1Q9C0H9 1055 aa25.81■■□□□ 1.72
TRIM4-202ENST00000354241 XAGE3Q8WTP9 111 aa25.8■■□□□ 1.72
TRIM4-202ENST00000354241 GJD4Q96KN9 370 aaPredicted RBP25.8■■□□□ 1.72
TRIM4-202ENST00000354241 ERBB4Q15303 1308 aa25.8■■□□□ 1.72
TRIM4-202ENST00000354241 BEND3Q5T5X7 828 aa25.79■■□□□ 1.72
TRIM4-202ENST00000354241 COPS6Q7L5N1 327 aa25.79■■□□□ 1.72
TRIM4-202ENST00000354241 ATRNO75882 1429 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 LRP10Q7Z4F1 713 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 VSIG10Q8N0Z9 540 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 ATP10DQ9P241 1426 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 TRPC5Q9UL62 973 aaPredicted RBP25.78■■□□□ 1.72
TRIM4-202ENST00000354241 GNAI3P08754 354 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 A1BGP04217 495 aa25.77■■□□□ 1.72
TRIM4-202ENST00000354241 RIC3Q7Z5B4 369 aa25.77■■□□□ 1.72
TRIM4-202ENST00000354241 SIRT2Q8IXJ6 389 aa25.77■■□□□ 1.72
TRIM4-202ENST00000354241 TEX13AQ9BXU3 409 aaPredicted RBP25.76■■□□□ 1.72
TRIM4-202ENST00000354241 TSHZ2Q9NRE2 1034 aa25.76■■□□□ 1.72
TRIM4-202ENST00000354241 NBPF26B4DH59 902 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 RGS3P49796 1198 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 NBPF14Q5TI25 921 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 NBPF10Q6P3W6 841 aaKnown RBP25.76■■□□□ 1.71
TRIM4-202ENST00000354241 DNAJC10Q8IXB1 793 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 NBPF15Q8N660 670 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 PDZRN3Q9UPQ7 1066 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 GNAI2P04899 355 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 CEP85Q6P2H3 762 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 RPAP2Q8IXW5 612 aaPredicted RBP25.75■■□□□ 1.71
TRIM4-202ENST00000354241 SMC5Q8IY18 1101 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 ANKRD44Q8N8A2 993 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 USP44Q9H0E7 712 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 UBTFL1P0CB47 393 aaPredicted RBP25.73■■□□□ 1.71
TRIM4-202ENST00000354241 ARFGEF2Q9Y6D5 1785 aa25.73■■□□□ 1.71
TRIM4-202ENST00000354241 ANKRD13DQ6ZTN6 518 aa25.73■■□□□ 1.71
TRIM4-202ENST00000354241 STARD3NLO95772 234 aa25.72■■□□□ 1.71
TRIM4-202ENST00000354241 SLC4A9Q96Q91 983 aa25.72■■□□□ 1.71
TRIM4-202ENST00000354241 TJP1Q07157 1748 aa25.72■■□□□ 1.71
TRIM4-202ENST00000354241 KCNQ2O43526 872 aa25.71■■□□□ 1.71
TRIM4-202ENST00000354241 ALDH1L1O75891 902 aa25.71■■□□□ 1.71
TRIM4-202ENST00000354241 QTRT2Q9H974 415 aaKnown RBP25.71■■□□□ 1.71
TRIM4-202ENST00000354241 LINS1Q8NG48 757 aa25.71■■□□□ 1.71
TRIM4-202ENST00000354241 NEXNQ0ZGT2 675 aa25.7■■□□□ 1.7
TRIM4-202ENST00000354241 CWF19L2Q2TBE0 894 aaKnown RBP25.7■■□□□ 1.7
TRIM4-202ENST00000354241 GCC1Q96CN9 775 aa25.7■■□□□ 1.7
TRIM4-202ENST00000354241 LRRFIP2Q9Y608 721 aaKnown RBP25.7■■□□□ 1.7
TRIM4-202ENST00000354241 METTL22Q9BUU2 404 aaPredicted RBP25.69■■□□□ 1.7
TRIM4-202ENST00000354241 MYD88Q99836 296 aa25.69■■□□□ 1.7
TRIM4-202ENST00000354241 AFDNP55196 1824 aaKnown RBP25.68■■□□□ 1.7
TRIM4-202ENST00000354241 PLBD2Q8NHP8 589 aa25.68■■□□□ 1.7
TRIM4-202ENST00000354241 NBPF7P0C2Y1 421 aaPredicted RBP25.67■■□□□ 1.7
TRIM4-202ENST00000354241 TTLL7Q6ZT98 887 aa25.67■■□□□ 1.7
TRIM4-202ENST00000354241 C9orf78Q9NZ63 289 aaPredicted RBP25.67■■□□□ 1.7
TRIM4-202ENST00000354241 NUP188Q5SRE5 1749 aa25.67■■□□□ 1.7
TRIM4-202ENST00000354241 ONECUT3O60422 494 aaPredicted RBP25.67■■□□□ 1.7
TRIM4-202ENST00000354241 HMMRO75330 724 aa25.67■■□□□ 1.7
TRIM4-202ENST00000354241 SEPT12Q8IYM1 358 aa25.67■■□□□ 1.7
TRIM4-202ENST00000354241 ZNF330Q9Y3S2 320 aaPredicted RBP25.67■■□□□ 1.7
TRIM4-202ENST00000354241 PALLDQ8WX93 1383 aa25.66■■□□□ 1.7
TRIM4-202ENST00000354241 CYP19A1P11511 503 aaPredicted RBP25.66■■□□□ 1.7
TRIM4-202ENST00000354241 FAM182BQ5T319 152 aa25.66■■□□□ 1.7
TRIM4-202ENST00000354241 IGKV5-2P06315 115 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms